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The map label for this gene is 238917359

Identifier: 238917359

GI number: 238917359

Start: 1490219

End: 1490845

Strand: Reverse

Name: 238917359

Synonym: EUBELI_01436

Alternate gene names: NA

Gene position: 1490845-1490219 (Counterclockwise)

Preceding gene: 238917360

Following gene: 238917358

Centisome position: 69.53

GC content: 39.39

Gene sequence:

>627_bases
ATGGCTAAGAAATATTATGCTGTGCGTGTAGGTAAAGTTCCCGGAATATATCAGACATGGGACGAATGTAAGAAGAATGT
ACATGGTTTTCCAGCTGCCGAATATAAGAGCTTCATGTCTATGGAAGAGGCGAAGGCTTATATGGGAAGGGAAGCTGTAC
AGGAGATTAATGGAAAGACCGGAAGTAGCAATATGGAAGATGTAATGCCTGACAATGATTATGCATTTGTTGATGGTTCT
TTTAATATTGTAACGGGAGTGTATGGATATGGCGGTTTTCTTATGCATGATGGTGTAAGATATGAATTGTCAGGTAATGG
CAGTGATAAAGAGATGGCTTCAATGCGTAATGTCGCAGGAGAGATTCTTGGAAGCATGTCTGCTGTAAAAAAAGCAATAG
AGCTTGGACTTAAAGATATTTCTATATTCTATGATTATGCAGGTATCAAGGCATGGGCTGTGGGAGAATGGAAACGAAAC
AAAAAAGGAACAATAGAATATTATAATTATATTACATCTGTCAGGGATTCAATTAATATCAGATTCGTGAAGGTCAGGGG
ACATTCAGGGGTTGAAGGAAATGAAGAGGCTGACAGGCTTGCAAAGAGAGCAGTAGGGTTGTGTTAG

Upstream 100 bases:

>100_bases
AAGAATTTTAATGATGCAATGACAGTATTTAACGGACTTTCAGTGGTAAAAGAGATTGCCGGAGTAATCCGAGTTTATTA
ATCAGAATAGGGAAATATAT

Downstream 100 bases:

>100_bases
GTATGAAGATTTCCAAGTGATGTTTTACAGTACAACATGCTTTCATGGATTTATTCGCCTAGTGGGAGTAAAAGCTGCCA
TATACAGAATATATTACAGT

Product: ribonuclease HI

Products: NA

Alternate protein names: Ribonuclease HI; Ribonuclease H-Related Protein; RNAse H Family Protein; Ribonuclease; Ribonuclease H1-Like; RNAse H

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MAKKYYAVRVGKVPGIYQTWDECKKNVHGFPAAEYKSFMSMEEAKAYMGREAVQEINGKTGSSNMEDVMPDNDYAFVDGS
FNIVTGVYGYGGFLMHDGVRYELSGNGSDKEMASMRNVAGEILGSMSAVKKAIELGLKDISIFYDYAGIKAWAVGEWKRN
KKGTIEYYNYITSVRDSINIRFVKVRGHSGVEGNEEADRLAKRAVGLC

Sequences:

>Translated_208_residues
MAKKYYAVRVGKVPGIYQTWDECKKNVHGFPAAEYKSFMSMEEAKAYMGREAVQEINGKTGSSNMEDVMPDNDYAFVDGS
FNIVTGVYGYGGFLMHDGVRYELSGNGSDKEMASMRNVAGEILGSMSAVKKAIELGLKDISIFYDYAGIKAWAVGEWKRN
KKGTIEYYNYITSVRDSINIRFVKVRGHSGVEGNEEADRLAKRAVGLC
>Mature_207_residues
AKKYYAVRVGKVPGIYQTWDECKKNVHGFPAAEYKSFMSMEEAKAYMGREAVQEINGKTGSSNMEDVMPDNDYAFVDGSF
NIVTGVYGYGGFLMHDGVRYELSGNGSDKEMASMRNVAGEILGSMSAVKKAIELGLKDISIFYDYAGIKAWAVGEWKRNK
KGTIEYYNYITSVRDSINIRFVKVRGHSGVEGNEEADRLAKRAVGLC

Specific function: Unknown

COG id: COG3341

COG function: function code R; Predicted double-stranded RNA/RNA-DNA hybrid binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23133; Mature: 23001

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: PS50879 RNASE_H

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKYYAVRVGKVPGIYQTWDECKKNVHGFPAAEYKSFMSMEEAKAYMGREAVQEINGKT
CCCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GSSNMEDVMPDNDYAFVDGSFNIVTGVYGYGGFLMHDGVRYELSGNGSDKEMASMRNVAG
CCCCCHHCCCCCCEEEECCCCEEEEEHHCCCCEEEECCEEEEECCCCCHHHHHHHHHHHH
EILGSMSAVKKAIELGLKDISIFYDYAGIKAWAVGEWKRNKKGTIEYYNYITSVRDSINI
HHHHHHHHHHHHHHHCHHHHHEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEE
RFVKVRGHSGVEGNEEADRLAKRAVGLC
EEEEEECCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKKYYAVRVGKVPGIYQTWDECKKNVHGFPAAEYKSFMSMEEAKAYMGREAVQEINGKT
CCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GSSNMEDVMPDNDYAFVDGSFNIVTGVYGYGGFLMHDGVRYELSGNGSDKEMASMRNVAG
CCCCCHHCCCCCCEEEECCCCEEEEEHHCCCCEEEECCEEEEECCCCCHHHHHHHHHHHH
EILGSMSAVKKAIELGLKDISIFYDYAGIKAWAVGEWKRNKKGTIEYYNYITSVRDSINI
HHHHHHHHHHHHHHHCHHHHHEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEE
RFVKVRGHSGVEGNEEADRLAKRAVGLC
EEEEEECCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA