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The map label for this gene is degP [H]

Identifier: 238917771

GI number: 238917771

Start: 1914345

End: 1915589

Strand: Reverse

Name: degP [H]

Synonym: EUBELI_01852

Alternate gene names: 238917771

Gene position: 1915589-1914345 (Counterclockwise)

Preceding gene: 238917775

Following gene: 238917770

Centisome position: 89.34

GC content: 38.63

Gene sequence:

>1245_bases
ATGGGAACTAATGAAGATGATAAGGAAAAGTATGACCTGTATACAGAACAGGTAGTTCTTCATCCGGCTAAGAAATACAA
GTGGCTTATAAGAATAGGCAAGCTGTTGCTTTTTGCTGTTTCTGTCGTAATAGCGGCAACTTTGTTTATGGTATTTTTAT
ATCCGGTATTGCAGAAAAGGATTGAAGAAAAGAATAAGGACAAGAATGTCATATATATCCAGAAGGATAATTACATACTT
GCAGAGAACCAGACGGCAGAATATTCAGATATATTGACAGAGAAGGACCTGAAAGATAATTATGAGGCTGCTATGGCAGC
TCTTCGCGCAAAAGTTGAGGATGTTAATAAATGTGTGGTTTCTGTTGACATTGAACAGCCATTTTCTGATGTTCCGACAA
TTGAAAGCAGTCAGACAGAGGTGGCAGGACTTGTGGTTGCCAATGTTAATTCAACATATCTTGTGCTTACAAGCTCAAGC
CTTTTAGAACCTGGAATGAATTATATAGTAAGGCTTTCTGATGAAGTCCAGACAGAAGCTGCATTTGTATGCAGAAACAC
GGCTTCAGGAATAGGGATTGTGAGTATTAATGCATCTAAGCTTACAGCTGAACAACGTAACAGTATCGCAGTTGCACAGC
TTGATAATTCTTATATGTTAAAGCAGGGGGATCTTGTTATTGCATCAGGAAAGCTTTATGAGACTTCGAAAGGTGTGTCA
TACGGAACAATTGCAGGTTCTAAGGTTGAGTATAGTAAAGACAGCGGTTATGAGGTTTTTGAGACAAGTGTAAGCATTAC
GGCGGGCGGTTTTGCAATATTGTTTAATTCTGAAGGAAATGTAGTTGGTGTATCTAAGGCTTCAACAGATACAAGTACGA
AATTCATTGGAATATCTGACCTTAAGGCACAGATTGAGACTATGATTAATGAGCATGGAATCATGTACTGTGGTATTACA
GGACAGAATGTAACAGAGGAGCTTGCAGCCAAATACGGACTTCCGAGTGGTGTATACATATCTAATGTGGATATTGATTC
ACCGGCTTATTATGCAGGATTGCAGGCAGGAGATGTAATTAGTGCAATTAATGGACAAAGTATTTTGACAATTCAGCAGT
TTAGTGAGAAACTATATCAGTGCGCTGATGGAGAAGCTATGTATGTGACAGCTATGAGGCAGGGAAAAGATGGCTATTCA
GATGTAGCATTTTCAGTAAGTGTACAGCTAAAACAACTTAATTAA

Upstream 100 bases:

>100_bases
TATAAATATTTACATGTAAGTCATAAATTGTTCATAATCGTAATATAAACTATGATATAATTGTATTCATAAGAGACGAA
AATTACATAAGGAGTCCGAA

Downstream 100 bases:

>100_bases
CGGAGGCAGAAGGATTTATGCGTTATATAGAGACTCTTAAAGATGGTGAGAGAATTTCAGAGGTATATCTGTGCAAATCA
AAATCAATAGCACTTACTAA

Product: 2-alkenal reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MGTNEDDKEKYDLYTEQVVLHPAKKYKWLIRIGKLLLFAVSVVIAATLFMVFLYPVLQKRIEEKNKDKNVIYIQKDNYIL
AENQTAEYSDILTEKDLKDNYEAAMAALRAKVEDVNKCVVSVDIEQPFSDVPTIESSQTEVAGLVVANVNSTYLVLTSSS
LLEPGMNYIVRLSDEVQTEAAFVCRNTASGIGIVSINASKLTAEQRNSIAVAQLDNSYMLKQGDLVIASGKLYETSKGVS
YGTIAGSKVEYSKDSGYEVFETSVSITAGGFAILFNSEGNVVGVSKASTDTSTKFIGISDLKAQIETMINEHGIMYCGIT
GQNVTEELAAKYGLPSGVYISNVDIDSPAYYAGLQAGDVISAINGQSILTIQQFSEKLYQCADGEAMYVTAMRQGKDGYS
DVAFSVSVQLKQLN

Sequences:

>Translated_414_residues
MGTNEDDKEKYDLYTEQVVLHPAKKYKWLIRIGKLLLFAVSVVIAATLFMVFLYPVLQKRIEEKNKDKNVIYIQKDNYIL
AENQTAEYSDILTEKDLKDNYEAAMAALRAKVEDVNKCVVSVDIEQPFSDVPTIESSQTEVAGLVVANVNSTYLVLTSSS
LLEPGMNYIVRLSDEVQTEAAFVCRNTASGIGIVSINASKLTAEQRNSIAVAQLDNSYMLKQGDLVIASGKLYETSKGVS
YGTIAGSKVEYSKDSGYEVFETSVSITAGGFAILFNSEGNVVGVSKASTDTSTKFIGISDLKAQIETMINEHGIMYCGIT
GQNVTEELAAKYGLPSGVYISNVDIDSPAYYAGLQAGDVISAINGQSILTIQQFSEKLYQCADGEAMYVTAMRQGKDGYS
DVAFSVSVQLKQLN
>Mature_413_residues
GTNEDDKEKYDLYTEQVVLHPAKKYKWLIRIGKLLLFAVSVVIAATLFMVFLYPVLQKRIEEKNKDKNVIYIQKDNYILA
ENQTAEYSDILTEKDLKDNYEAAMAALRAKVEDVNKCVVSVDIEQPFSDVPTIESSQTEVAGLVVANVNSTYLVLTSSSL
LEPGMNYIVRLSDEVQTEAAFVCRNTASGIGIVSINASKLTAEQRNSIAVAQLDNSYMLKQGDLVIASGKLYETSKGVSY
GTIAGSKVEYSKDSGYEVFETSVSITAGGFAILFNSEGNVVGVSKASTDTSTKFIGISDLKAQIETMINEHGIMYCGITG
QNVTEELAAKYGLPSGVYISNVDIDSPAYYAGLQAGDVISAINGQSILTIQQFSEKLYQCADGEAMYVTAMRQGKDGYSD
VAFSVSVQLKQLN

Specific function: Protease With A Shared Specificity With Degp. [C]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PDZ (DHR) domains [H]

Homologues:

Organism=Escherichia coli, GI1789629, Length=325, Percent_Identity=24.6153846153846, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR011782
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]

EC number: 3.4.21.-

Molecular weight: Translated: 45127; Mature: 44995

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTNEDDKEKYDLYTEQVVLHPAKKYKWLIRIGKLLLFAVSVVIAATLFMVFLYPVLQKR
CCCCCCCCHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEEKNKDKNVIYIQKDNYILAENQTAEYSDILTEKDLKDNYEAAMAALRAKVEDVNKCVV
HHHCCCCCCEEEEEECCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCEEEE
SVDIEQPFSDVPTIESSQTEVAGLVVANVNSTYLVLTSSSLLEPGMNYIVRLSDEVQTEA
EEECCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCHHHCCCCCEEEEECCHHHHHH
AFVCRNTASGIGIVSINASKLTAEQRNSIAVAQLDNSYMLKQGDLVIASGKLYETSKGVS
HEEEECCCCCEEEEEECHHHHHHHHCCCEEEEEECCCEEEEECCEEEECCCEEECCCCCE
YGTIAGSKVEYSKDSGYEVFETSVSITAGGFAILFNSEGNVVGVSKASTDTSTKFIGISD
EEEECCCEEEECCCCCCEEEEEEEEEEECCEEEEECCCCCEEEEECCCCCCCEEEEEHHH
LKAQIETMINEHGIMYCGITGQNVTEELAAKYGLPSGVYISNVDIDSPAYYAGLQAGDVI
HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHCCCCCCCCEE
SAINGQSILTIQQFSEKLYQCADGEAMYVTAMRQGKDGYSDVAFSVSVQLKQLN
ECCCCCEEEEHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEECC
>Mature Secondary Structure 
GTNEDDKEKYDLYTEQVVLHPAKKYKWLIRIGKLLLFAVSVVIAATLFMVFLYPVLQKR
CCCCCCCHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEEKNKDKNVIYIQKDNYILAENQTAEYSDILTEKDLKDNYEAAMAALRAKVEDVNKCVV
HHHCCCCCCEEEEEECCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCEEEE
SVDIEQPFSDVPTIESSQTEVAGLVVANVNSTYLVLTSSSLLEPGMNYIVRLSDEVQTEA
EEECCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCHHHCCCCCEEEEECCHHHHHH
AFVCRNTASGIGIVSINASKLTAEQRNSIAVAQLDNSYMLKQGDLVIASGKLYETSKGVS
HEEEECCCCCEEEEEECHHHHHHHHCCCEEEEEECCCEEEEECCEEEECCCEEECCCCCE
YGTIAGSKVEYSKDSGYEVFETSVSITAGGFAILFNSEGNVVGVSKASTDTSTKFIGISD
EEEECCCEEEECCCCCCEEEEEEEEEEECCEEEEECCCCCEEEEECCCCCCCEEEEEHHH
LKAQIETMINEHGIMYCGITGQNVTEELAAKYGLPSGVYISNVDIDSPAYYAGLQAGDVI
HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHCCCCCCCCEE
SAINGQSILTIQQFSEKLYQCADGEAMYVTAMRQGKDGYSDVAFSVSVQLKQLN
ECCCCCEEEEHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7861951 [H]