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The map label for this gene is ssb [H]

Identifier: 238917874

GI number: 238917874

Start: 2019901

End: 2020365

Strand: Reverse

Name: ssb [H]

Synonym: EUBELI_01955

Alternate gene names: 238917874

Gene position: 2020365-2019901 (Counterclockwise)

Preceding gene: 238917875

Following gene: 238917873

Centisome position: 94.23

GC content: 41.72

Gene sequence:

>465_bases
ATGAACAAAGTTATTTTAATGGGAAGATTGACAAGAGAACCAGATGTAAGATATTCACAGAATGCAGAAGGTTCTATGGC
AGTTGCCAGATATACATTGGCTGTAGACAGAAGACGTGGAAGAAACAGTGATAATGAGCAGTCTGCTGATTTCATAAGCT
GTGTTGCTTTTGGAAGATCAGGAGAATTCGCTGAGAAGTATCTTCATCAGGGAACAAAGATTGTTGTTACTGGCAGAATC
CAGACAGGTAGTTATACTAACAAAGATGGTCAGAGAGTTTATACAACCGATGTAGTTGTTGAAGAACAGGAATTTGCAGA
AAGCAAATCCGCAGCAGCAGGTAATGGAGGAGACTCTAATTATGCTGCGTACACACCATCAAGACCAGAACCAAGCCAGG
CGGCTGGAGATGGATTTATGGCTATTCCTGACGGAGTAGATGATGAGGGTTTGCCTTTCAACTAA

Upstream 100 bases:

>100_bases
ATTAAGATTCTTAATCGTTAAAGACGGAGAGTAATTTATTAATCCCGATTTTTAAAGATGACGTTTGACTTGCAACTCTT
TATAGAAGAGGAGATAAAGT

Downstream 100 bases:

>100_bases
GATAGGAGGTAAAAACCATGCCAGATAAGAAGGCTGAGAGACCAGAGGGTCAGATGAGAAGAAGACCAATGCGTAGAAGA
AAGAAAGTTTGCGCATTTTG

Product: single-strand DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MNKVILMGRLTREPDVRYSQNAEGSMAVARYTLAVDRRRGRNSDNEQSADFISCVAFGRSGEFAEKYLHQGTKIVVTGRI
QTGSYTNKDGQRVYTTDVVVEEQEFAESKSAAAGNGGDSNYAAYTPSRPEPSQAAGDGFMAIPDGVDDEGLPFN

Sequences:

>Translated_154_residues
MNKVILMGRLTREPDVRYSQNAEGSMAVARYTLAVDRRRGRNSDNEQSADFISCVAFGRSGEFAEKYLHQGTKIVVTGRI
QTGSYTNKDGQRVYTTDVVVEEQEFAESKSAAAGNGGDSNYAAYTPSRPEPSQAAGDGFMAIPDGVDDEGLPFN
>Mature_154_residues
MNKVILMGRLTREPDVRYSQNAEGSMAVARYTLAVDRRRGRNSDNEQSADFISCVAFGRSGEFAEKYLHQGTKIVVTGRI
QTGSYTNKDGQRVYTTDVVVEEQEFAESKSAAAGNGGDSNYAAYTPSRPEPSQAAGDGFMAIPDGVDDEGLPFN

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=102, Percent_Identity=37.2549019607843, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 16728; Mature: 16728

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVILMGRLTREPDVRYSQNAEGSMAVARYTLAVDRRRGRNSDNEQSADFISCVAFGRS
CCEEEEEEECCCCCCCCCCCCCCCCEEEEHHEEEEHHHCCCCCCCCHHHHHEEEEEECCC
GEFAEKYLHQGTKIVVTGRIQTGSYTNKDGQRVYTTDVVVEEQEFAESKSAAAGNGGDSN
CHHHHHHHHCCCEEEEEEEEECCCCCCCCCCEEEEEEEEECHHHHHHHHCCCCCCCCCCC
YAAYTPSRPEPSQAAGDGFMAIPDGVDDEGLPFN
EEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MNKVILMGRLTREPDVRYSQNAEGSMAVARYTLAVDRRRGRNSDNEQSADFISCVAFGRS
CCEEEEEEECCCCCCCCCCCCCCCCEEEEHHEEEEHHHCCCCCCCCHHHHHEEEEEECCC
GEFAEKYLHQGTKIVVTGRIQTGSYTNKDGQRVYTTDVVVEEQEFAESKSAAAGNGGDSN
CHHHHHHHHCCCEEEEEEEEECCCCCCCCCCEEEEEEEEECHHHHHHHHCCCCCCCCCCC
YAAYTPSRPEPSQAAGDGFMAIPDGVDDEGLPFN
EEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842 [H]