Click here to switch to the map view.

The map label for this gene is 238917278

Identifier: 238917278

GI number: 238917278

Start: 1390614

End: 1391126

Strand: Reverse

Name: 238917278

Synonym: EUBELI_01353

Alternate gene names: NA

Gene position: 1391126-1390614 (Counterclockwise)

Preceding gene: 238917279

Following gene: 238917275

Centisome position: 64.88

GC content: 38.99

Gene sequence:

>513_bases
ATGGACAGAATTGGAGAGTCTGGAAGACTCTGGCTTGAGAGAGAACCTTTATATGATGAGGTTATAGCTGAATTTGATAA
GTTCAATATGGATGAGTATGAAGAGGTTGTATTCTGTGGATTTGGGGAGCCAACAGAAAGATTTGATGTTCTTATCAAGG
TAGCTGAATATGTCAAAAAAACATTTGGCAAAAAGACAAGAATTAACACCAATGGGGTTGGCAATCTTGTGAATGGTAGG
GATATTGTGCCAGAGATGAAGGGGCTTATAGATACAATATCTATCAGTCTTAACAATCCACACAAAGATGAATACAATGC
ACTTGTAAGAAGTAAGTTCGGTGAGAAATCATTTGATGAGATGATAAGCTTCGCAAAGGAATGTACCAAGTATATCCCTA
ATGTTGTTCTTACAACAGTTGACACAACCATATCTCATGAGGAAGAGGCAGAGTGCCAGAAGCTATGTGATGAGATAGGG
GCTGCTTACAGGATTCGTCCTTGGGAGGATTAA

Upstream 100 bases:

>100_bases
GAGTTAAATCATGGAAATATTATATAAAGTTCATAACAATTTATATGTTAATCTAACTAATAAATGTCCATATGCATGTA
CTTTTTGTTTAAGACAGACA

Downstream 100 bases:

>100_bases
TGCATAGTTCTGTTGCACTGCTATTATGGGAAATCTAGCTGCCAATATTGTTGTAATTGAATAAAATCGCCGTGGTGTTA
AGAGGGGGCTTGCTGGTTAT

Product: Mg-dependent DNase

Products: NA

Alternate protein names: Radical SAM Domain Protein; Hydrolase TatD Family; TatD Family Hydrolase; Mg-Dependent DNAse; Metallo Cofactor Biosynthesis Protein; Radical SAM-Superfamily Protein; Deoxyribonuclease TatD Family; TatD Family Deoxyribonuclease; Radical SAM Superfamily Protein; Radical SAM Family Protein; Radical SAM; TatD-Related DeoxyribonucleaseRadical SAM Family Protein; Radical SAM Family Fe-S Protein

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MDRIGESGRLWLEREPLYDEVIAEFDKFNMDEYEEVVFCGFGEPTERFDVLIKVAEYVKKTFGKKTRINTNGVGNLVNGR
DIVPEMKGLIDTISISLNNPHKDEYNALVRSKFGEKSFDEMISFAKECTKYIPNVVLTTVDTTISHEEEAECQKLCDEIG
AAYRIRPWED

Sequences:

>Translated_170_residues
MDRIGESGRLWLEREPLYDEVIAEFDKFNMDEYEEVVFCGFGEPTERFDVLIKVAEYVKKTFGKKTRINTNGVGNLVNGR
DIVPEMKGLIDTISISLNNPHKDEYNALVRSKFGEKSFDEMISFAKECTKYIPNVVLTTVDTTISHEEEAECQKLCDEIG
AAYRIRPWED
>Mature_170_residues
MDRIGESGRLWLEREPLYDEVIAEFDKFNMDEYEEVVFCGFGEPTERFDVLIKVAEYVKKTFGKKTRINTNGVGNLVNGR
DIVPEMKGLIDTISISLNNPHKDEYNALVRSKFGEKSFDEMISFAKECTKYIPNVVLTTVDTTISHEEEAECQKLCDEIG
AAYRIRPWED

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.21.-

Molecular weight: Translated: 19574; Mature: 19574

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRIGESGRLWLEREPLYDEVIAEFDKFNMDEYEEVVFCGFGEPTERFDVLIKVAEYVKK
CCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCHHHEEEECCCCCHHHHHHHHHHHHHHHH
TFGKKTRINTNGVGNLVNGRDIVPEMKGLIDTISISLNNPHKDEYNALVRSKFGEKSFDE
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCHHH
MISFAKECTKYIPNVVLTTVDTTISHEEEAECQKLCDEIGAAYRIRPWED
HHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDRIGESGRLWLEREPLYDEVIAEFDKFNMDEYEEVVFCGFGEPTERFDVLIKVAEYVKK
CCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCHHHEEEECCCCCHHHHHHHHHHHHHHHH
TFGKKTRINTNGVGNLVNGRDIVPEMKGLIDTISISLNNPHKDEYNALVRSKFGEKSFDE
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCHHH
MISFAKECTKYIPNVVLTTVDTTISHEEEAECQKLCDEIGAAYRIRPWED
HHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA