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The map label for this gene is xylP [H]

Identifier: 238917766

GI number: 238917766

Start: 1905987

End: 1907396

Strand: Reverse

Name: xylP [H]

Synonym: EUBELI_01847

Alternate gene names: 238917766

Gene position: 1907396-1905987 (Counterclockwise)

Preceding gene: 238917767

Following gene: 238917765

Centisome position: 88.96

GC content: 39.15

Gene sequence:

>1410_bases
ATGAGGAGTGATTCTATGGAAGAAAAAAAGTATTTAAAATGGTATAACAAAGTCGGATACGGATCCGGCGATATAGCAGG
AAATGTAGTATATGCATTTTTAACATCATTTGTGATGATTTATCTGACAGATTCTGTTGGACTCGCAGCAGGTATAGTGG
GTACGCTGATAGCACTTTCTAAGCTGTTTGATGGATTTACAGACATATTCTTTGGCTCGATGATAGATAAGACGCACAGT
AAGCTGGGCAAGGCAAAGCCATGGATGCTTTATGGTTACATTGGTTGTGCAATTACGCTGGTATGTTGTTTTGCTGTTCC
TACAAGCTGGGGAAATACAGCAAAATATGCATGGTTCTTTATTGCATACACATTGTTAAATGGAGTGTTCTATACAGCAA
ATAATATTGCATATTCCGCATTGACTTCTTTGATTACAAAGAACAGCAAAGAGCGTGTGCAGATGGGATCTTGTCGTTTT
ATTTTTGCATTTTCTACAAGTCTTTTGATTCAATCTGTAACCGTAAAATTTGTTGATTATTGTGGTGGGGATGCGGCAGC
ATGGAGAACTGTAGCAATTATCTATGCAATTATCGGTCTGATTGTAAATTCAATCTCAGCACTCTCCGTAAAAGAACTTC
CAGAGGAGGAGCTTAACGAGGGAGAAGTTAAGGGCGATGAAGAAAAGTATGGATTGGTTCATGCATTTAAGCTGCTTGTA
AAGAACAAGTATTATATGATGATCTGTGGAACTTATATTTTACAGCAGCTCTACAGTGCTATGATTGGTGCCGGTATCTA
CTATATGACATGGGTGCTGAAGAATAAAAACCTCTTTGGTCAGTTCGCCTGGGCTGTGAATATCCCACTTATTATAGCTC
TTATCTTTACTCCGACATTCGTTGGTAAATGGAAGGGTATGTACAAGTTGAATCTTAGGGGATATATCATTGCCGTTATT
GGTAGAGCGTTGGTTGTTGTAGCTGGATATATGGGAAGTGTTCCTCTTATGCTGGCATTTACAGCCCTTGCAGCCCTTGG
ACAGGGACCATGGCAGGGAGATATGAACGCAGTGATTGCATCTTGTTCAGAGTATACTTATCTGACACAGGGAAAGAGAA
TTGATGGAACTATGTATTCTTGTACATCACTTGGTGTAAAGATTGGTGGAGGAATTGGAACTGCAGTATGTGGCTGGTTA
TTAGAGCTTAGTGGTTATGTCGGAACAAATGCAACACAGCCGCAGTCAGCACTTGATATGATGCAGTTTATGTATTTATG
GTTGCCATTGATATTTGATGTGTTAATTATGATTGTTCTTTCCAGAATGAACGTAGAAGCTGCAAATGAAAAATTAAAAG
CTGAAAAGGGAATTAAGTCTGATGAAGTAACAGACGCAACAGAGTATTAG

Upstream 100 bases:

>100_bases
GACATATGGTGATACTTGGGATACAAAAGAACAAAAGTAAAACATTTAGAATAATATAGCATCAGACTGTTCGACACATG
AAATTCTAAACCTAATTAAG

Downstream 100 bases:

>100_bases
GGGTTATATGTAATGAAAAGCATTGTCTAATTGAACATTCGAGAATGGCAATGCTTTTTGTGCAAGAAGGAGGTGTATAT
TTTGAAGGCGGACACAATAA

Product: glycoside/pentoside/hexuronide:cation symporter

Products: NA

Alternate protein names: Xylose transporter [H]

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MRSDSMEEKKYLKWYNKVGYGSGDIAGNVVYAFLTSFVMIYLTDSVGLAAGIVGTLIALSKLFDGFTDIFFGSMIDKTHS
KLGKAKPWMLYGYIGCAITLVCCFAVPTSWGNTAKYAWFFIAYTLLNGVFYTANNIAYSALTSLITKNSKERVQMGSCRF
IFAFSTSLLIQSVTVKFVDYCGGDAAAWRTVAIIYAIIGLIVNSISALSVKELPEEELNEGEVKGDEEKYGLVHAFKLLV
KNKYYMMICGTYILQQLYSAMIGAGIYYMTWVLKNKNLFGQFAWAVNIPLIIALIFTPTFVGKWKGMYKLNLRGYIIAVI
GRALVVVAGYMGSVPLMLAFTALAALGQGPWQGDMNAVIASCSEYTYLTQGKRIDGTMYSCTSLGVKIGGGIGTAVCGWL
LELSGYVGTNATQPQSALDMMQFMYLWLPLIFDVLIMIVLSRMNVEAANEKLKAEKGIKSDEVTDATEY

Sequences:

>Translated_469_residues
MRSDSMEEKKYLKWYNKVGYGSGDIAGNVVYAFLTSFVMIYLTDSVGLAAGIVGTLIALSKLFDGFTDIFFGSMIDKTHS
KLGKAKPWMLYGYIGCAITLVCCFAVPTSWGNTAKYAWFFIAYTLLNGVFYTANNIAYSALTSLITKNSKERVQMGSCRF
IFAFSTSLLIQSVTVKFVDYCGGDAAAWRTVAIIYAIIGLIVNSISALSVKELPEEELNEGEVKGDEEKYGLVHAFKLLV
KNKYYMMICGTYILQQLYSAMIGAGIYYMTWVLKNKNLFGQFAWAVNIPLIIALIFTPTFVGKWKGMYKLNLRGYIIAVI
GRALVVVAGYMGSVPLMLAFTALAALGQGPWQGDMNAVIASCSEYTYLTQGKRIDGTMYSCTSLGVKIGGGIGTAVCGWL
LELSGYVGTNATQPQSALDMMQFMYLWLPLIFDVLIMIVLSRMNVEAANEKLKAEKGIKSDEVTDATEY
>Mature_469_residues
MRSDSMEEKKYLKWYNKVGYGSGDIAGNVVYAFLTSFVMIYLTDSVGLAAGIVGTLIALSKLFDGFTDIFFGSMIDKTHS
KLGKAKPWMLYGYIGCAITLVCCFAVPTSWGNTAKYAWFFIAYTLLNGVFYTANNIAYSALTSLITKNSKERVQMGSCRF
IFAFSTSLLIQSVTVKFVDYCGGDAAAWRTVAIIYAIIGLIVNSISALSVKELPEEELNEGEVKGDEEKYGLVHAFKLLV
KNKYYMMICGTYILQQLYSAMIGAGIYYMTWVLKNKNLFGQFAWAVNIPLIIALIFTPTFVGKWKGMYKLNLRGYIIAVI
GRALVVVAGYMGSVPLMLAFTALAALGQGPWQGDMNAVIASCSEYTYLTQGKRIDGTMYSCTSLGVKIGGGIGTAVCGWL
LELSGYVGTNATQPQSALDMMQFMYLWLPLIFDVLIMIVLSRMNVEAANEKLKAEKGIKSDEVTDATEY

Specific function: Responsible for transport of xylose into the cell, with the concomitant uptake of protons (symport system) [H]

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Escherichia coli, GI1786466, Length=463, Percent_Identity=26.133909287257, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1787902, Length=468, Percent_Identity=26.4957264957265, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI87082306, Length=487, Percent_Identity=23.8193018480493, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1790561, Length=443, Percent_Identity=25.9593679458239, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI145693206, Length=424, Percent_Identity=25.7075471698113, Blast_Score=108, Evalue=9e-25,
Organism=Escherichia coli, GI48994989, Length=437, Percent_Identity=23.7986270022883, Blast_Score=92, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 51628; Mature: 51628

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSDSMEEKKYLKWYNKVGYGSGDIAGNVVYAFLTSFVMIYLTDSVGLAAGIVGTLIALS
CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
KLFDGFTDIFFGSMIDKTHSKLGKAKPWMLYGYIGCAITLVCCFAVPTSWGNTAKYAWFF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IAYTLLNGVFYTANNIAYSALTSLITKNSKERVQMGSCRFIFAFSTSLLIQSVTVKFVDY
HHHHHHCCHHHHHCHHHHHHHHHHHHCCCHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHH
CGGDAAAWRTVAIIYAIIGLIVNSISALSVKELPEEELNEGEVKGDEEKYGLVHAFKLLV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHH
KNKYYMMICGTYILQQLYSAMIGAGIYYMTWVLKNKNLFGQFAWAVNIPLIIALIFTPTF
CCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
VGKWKGMYKLNLRGYIIAVIGRALVVVAGYMGSVPLMLAFTALAALGQGPWQGDMNAVIA
HHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHH
SCSEYTYLTQGKRIDGTMYSCTSLGVKIGGGIGTAVCGWLLELSGYVGTNATQPQSALDM
HHHHHHHHCCCCCCCCCHHHHHHCCEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
MQFMYLWLPLIFDVLIMIVLSRMNVEAANEKLKAEKGIKSDEVTDATEY
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9573180 [H]