Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is ybgO [C]

Identifier: 238919063

GI number: 238919063

Start: 1128268

End: 1129335

Strand: Direct

Name: ybgO [C]

Synonym: NT01EI_1131

Alternate gene names: 238919063

Gene position: 1128268-1129335 (Clockwise)

Preceding gene: 238919062

Following gene: 238919064

Centisome position: 29.6

GC content: 58.43

Gene sequence:

>1068_bases
ATGAAAGGCCTAAGTATAAAACAGGCGCTTGTATTCACGCTGCTGCTGCTGGGGCTCTGCATCAGCCGTCAGGCATCCGC
GCTCTCCTGTCGGGAGGGCAGTAACGCAGGGAGCTGGGTACCCATTGGGAGTATTTATCAGCGCATCGATATCGGGCGGC
CGATTATCCTGTCTGCCGCCGACTTTACCGCCGGTAATCTGATTTGGCGCTCGCAGAACTTTAGCACCACCTTTACCTGC
TGGGATAACTGGAATACCGGAAGGGGAGAACATGCCTATATTTACTGGAATCCAAAGGATGCGTTTGGGAGCCTGCACCG
TTCACTGTCGGTTGGGGTCTCGATCAATGGTATCGACTATGATGCGATTAACATGAAACAGAGCGGCGGTCGGCCCAGCG
GCCCCGATCTGGGCGAGGGGACATCCAACAACGGCGGTGGTATCGCCAGATCGCGTACGGTCACCGTCAGCTATTCGGTG
TACATCAAGGCCACCGGCGTAACGCCGCCAGCGGGTAGTTTCCCGGCGCTGGGACTGCCATCGCTGTTTCAGATTGACGG
CGTGGGCGGCTTGGACGCGCGCCCCAACGGCAATTTTAACGCCTATATATCCGGGTTGGATAAGATCCAGGTGACCCACT
GCAACCCGCAGATCAGCGTGCTGGCGAATCATGGCAACAGTATCGATTTCGGTACGCTGAGCGCCACCGGTGCGCGTCCG
GGCGTTATCGCCCGCCAGATACCATTCAGTATCAAGGCGACGCTGCGCGGCGGAGAGTGCGGCGGGCAGCAGCTGCAGGC
CAGCTTCAGTACCCTGAGGGCGGACGTTGGCGATCGGTCGCTGATTCTGCCGGATACCAACCCGGGCGTGGGGATTTTCC
TGACAAAGGCGGGTGATACCAGCACTACACCGATCCCGTTGCAGAGTAATATCGATTTCGGCGGCCGACTGCAGGATAAG
CAGAATGAGGTGAGCGAGAACTTTACCGCCAACCTGAAATGGCTGACCAATCGGCCGACGGCGGGGCGCTTCCATGCGAC
GGCCAACGTCGACGTCACCTTTAAATAG

Upstream 100 bases:

>100_bases
GTGCACGCTGGTGCTGCCGTCCGATCTGTCGATGCGGAATACCACGGTGGGCTACCAGGAACTCTCTCTACCCTGTCAGA
TTCAATAAGGTGACGGATTA

Downstream 100 bases:

>100_bases
TCTGGTATGCAGTCTTGGTGCGCAGTGCGTGTAACCTTTAGAGTCTTTAATGCATTGTTAGGTGAGTTACGTCACAATAA
ATGGCTGATTTGTCAACAGA

Product: fimbrial protein

Products: NA

Alternate protein names: Fimbrial Adhesin

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKGLSIKQALVFTLLLLGLCISRQASALSCREGSNAGSWVPIGSIYQRIDIGRPIILSAADFTAGNLIWRSQNFSTTFTC
WDNWNTGRGEHAYIYWNPKDAFGSLHRSLSVGVSINGIDYDAINMKQSGGRPSGPDLGEGTSNNGGGIARSRTVTVSYSV
YIKATGVTPPAGSFPALGLPSLFQIDGVGGLDARPNGNFNAYISGLDKIQVTHCNPQISVLANHGNSIDFGTLSATGARP
GVIARQIPFSIKATLRGGECGGQQLQASFSTLRADVGDRSLILPDTNPGVGIFLTKAGDTSTTPIPLQSNIDFGGRLQDK
QNEVSENFTANLKWLTNRPTAGRFHATANVDVTFK

Sequences:

>Translated_355_residues
MKGLSIKQALVFTLLLLGLCISRQASALSCREGSNAGSWVPIGSIYQRIDIGRPIILSAADFTAGNLIWRSQNFSTTFTC
WDNWNTGRGEHAYIYWNPKDAFGSLHRSLSVGVSINGIDYDAINMKQSGGRPSGPDLGEGTSNNGGGIARSRTVTVSYSV
YIKATGVTPPAGSFPALGLPSLFQIDGVGGLDARPNGNFNAYISGLDKIQVTHCNPQISVLANHGNSIDFGTLSATGARP
GVIARQIPFSIKATLRGGECGGQQLQASFSTLRADVGDRSLILPDTNPGVGIFLTKAGDTSTTPIPLQSNIDFGGRLQDK
QNEVSENFTANLKWLTNRPTAGRFHATANVDVTFK
>Mature_355_residues
MKGLSIKQALVFTLLLLGLCISRQASALSCREGSNAGSWVPIGSIYQRIDIGRPIILSAADFTAGNLIWRSQNFSTTFTC
WDNWNTGRGEHAYIYWNPKDAFGSLHRSLSVGVSINGIDYDAINMKQSGGRPSGPDLGEGTSNNGGGIARSRTVTVSYSV
YIKATGVTPPAGSFPALGLPSLFQIDGVGGLDARPNGNFNAYISGLDKIQVTHCNPQISVLANHGNSIDFGTLSATGARP
GVIARQIPFSIKATLRGGECGGQQLQASFSTLRADVGDRSLILPDTNPGVGIFLTKAGDTSTTPIPLQSNIDFGGRLQDK
QNEVSENFTANLKWLTNRPTAGRFHATANVDVTFK

Specific function: May Be Involved In A Fimbrial System Chaperoned By Ybgp And Exported By Ybgq. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37696; Mature: 37696

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLSIKQALVFTLLLLGLCISRQASALSCREGSNAGSWVPIGSIYQRIDIGRPIILSAA
CCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEC
DFTAGNLIWRSQNFSTTFTCWDNWNTGRGEHAYIYWNPKDAFGSLHRSLSVGVSINGIDY
CCCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHEEEECEEECCCCE
DAINMKQSGGRPSGPDLGEGTSNNGGGIARSRTVTVSYSVYIKATGVTPPAGSFPALGLP
EEEECHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCC
SLFQIDGVGGLDARPNGNFNAYISGLDKIQVTHCNPQISVLANHGNSIDFGTLSATGARP
CEEEECCCCCCCCCCCCCEEEEEECCEEEEEEECCCEEEEEEECCCCCCCCCEECCCCCC
GVIARQIPFSIKATLRGGECGGQQLQASFSTLRADVGDRSLILPDTNPGVGIFLTKAGDT
CEEEEECCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCCC
STTPIPLQSNIDFGGRLQDKQNEVSENFTANLKWLTNRPTAGRFHATANVDVTFK
CCCCEEECCCCCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCEEEEEEEEEEEEC
>Mature Secondary Structure
MKGLSIKQALVFTLLLLGLCISRQASALSCREGSNAGSWVPIGSIYQRIDIGRPIILSAA
CCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEC
DFTAGNLIWRSQNFSTTFTCWDNWNTGRGEHAYIYWNPKDAFGSLHRSLSVGVSINGIDY
CCCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHEEEECEEECCCCE
DAINMKQSGGRPSGPDLGEGTSNNGGGIARSRTVTVSYSVYIKATGVTPPAGSFPALGLP
EEEECHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCC
SLFQIDGVGGLDARPNGNFNAYISGLDKIQVTHCNPQISVLANHGNSIDFGTLSATGARP
CEEEECCCCCCCCCCCCCEEEEEECCEEEEEEECCCEEEEEEECCCCCCCCCEECCCCCC
GVIARQIPFSIKATLRGGECGGQQLQASFSTLRADVGDRSLILPDTNPGVGIFLTKAGDT
CEEEEECCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCCC
STTPIPLQSNIDFGGRLQDKQNEVSENFTANLKWLTNRPTAGRFHATANVDVTFK
CCCCEEECCCCCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA