| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is 238917294
Identifier: 238917294
GI number: 238917294
Start: 1409684
End: 1410748
Strand: Reverse
Name: 238917294
Synonym: EUBELI_01369
Alternate gene names: NA
Gene position: 1410748-1409684 (Counterclockwise)
Preceding gene: 238917295
Following gene: 238917293
Centisome position: 65.79
GC content: 42.44
Gene sequence:
>1065_bases ATGAGATATCCTGAATTCTTATCCGAAGGCGGAACTATAGGCTTCGTTGCACCATCTTTTGGTTGTGCGACGGAGCCTTA TAAAACAGCATTCGGAATGACAATTAAAAGATTTGAAAAAGAAGGTTATACAGTAGAACTTGGACCTAACTGTTATGAGG ACAAGGGAATTGGGATAAGCAACACACCGCAGGAATGCGGTAAGGAGCTTACACAGATGTATGAGAGCAATGTCAATGAT GTGCTTATATCATGTGGCGGTGGTGAACTGATGTGTGAGATTCTGCCATATGTTGATTTTGACAGGATTAAGGCGGCAAA GCCTAAGTGGTATCTTGGATATTCTGATAATACCAACTTCACATTTTTACAGAACACGATTGCTGATACGGCAAGTGTAT ACGGACCGTGTGCAGGCGCATTTGCAATGAAGGACTGGCATCAGGCGCTTGTGGATACTTTTGATGTGCTTCGTGGAAAA GGCTGCAAGAACAATAACGGAGTTGTGGAAAAACAGGTCCATGGATATGACACATGGGAGAGAGAGTCTCTAAAGAATGA GGAGAACCCTGCACCACAATACAATCTTACTGAGAAGAAGATTTTAAGAAAATATGTTGGTGGGGATGAATGTGATACGG AGATTGCATTTGAAGGAAGGCTTGTCGGCGGCTGCATGGACTGTCTTGTTAATCTTACAGGTACAAGTTTTGACAAGGTT AAAGAGTTTAACGAAAGATACGCAGATGACGGAATTATATGGTTCTTAGAGAGCTGTGATCTGAATGTATTTGCAATCAG AAGGGCTATGTGGCAGATGGATAATGCCGGGTGGTTTAAGAATGTGAAGGGATTTCTCATAGGAAGACCGCTGTGCTACG GACAGGAAATGATGGGGCTTGACCAGTATAGAGCAGTTACAGATATTGCGGCAAAGTATAATGTGCCGGTTATAATGGAC TGTGATTTCGGGCATCTTTCACCTTCAATGCCGATAGTAAGTGGGGCATATACACAGGTTAAGGTTAAGGATAACGACCT TTCACTTAATTACCGTTTCTGTTAA
Upstream 100 bases:
>100_bases TTAGCGTTATTATTAACAATAATGCTATTAATGTAGTAAAGAAATATATGTAGATTAATTATTCAGGCAGAATCTGAATG ATGAGGTAAGGAGGCAGTAT
Downstream 100 bases:
>100_bases TATTAACGATTGAAAAACACACTTTAATAGGGTAAAATGTTAAAATGACTATTAATAATACCTGTTATATCAGGGATAAG ATAAGGAGAAAACAATGGGT
Product: muramoyltetrapeptide carboxypeptidase
Products: NA
Alternate protein names: Peptidase U; Muramoyltetrapeptide Carboxypeptidase; Microcin Immunity Protein; LD-Carboxypeptidase; LD-Carboxypeptidase Family Protein; Microcin C7 Self-Immunity Protein MccF
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MRYPEFLSEGGTIGFVAPSFGCATEPYKTAFGMTIKRFEKEGYTVELGPNCYEDKGIGISNTPQECGKELTQMYESNVND VLISCGGGELMCEILPYVDFDRIKAAKPKWYLGYSDNTNFTFLQNTIADTASVYGPCAGAFAMKDWHQALVDTFDVLRGK GCKNNNGVVEKQVHGYDTWERESLKNEENPAPQYNLTEKKILRKYVGGDECDTEIAFEGRLVGGCMDCLVNLTGTSFDKV KEFNERYADDGIIWFLESCDLNVFAIRRAMWQMDNAGWFKNVKGFLIGRPLCYGQEMMGLDQYRAVTDIAAKYNVPVIMD CDFGHLSPSMPIVSGAYTQVKVKDNDLSLNYRFC
Sequences:
>Translated_354_residues MRYPEFLSEGGTIGFVAPSFGCATEPYKTAFGMTIKRFEKEGYTVELGPNCYEDKGIGISNTPQECGKELTQMYESNVND VLISCGGGELMCEILPYVDFDRIKAAKPKWYLGYSDNTNFTFLQNTIADTASVYGPCAGAFAMKDWHQALVDTFDVLRGK GCKNNNGVVEKQVHGYDTWERESLKNEENPAPQYNLTEKKILRKYVGGDECDTEIAFEGRLVGGCMDCLVNLTGTSFDKV KEFNERYADDGIIWFLESCDLNVFAIRRAMWQMDNAGWFKNVKGFLIGRPLCYGQEMMGLDQYRAVTDIAAKYNVPVIMD CDFGHLSPSMPIVSGAYTQVKVKDNDLSLNYRFC >Mature_354_residues MRYPEFLSEGGTIGFVAPSFGCATEPYKTAFGMTIKRFEKEGYTVELGPNCYEDKGIGISNTPQECGKELTQMYESNVND VLISCGGGELMCEILPYVDFDRIKAAKPKWYLGYSDNTNFTFLQNTIADTASVYGPCAGAFAMKDWHQALVDTFDVLRGK GCKNNNGVVEKQVHGYDTWERESLKNEENPAPQYNLTEKKILRKYVGGDECDTEIAFEGRLVGGCMDCLVNLTGTSFDKV KEFNERYADDGIIWFLESCDLNVFAIRRAMWQMDNAGWFKNVKGFLIGRPLCYGQEMMGLDQYRAVTDIAAKYNVPVIMD CDFGHLSPSMPIVSGAYTQVKVKDNDLSLNYRFC
Specific function: Unknown
COG id: COG1619
COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39797; Mature: 39797
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYPEFLSEGGTIGFVAPSFGCATEPYKTAFGMTIKRFEKEGYTVELGPNCYEDKGIGIS CCCHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC NTPQECGKELTQMYESNVNDVLISCGGGELMCEILPYVDFDRIKAAKPKWYLGYSDNTNF CCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCE TFLQNTIADTASVYGPCAGAFAMKDWHQALVDTFDVLRGKGCKNNNGVVEKQVHGYDTWE EEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHH RESLKNEENPAPQYNLTEKKILRKYVGGDECDTEIAFEGRLVGGCMDCLVNLTGTSFDKV HHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCEEHHHHHHHHHHCCCCCHHHH KEFNERYADDGIIWFLESCDLNVFAIRRAMWQMDNAGWFKNVKGFLIGRPLCYGQEMMGL HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHCCCHHEECCCCCCCHHHHCH DQYRAVTDIAAKYNVPVIMDCDFGHLSPSMPIVSGAYTQVKVKDNDLSLNYRFC HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCEEEEEEECCCEEEEEECC >Mature Secondary Structure MRYPEFLSEGGTIGFVAPSFGCATEPYKTAFGMTIKRFEKEGYTVELGPNCYEDKGIGIS CCCHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC NTPQECGKELTQMYESNVNDVLISCGGGELMCEILPYVDFDRIKAAKPKWYLGYSDNTNF CCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCE TFLQNTIADTASVYGPCAGAFAMKDWHQALVDTFDVLRGKGCKNNNGVVEKQVHGYDTWE EEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHH RESLKNEENPAPQYNLTEKKILRKYVGGDECDTEIAFEGRLVGGCMDCLVNLTGTSFDKV HHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCEEHHHHHHHHHHCCCCCHHHH KEFNERYADDGIIWFLESCDLNVFAIRRAMWQMDNAGWFKNVKGFLIGRPLCYGQEMMGL HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHCCCHHEECCCCCCCHHHHCH DQYRAVTDIAAKYNVPVIMDCDFGHLSPSMPIVSGAYTQVKVKDNDLSLNYRFC HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCEEEEEEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA