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The map label for this gene is glgC

Identifier: 238917837

GI number: 238917837

Start: 1984967

End: 1986238

Strand: Reverse

Name: glgC

Synonym: EUBELI_01918

Alternate gene names: 238917837

Gene position: 1986238-1984967 (Counterclockwise)

Preceding gene: 238917842

Following gene: 238917836

Centisome position: 92.63

GC content: 37.89

Gene sequence:

>1272_bases
ATGATTAAAAAAGAAATGATTGCAATGCTGTTAGCTGGTGGCCAGGGAAGCAGATTAGGAGTACTTACTTCTAAAGTGGC
AAAGCCGGCAGTAGCATTTGGTGGAAAGTATAGAATAATCGACTTTCCTCTCAGTAACTGTATTAACTCAGGAATAGATA
CAGTGGGAGTATTAACACAGTATCAGCCACTTCGTCTTAATACGCATATAGGAATTGGTATTCCTTGGGATCTTGACCGT
AATGTAGGAGGAGTATCAGTTCTTCCACCTTATGAGAAGAGCCAGAACAGTGAATGGTATACAGGAACAGCTAATGCCAT
TTACCAGAATCTGGAGTATATGGAGCAGTATCATCCGGAATATGTACTTATTCTTTCAGGTGACCATATATACAAGATGG
ATTACAAGATAATGCTTGATTATCATAAGGCTAACAATGCGGATATTACAATTGCTGCGATGCCTGTACCTATGGAAGAA
GCAAGCAGATTTGGCGTGGTTGTTACAGATAACGATAATAAGATTACAGAGTTTGAAGAAAAGCCTGAACATCCAAAGAG
CAATCTTGCGTCAATGGGTATATACATATTCAGCTGGAAGGTTCTTAAGGATGCACTTATCAAGCTTAAGGATCAGCAGG
AATGCGATTTCGGAAAGCATGTAATTCCATACTGCTTTAATAATAATAAGAGAATATTTGCTTACGAATACAACGGATAC
TGGAAGGATGTAGGAACATTAAGCTCATACTGGGAAGCTAATATGGAACTTATAGATATTATTCCTATATTTAATCTTTA
TGAGGAATTCTGGAAGATATACACCAAGACAGATACAATCCCACCACAGTATATTGCTAAAGATGCCTATATAGAGAAGA
GTATCATAGGTGATGGAACTGAAGTATACGGAAGAGTATTTAATTCTGTAATAGGTTCGGGAGTTGTTATTGAAGAAGGC
TGTGTAATCCGAGACTCAATTATTATGAATAATTCACACATCGGAAAGAACACAACAATAACCAAGTCAATAATCGCAGA
AGATGTAACGATTGGAGAGAATGTTGAACTTGGAGTTGGTGAAGAAGCAGAGAATGTTAAGTTCCCTAAGATATATAATT
CCGGACTTGTTACCGTCGGTGAGTGGTCTGTTATTCCAGACAATGTTAAGGTTGGAAAGAATACAGCCATATCAGGAGAG
ACAACATTACAGGATTACCCTAATGGTGAGTTACCAGGCGGAGGCATAATAATTAAGGCAGGTGATAATTAA

Upstream 100 bases:

>100_bases
ATGTGTATAAAAAACTCGAAATTCTTTTTACTTAATGAGAATAGTATGATATAATCAAAATATCTAAAAGCAGTAAAAAT
TTAACATCAGAGGTGATAGC

Downstream 100 bases:

>100_bases
TGAAAGCAATAGGTATTATATTAGCTGGCGGAAATAACAGAATGATGCGTGAACTATCTAATAAGAGAGCCATTGCAGCC
ATGCCGATTGCCGGAAGTTA

Product: glucose-1-phosphate adenylyltransferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MIKKEMIAMLLAGGQGSRLGVLTSKVAKPAVAFGGKYRIIDFPLSNCINSGIDTVGVLTQYQPLRLNTHIGIGIPWDLDR
NVGGVSVLPPYEKSQNSEWYTGTANAIYQNLEYMEQYHPEYVLILSGDHIYKMDYKIMLDYHKANNADITIAAMPVPMEE
ASRFGVVVTDNDNKITEFEEKPEHPKSNLASMGIYIFSWKVLKDALIKLKDQQECDFGKHVIPYCFNNNKRIFAYEYNGY
WKDVGTLSSYWEANMELIDIIPIFNLYEEFWKIYTKTDTIPPQYIAKDAYIEKSIIGDGTEVYGRVFNSVIGSGVVIEEG
CVIRDSIIMNNSHIGKNTTITKSIIAEDVTIGENVELGVGEEAENVKFPKIYNSGLVTVGEWSVIPDNVKVGKNTAISGE
TTLQDYPNGELPGGGIIIKAGDN

Sequences:

>Translated_423_residues
MIKKEMIAMLLAGGQGSRLGVLTSKVAKPAVAFGGKYRIIDFPLSNCINSGIDTVGVLTQYQPLRLNTHIGIGIPWDLDR
NVGGVSVLPPYEKSQNSEWYTGTANAIYQNLEYMEQYHPEYVLILSGDHIYKMDYKIMLDYHKANNADITIAAMPVPMEE
ASRFGVVVTDNDNKITEFEEKPEHPKSNLASMGIYIFSWKVLKDALIKLKDQQECDFGKHVIPYCFNNNKRIFAYEYNGY
WKDVGTLSSYWEANMELIDIIPIFNLYEEFWKIYTKTDTIPPQYIAKDAYIEKSIIGDGTEVYGRVFNSVIGSGVVIEEG
CVIRDSIIMNNSHIGKNTTITKSIIAEDVTIGENVELGVGEEAENVKFPKIYNSGLVTVGEWSVIPDNVKVGKNTAISGE
TTLQDYPNGELPGGGIIIKAGDN
>Mature_423_residues
MIKKEMIAMLLAGGQGSRLGVLTSKVAKPAVAFGGKYRIIDFPLSNCINSGIDTVGVLTQYQPLRLNTHIGIGIPWDLDR
NVGGVSVLPPYEKSQNSEWYTGTANAIYQNLEYMEQYHPEYVLILSGDHIYKMDYKIMLDYHKANNADITIAAMPVPMEE
ASRFGVVVTDNDNKITEFEEKPEHPKSNLASMGIYIFSWKVLKDALIKLKDQQECDFGKHVIPYCFNNNKRIFAYEYNGY
WKDVGTLSSYWEANMELIDIIPIFNLYEEFWKIYTKTDTIPPQYIAKDAYIEKSIIGDGTEVYGRVFNSVIGSGVVIEEG
CVIRDSIIMNNSHIGKNTTITKSIIAEDVTIGENVELGVGEEAENVKFPKIYNSGLVTVGEWSVIPDNVKVGKNTAISGE
TTLQDYPNGELPGGGIIIKAGDN

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family

Homologues:

Organism=Homo sapiens, GI11761619, Length=415, Percent_Identity=24.8192771084337, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI11761621, Length=357, Percent_Identity=23.8095238095238, Blast_Score=83, Evalue=6e-16,
Organism=Escherichia coli, GI1789837, Length=389, Percent_Identity=39.3316195372751, Blast_Score=270, Evalue=2e-73,
Organism=Caenorhabditis elegans, GI133931050, Length=361, Percent_Identity=29.6398891966759, Blast_Score=102, Evalue=5e-22,
Organism=Saccharomyces cerevisiae, GI6320148, Length=358, Percent_Identity=25.1396648044693, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI21355443, Length=350, Percent_Identity=24.5714285714286, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24644084, Length=350, Percent_Identity=24.5714285714286, Blast_Score=85, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGC_EUBE2 (C4Z4L8)

Other databases:

- EMBL:   CP001104
- RefSeq:   YP_002931354.1
- ProteinModelPortal:   C4Z4L8
- GeneID:   7957659
- GenomeReviews:   CP001104_GR
- KEGG:   eel:EUBELI_01918
- OMA:   GTVDAYW
- ProtClustDB:   CLSK2548436
- HAMAP:   MF_00624
- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004
- TIGRFAMs:   TIGR02091

Pfam domain/function: PF00483 NTP_transferase; SSF51161 Trimer_LpxA_like

EC number: =2.7.7.27

Molecular weight: Translated: 47179; Mature: 47179

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS00808 ADP_GLC_PYROPHOSPH_1; PS00809 ADP_GLC_PYROPHOSPH_2; PS00810 ADP_GLC_PYROPHOSPH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKEMIAMLLAGGQGSRLGVLTSKVAKPAVAFGGKYRIIDFPLSNCINSGIDTVGVLTQ
CCHHHEEHHHHCCCCCCEEEHHHHHHHCCHHHCCCEEEEEECCHHHHHHCCCCCEEHHHC
YQPLRLNTHIGIGIPWDLDRNVGGVSVLPPYEKSQNSEWYTGTANAIYQNLEYMEQYHPE
CCCEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCC
YVLILSGDHIYKMDYKIMLDYHKANNADITIAAMPVPMEEASRFGVVVTDNDNKITEFEE
EEEEEECCEEEEEEEEEEEEEECCCCCEEEEEEECCCHHHHHHEEEEEECCCCCEECCCC
KPEHPKSNLASMGIYIFSWKVLKDALIKLKDQQECDFGKHVIPYCFNNNKRIFAYEYNGY
CCCCCCHHHHHCCEEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCE
WKDVGTLSSYWEANMELIDIIPIFNLYEEFWKIYTKTDTIPPQYIAKDAYIEKSIIGDGT
ECCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCH
EVYGRVFNSVIGSGVVIEEGCVIRDSIIMNNSHIGKNTTITKSIIAEDVTIGENVELGVG
HHHHHHHHHHHCCCEEEECCCEEEEEEEECCCCCCCCCEEHHHHHHHCCCCCCCEEECCC
EEAENVKFPKIYNSGLVTVGEWSVIPDNVKVGKNTAISGETTLQDYPNGELPGGGIIIKA
CCCCCCCCCEEECCCEEEECCCEECCCCEEECCCEEECCCCCCCCCCCCCCCCCEEEEEE
GDN
CCC
>Mature Secondary Structure
MIKKEMIAMLLAGGQGSRLGVLTSKVAKPAVAFGGKYRIIDFPLSNCINSGIDTVGVLTQ
CCHHHEEHHHHCCCCCCEEEHHHHHHHCCHHHCCCEEEEEECCHHHHHHCCCCCEEHHHC
YQPLRLNTHIGIGIPWDLDRNVGGVSVLPPYEKSQNSEWYTGTANAIYQNLEYMEQYHPE
CCCEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCC
YVLILSGDHIYKMDYKIMLDYHKANNADITIAAMPVPMEEASRFGVVVTDNDNKITEFEE
EEEEEECCEEEEEEEEEEEEEECCCCCEEEEEEECCCHHHHHHEEEEEECCCCCEECCCC
KPEHPKSNLASMGIYIFSWKVLKDALIKLKDQQECDFGKHVIPYCFNNNKRIFAYEYNGY
CCCCCCHHHHHCCEEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCE
WKDVGTLSSYWEANMELIDIIPIFNLYEEFWKIYTKTDTIPPQYIAKDAYIEKSIIGDGT
ECCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCH
EVYGRVFNSVIGSGVVIEEGCVIRDSIIMNNSHIGKNTTITKSIIAEDVTIGENVELGVG
HHHHHHHHHHHCCCEEEECCCEEEEEEEECCCCCCCCCEEHHHHHHHCCCCCCCEEECCC
EEAENVKFPKIYNSGLVTVGEWSVIPDNVKVGKNTAISGETTLQDYPNGELPGGGIIIKA
CCCCCCCCCEEECCCEEEECCCEECCCCEEECCCEEECCCCCCCCCCCCCCCCCEEEEEE
GDN
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA