| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is yqhQ [H]
Identifier: 238917367
GI number: 238917367
Start: 1497888
End: 1499372
Strand: Reverse
Name: yqhQ [H]
Synonym: EUBELI_01444
Alternate gene names: 238917367
Gene position: 1499372-1497888 (Counterclockwise)
Preceding gene: 238917368
Following gene: 238917366
Centisome position: 69.93
GC content: 36.3
Gene sequence:
>1485_bases ATGTATACAAAACATTTTAGAAAGGTATGGTTATGTGATATGAAGCCATCAGGAATTGGGGGACAGGCTGTAATTGAAGG AATCATGATGCGCAATAAGGATAAATATTCTATTGCTGTCAGAAAACCTGATAATGAAATTGAGGTTGTCGTTAGAGAGA GCAGGCTTATAACAGAAAAGCATCCATGGCTTAATCTTCCGATAATAAGAGGAATTGTTAATTTTATTGATTCGCTGGTT ACGGGAATTTCAACAATTAATTATTCTGCATCATTTTATGATGATCCTGCAGAGCAGGAGAAAACCAAGCTTGATGAAGC AGGCAAGAATCTCCTTAAAGATAAATTTGAGTCAGTGCTTATGGCTGTGACAGTTATTCTTTCTATATTTTTTGCAATAG GCTTGTTTATGGTGCTTCCGTATCTTGCAACTAAGCTGGTATCGAAATACATAGTTTCCAAGACACTGCTTAATTTTATT GAAGGAATTGTAAGACTGCTTATATTTGTTATATATATTTCTCTTATATCAATGATGAAGGATATAAAGAGAACTTTTAT GTATCATGGTGCAGAGCACAAATGTATCAACTGTATAGAGAATGGTGCAAGACTTACACCTGAGAATGTCAGGAACAGTT CAAGATATCATAAAAGATGTGGAACAAGCTTTTTATTTTTTGTTATGTTTATAAGTATTATCTTTTTTATATTTATAAGG GTTGATAATACAGCATTACAGATTGTTATCAGAATCCTTCTTATTCCGGTCATTGCCGGAGTATCGTATGAGGTCATAAG ATGGGCTGGAAAGAATGATAACGCATTTGTAAGAGCATTAAGCAAGCCGGGAATGTGGTTCCAGAAGCTTACTACAAGAG AACCTGATACGGATATGATAGAAGTTGCTATCAGGGCTGTTGAGGAAGTATTTGACTGGAAGGAATTCCTTGCACAGTAT TATGCAGAAGCAGAGAATCCTGTTGAAGAACTTGTTGCTTCTGAGGCAGAACTGGCTATATCAGGAAGTCTTATTCATGG TAATGAACAGACAAGAACAATTGATGTAGAGGAACAGGAAGAAGAGAAACCTGTTAGTGAGATGACTGCTGAGGAAAGAT ATATCCAGGCTGGAAAAGAGTTTGGAATGGATGATACTGACAGAGAGACTTTCTCTTCTGTATATGAAGTAAGTGATGAG TCAGAAAGTACTATCTATGATAATTCATTTGATGATAGTGATTCAGAAGAAGATTCATATGGATATGGTGAAGATGGACA TGATGCTCCATCAGCTATAGAGGGATTTGAATTCATGGATACAGCTTCTTATGTTATAGATAACCAGTCTGAAGCTGAAG AAGGAGAAGAATTATCTGAAGAAGAAGTTGTTGCAGGATTTGAGTTTGAAGCTGGACAGGAACCGGAAGAGCAATATCCG GAAGATGTTCCTATGTTTAAACAGAAAAGGCTGGAAGATAAGTAG
Upstream 100 bases:
>100_bases AACTCGTGGAAGAATTGATAAGTTCAACAAGAAGTATGGTGTATCAAACAATTAATTTTGAATTAAGGTTGAGGTTTTTC GGGACCTCAACTTTTTTTGA
Downstream 100 bases:
>100_bases ATATGATGACAATTAGACAGGCCGTAAACTGGGGAACACAGATGCTGAAAGATAAAGGAATTGACAATGCAGAGCATGAC AGTTTTGAATTGTTATCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MYTKHFRKVWLCDMKPSGIGGQAVIEGIMMRNKDKYSIAVRKPDNEIEVVVRESRLITEKHPWLNLPIIRGIVNFIDSLV TGISTINYSASFYDDPAEQEKTKLDEAGKNLLKDKFESVLMAVTVILSIFFAIGLFMVLPYLATKLVSKYIVSKTLLNFI EGIVRLLIFVIYISLISMMKDIKRTFMYHGAEHKCINCIENGARLTPENVRNSSRYHKRCGTSFLFFVMFISIIFFIFIR VDNTALQIVIRILLIPVIAGVSYEVIRWAGKNDNAFVRALSKPGMWFQKLTTREPDTDMIEVAIRAVEEVFDWKEFLAQY YAEAENPVEELVASEAELAISGSLIHGNEQTRTIDVEEQEEEKPVSEMTAEERYIQAGKEFGMDDTDRETFSSVYEVSDE SESTIYDNSFDDSDSEEDSYGYGEDGHDAPSAIEGFEFMDTASYVIDNQSEAEEGEELSEEEVVAGFEFEAGQEPEEQYP EDVPMFKQKRLEDK
Sequences:
>Translated_494_residues MYTKHFRKVWLCDMKPSGIGGQAVIEGIMMRNKDKYSIAVRKPDNEIEVVVRESRLITEKHPWLNLPIIRGIVNFIDSLV TGISTINYSASFYDDPAEQEKTKLDEAGKNLLKDKFESVLMAVTVILSIFFAIGLFMVLPYLATKLVSKYIVSKTLLNFI EGIVRLLIFVIYISLISMMKDIKRTFMYHGAEHKCINCIENGARLTPENVRNSSRYHKRCGTSFLFFVMFISIIFFIFIR VDNTALQIVIRILLIPVIAGVSYEVIRWAGKNDNAFVRALSKPGMWFQKLTTREPDTDMIEVAIRAVEEVFDWKEFLAQY YAEAENPVEELVASEAELAISGSLIHGNEQTRTIDVEEQEEEKPVSEMTAEERYIQAGKEFGMDDTDRETFSSVYEVSDE SESTIYDNSFDDSDSEEDSYGYGEDGHDAPSAIEGFEFMDTASYVIDNQSEAEEGEELSEEEVVAGFEFEAGQEPEEQYP EDVPMFKQKRLEDK >Mature_494_residues MYTKHFRKVWLCDMKPSGIGGQAVIEGIMMRNKDKYSIAVRKPDNEIEVVVRESRLITEKHPWLNLPIIRGIVNFIDSLV TGISTINYSASFYDDPAEQEKTKLDEAGKNLLKDKFESVLMAVTVILSIFFAIGLFMVLPYLATKLVSKYIVSKTLLNFI EGIVRLLIFVIYISLISMMKDIKRTFMYHGAEHKCINCIENGARLTPENVRNSSRYHKRCGTSFLFFVMFISIIFFIFIR VDNTALQIVIRILLIPVIAGVSYEVIRWAGKNDNAFVRALSKPGMWFQKLTTREPDTDMIEVAIRAVEEVFDWKEFLAQY YAEAENPVEELVASEAELAISGSLIHGNEQTRTIDVEEQEEEKPVSEMTAEERYIQAGKEFGMDDTDRETFSSVYEVSDE SESTIYDNSFDDSDSEEDSYGYGEDGHDAPSAIEGFEFMDTASYVIDNQSEAEEGEELSEEEVVAGFEFEAGQEPEEQYP EDVPMFKQKRLEDK
Specific function: Unknown
COG id: COG3872
COG function: function code R; Predicted metal-dependent enzyme
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010787 - ProDom: PD131510 [H]
Pfam domain/function: PF07136 DUF1385 [H]
EC number: NA
Molecular weight: Translated: 56458; Mature: 56458
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTKHFRKVWLCDMKPSGIGGQAVIEGIMMRNKDKYSIAVRKPDNEIEVVVRESRLITEK CCCHHCCCEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEHHHHHHHCC HPWLNLPIIRGIVNFIDSLVTGISTINYSASFYDDPAEQEKTKLDEAGKNLLKDKFESVL CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MAVTVILSIFFAIGLFMVLPYLATKLVSKYIVSKTLLNFIEGIVRLLIFVIYISLISMMK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIKRTFMYHGAEHKCINCIENGARLTPENVRNSSRYHKRCGTSFLFFVMFISIIFFIFIR HHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDNTALQIVIRILLIPVIAGVSYEVIRWAGKNDNAFVRALSKPGMWFQKLTTREPDTDMI CCCHHHHHHHHHHHHHHHHCCCHHHHEECCCCCCHHHHHHCCCCHHHHHHHCCCCCHHHH EVAIRAVEEVFDWKEFLAQYYAEAENPVEELVASEAELAISGSLIHGNEQTRTIDVEEQE HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHEEECCEEECCCCCEEECCCCCH EEKPVSEMTAEERYIQAGKEFGMDDTDRETFSSVYEVSDESESTIYDNSFDDSDSEEDSY HCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC GYGEDGHDAPSAIEGFEFMDTASYVIDNQSEAEEGEELSEEEVVAGFEFEAGQEPEEQYP CCCCCCCCCCHHHHCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHCCCCCCCCCCHHHHCC EDVPMFKQKRLEDK CCCCHHHHHCCCCC >Mature Secondary Structure MYTKHFRKVWLCDMKPSGIGGQAVIEGIMMRNKDKYSIAVRKPDNEIEVVVRESRLITEK CCCHHCCCEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEHHHHHHHCC HPWLNLPIIRGIVNFIDSLVTGISTINYSASFYDDPAEQEKTKLDEAGKNLLKDKFESVL CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MAVTVILSIFFAIGLFMVLPYLATKLVSKYIVSKTLLNFIEGIVRLLIFVIYISLISMMK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIKRTFMYHGAEHKCINCIENGARLTPENVRNSSRYHKRCGTSFLFFVMFISIIFFIFIR HHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDNTALQIVIRILLIPVIAGVSYEVIRWAGKNDNAFVRALSKPGMWFQKLTTREPDTDMI CCCHHHHHHHHHHHHHHHHCCCHHHHEECCCCCCHHHHHHCCCCHHHHHHHCCCCCHHHH EVAIRAVEEVFDWKEFLAQYYAEAENPVEELVASEAELAISGSLIHGNEQTRTIDVEEQE HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHEEECCEEECCCCCEEECCCCCH EEKPVSEMTAEERYIQAGKEFGMDDTDRETFSSVYEVSDESESTIYDNSFDDSDSEEDSY HCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC GYGEDGHDAPSAIEGFEFMDTASYVIDNQSEAEEGEELSEEEVVAGFEFEAGQEPEEQYP CCCCCCCCCCHHHHCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHCCCCCCCCCCHHHHCC EDVPMFKQKRLEDK CCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]