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The map label for this gene is yedQ [C]

Identifier: 238917623

GI number: 238917623

Start: 1766579

End: 1768189

Strand: Reverse

Name: yedQ [C]

Synonym: EUBELI_01702

Alternate gene names: 238917623

Gene position: 1768189-1766579 (Counterclockwise)

Preceding gene: 238917624

Following gene: 238917622

Centisome position: 82.46

GC content: 34.14

Gene sequence:

>1611_bases
ATGAAAAGGATTAAGATAATTAACAGAATTATATATTGTGTTATTCTCCTGGCATTTCTTATTTTTATGGGATCGGCTTT
TATATTCAGTACGGTTGATATGAAAACACCAGCTGACAGTAAGACAAGGATATCTATAAAACCTGAGAATACCAGATATA
TCGGTGATGGTAAAATTGAATATCACATTAAGCTTGATGCAACGTCAGGGAATAATATGGCACTTGCATTTGTCAGCAGA
CATCAGAATGTTGAAGTATATGCAGGTGATAAACTTATATATTATGTAAGGAATCATAAGTCAATATACGGAACAACTAC
AGGAACGAATTATACAATAATCAATGTACCTTCATATACAACAGATGTTGTTGTCAGACTTACCAATGTTTATGATGGAT
ATAAGGCAAGGGAAACTTCATTTGAATATGGTGACGAAACAAGGATTATAAAGGAACTTATAGCAGAATCATTGCCGTCA
GTAATTTTGAGTTCTTTTATAATATTGGTTGGATTTGCAATGGTTATTCTGTGGATTATATGCAGAAAAAATATAGCACA
GACAGAAGCACTTTTTTATTTTGGATTATTTGCAATGATTATAGGTGCATGGGCACTTAATGAGACAGATCTTGCAACAC
TTCTTATTGAAGACCGTAAAATAGCTTCACTCATCGGTTATATGCTGCTTATGATAATGCCGGTACCATTTATACAGGCA
GAGAAGAATTTTTTTCAGGCAGAAAAGAAATCTGTGGTAAGTAATGTGTTATGTGCATTATTTACTGTAATAGATATAGT
ACTGCTTGTATGCCACATGACTGCTGTGAAGGAATTTAAAAATAGTGTATATATTATTCATATGATGCTTATTATATCAC
TGATATATTTCTGCGGCGTGCTGATTAAGAGAATACATGTCAATGGCTTTGACAGAAAAGTAAAAGCTAATATTATAGGT
GCGGCTGCACTTGGGATTTCTATGATTGTTGATCTTATTGCATATTATAAGGGAATGCAGCAGACAGATCTTATAGGAAA
ACTGGGTATTCTTGTATTTATTATTGTGCTTGGTTATGAGAGCATATCAGAAGCATTTGAGAAGATTAAAGAAGGACAGA
AGGCAGATTTCTACAAAGAGATGGCTGTAACTGATACTATGACAGGGGTTTATAATCGCTCTGCATTTCAGGAGTGGGAA
CATGAAACTTCTGATTATGAAGGATATTCTATAGCAACATTTGACCTTAATAATCTCAAGTGGTGTAATGATAATCTGGG
GCATGCAGCAGGAGATGCCTATATTCAGGCATCAGCCAGAATTATTAAAGAGATATTTGGCAGTCATGGCAAATGTTATC
GTATAGGCGGGGATGAATTCTGTACTGTAATTAATCAGAAGTCAAAAAAATTTGATAATGCAAGACATGTGAAGCAACTA
AGGGAACTTGAAAAGTATGCTGAAAAGGAACTTGGAATTAAAGGACTTAATGTACAGATTGCATGTGGTTATGCCGAATA
TGATATAAAGACAGATAAGAACTTTGAAGATACGAGAAGCAGAGCTGATAAGAAAATGTATGAGAGTAAGAGAAGATTGA
AAAGAGAGTGA

Upstream 100 bases:

>100_bases
AGTAAAGAAAAAATATTTGAAAATGAAGCCAATCTACTGTATTATGGAGTCGAAAGTATTACGGACAAATCTATAATACA
GTCGAAAGGCTTTTTTATTT

Downstream 100 bases:

>100_bases
TATATGGATAAATACGGAATATTAAAGCATTATTTTGGGTATGATTCATTTCGTCCAGGTCAGGAAAAGTTAGTTGATGC
TATTCTTGCTGGGCAGGATG

Product: two-component system PleD-like family response regulator

Products: NA

Alternate protein names: GGDEF Domain-Containing Protein; GGDEF Domain Protein; GGDEF Family Protein; Diguanylate Cyclase/Phosphodiesterase; Diguanylate Cyclase With PAS/PAC Sensor; Diguanylate Cyclase And Metal Dependent Phosphohydrolase; Signaling Protein; GAF/GGDEF-Domain-Containing Protein; Ggdef Family Protein; Diguanylate Cyclase Domain Protein; Response Regulator PleD; Membrane Associated GGDEF Protein; Response Regulator Receiver Modulated Diguanylate Cyclase; GGDEF/PAS Domain-Containing Protein; Sensory Box/Ggdef Family Protein; Sensory Box Histidine Kinase; Ggdef Domain Protein; 7TM Domain Sensor Diguanylate Cyclase; Inner Membrane Protein YcdT; Metal Dependent Phosphohydrolase; Signal Transduction Protein; Sensory Box/Response Regulator; Two Component Response Regulator Protein; Sensory Box/Ggdef Domain Protein; PAS/PAC Sensor Protein; Diguanylate Cyclase With GAF Sensor; GGDEF/Cache/HAMP Domain-Containing Protein; GGDEF/EAL Domain-Containing Protein

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MKRIKIINRIIYCVILLAFLIFMGSAFIFSTVDMKTPADSKTRISIKPENTRYIGDGKIEYHIKLDATSGNNMALAFVSR
HQNVEVYAGDKLIYYVRNHKSIYGTTTGTNYTIINVPSYTTDVVVRLTNVYDGYKARETSFEYGDETRIIKELIAESLPS
VILSSFIILVGFAMVILWIICRKNIAQTEALFYFGLFAMIIGAWALNETDLATLLIEDRKIASLIGYMLLMIMPVPFIQA
EKNFFQAEKKSVVSNVLCALFTVIDIVLLVCHMTAVKEFKNSVYIIHMMLIISLIYFCGVLIKRIHVNGFDRKVKANIIG
AAALGISMIVDLIAYYKGMQQTDLIGKLGILVFIIVLGYESISEAFEKIKEGQKADFYKEMAVTDTMTGVYNRSAFQEWE
HETSDYEGYSIATFDLNNLKWCNDNLGHAAGDAYIQASARIIKEIFGSHGKCYRIGGDEFCTVINQKSKKFDNARHVKQL
RELEKYAEKELGIKGLNVQIACGYAEYDIKTDKNFEDTRSRADKKMYESKRRLKRE

Sequences:

>Translated_536_residues
MKRIKIINRIIYCVILLAFLIFMGSAFIFSTVDMKTPADSKTRISIKPENTRYIGDGKIEYHIKLDATSGNNMALAFVSR
HQNVEVYAGDKLIYYVRNHKSIYGTTTGTNYTIINVPSYTTDVVVRLTNVYDGYKARETSFEYGDETRIIKELIAESLPS
VILSSFIILVGFAMVILWIICRKNIAQTEALFYFGLFAMIIGAWALNETDLATLLIEDRKIASLIGYMLLMIMPVPFIQA
EKNFFQAEKKSVVSNVLCALFTVIDIVLLVCHMTAVKEFKNSVYIIHMMLIISLIYFCGVLIKRIHVNGFDRKVKANIIG
AAALGISMIVDLIAYYKGMQQTDLIGKLGILVFIIVLGYESISEAFEKIKEGQKADFYKEMAVTDTMTGVYNRSAFQEWE
HETSDYEGYSIATFDLNNLKWCNDNLGHAAGDAYIQASARIIKEIFGSHGKCYRIGGDEFCTVINQKSKKFDNARHVKQL
RELEKYAEKELGIKGLNVQIACGYAEYDIKTDKNFEDTRSRADKKMYESKRRLKRE
>Mature_536_residues
MKRIKIINRIIYCVILLAFLIFMGSAFIFSTVDMKTPADSKTRISIKPENTRYIGDGKIEYHIKLDATSGNNMALAFVSR
HQNVEVYAGDKLIYYVRNHKSIYGTTTGTNYTIINVPSYTTDVVVRLTNVYDGYKARETSFEYGDETRIIKELIAESLPS
VILSSFIILVGFAMVILWIICRKNIAQTEALFYFGLFAMIIGAWALNETDLATLLIEDRKIASLIGYMLLMIMPVPFIQA
EKNFFQAEKKSVVSNVLCALFTVIDIVLLVCHMTAVKEFKNSVYIIHMMLIISLIYFCGVLIKRIHVNGFDRKVKANIIG
AAALGISMIVDLIAYYKGMQQTDLIGKLGILVFIIVLGYESISEAFEKIKEGQKADFYKEMAVTDTMTGVYNRSAFQEWE
HETSDYEGYSIATFDLNNLKWCNDNLGHAAGDAYIQASARIIKEIFGSHGKCYRIGGDEFCTVINQKSKKFDNARHVKQL
RELEKYAEKELGIKGLNVQIACGYAEYDIKTDKNFEDTRSRADKKMYESKRRLKRE

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082007, Length=158, Percent_Identity=30.379746835443, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60949; Mature: 60949

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIKIINRIIYCVILLAFLIFMGSAFIFSTVDMKTPADSKTRISIKPENTRYIGDGKIE
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCCEEEECCCCCEEEECCEEE
YHIKLDATSGNNMALAFVSRHQNVEVYAGDKLIYYVRNHKSIYGTTTGTNYTIINVPSYT
EEEEEECCCCCCEEEEEEECCCCEEEEECCEEEEEEECCCEEEEECCCCCEEEEECCCCH
TDVVVRLTNVYDGYKARETSFEYGDETRIIKELIAESLPSVILSSFIILVGFAMVILWII
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CRKNIAQTEALFYFGLFAMIIGAWALNETDLATLLIEDRKIASLIGYMLLMIMPVPFIQA
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHH
EKNFFQAEKKSVVSNVLCALFTVIDIVLLVCHMTAVKEFKNSVYIIHMMLIISLIYFCGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LIKRIHVNGFDRKVKANIIGAAALGISMIVDLIAYYKGMQQTDLIGKLGILVFIIVLGYE
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHH
SISEAFEKIKEGQKADFYKEMAVTDTMTGVYNRSAFQEWEHETSDYEGYSIATFDLNNLK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCE
WCNDNLGHAAGDAYIQASARIIKEIFGSHGKCYRIGGDEFCTVINQKSKKFDNARHVKQL
ECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHH
RELEKYAEKELGIKGLNVQIACGYAEYDIKTDKNFEDTRSRADKKMYESKRRLKRE
HHHHHHHHHHCCCCCCEEEEEECEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRIKIINRIIYCVILLAFLIFMGSAFIFSTVDMKTPADSKTRISIKPENTRYIGDGKIE
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCCEEEECCCCCEEEECCEEE
YHIKLDATSGNNMALAFVSRHQNVEVYAGDKLIYYVRNHKSIYGTTTGTNYTIINVPSYT
EEEEEECCCCCCEEEEEEECCCCEEEEECCEEEEEEECCCEEEEECCCCCEEEEECCCCH
TDVVVRLTNVYDGYKARETSFEYGDETRIIKELIAESLPSVILSSFIILVGFAMVILWII
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CRKNIAQTEALFYFGLFAMIIGAWALNETDLATLLIEDRKIASLIGYMLLMIMPVPFIQA
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHH
EKNFFQAEKKSVVSNVLCALFTVIDIVLLVCHMTAVKEFKNSVYIIHMMLIISLIYFCGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LIKRIHVNGFDRKVKANIIGAAALGISMIVDLIAYYKGMQQTDLIGKLGILVFIIVLGYE
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHH
SISEAFEKIKEGQKADFYKEMAVTDTMTGVYNRSAFQEWEHETSDYEGYSIATFDLNNLK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCE
WCNDNLGHAAGDAYIQASARIIKEIFGSHGKCYRIGGDEFCTVINQKSKKFDNARHVKQL
ECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHH
RELEKYAEKELGIKGLNVQIACGYAEYDIKTDKNFEDTRSRADKKMYESKRRLKRE
HHHHHHHHHHCCCCCCEEEEEECEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA