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The map label for this gene is ynbA [H]

Identifier: 238917198

GI number: 238917198

Start: 1306709

End: 1307950

Strand: Reverse

Name: ynbA [H]

Synonym: EUBELI_01271

Alternate gene names: 238917198

Gene position: 1307950-1306709 (Counterclockwise)

Preceding gene: 238917199

Following gene: 238917197

Centisome position: 61.0

GC content: 40.5

Gene sequence:

>1242_bases
ATGGCAGTTTATGAGACAGATGAGATTATCGAGAGAGTTATTCTGGTTGGAGTAGCATTTGATACAGATGATGATACAGA
ACGCTCTCTTGATGAGCTTGGAGAGCTTGCTAAGACAGCAGGCGCGCAGACAGTTGGAAGAATGATTCAGACAAGAGATA
ACTTTCACCCTGCAACATATATTGGCAAAGGTAAGATTGAAGAATTAAGACTTATGATTGATGAGCTTGATGCTACGGGA
ATTATATGTGATGACGAATTAAGTCCTGCCCAGTTTAAGAATCTTGAGGATGAGCTTGGAATCAAGGTAATGGATAGAAC
AATGGTTATTCTTGACATATTTGCGGCAAGAGCTACATCAAGTGAAGGTAAGATTCAGGTTGAGATGGCACAGTTAAAGT
ACCGTTCAATAAGACTTGCGGGTTTCGGAACATCAATGTCAAGACTTGGTGGCGGAATAGGAACAAGAGGTCCCGGTGAG
AAAAAGATTGAGACAGACAGACGACTTATAAGGGACAGAATATCAAAGCTCTCAGCAGACCTTAAGGATATGAAGGAACA
CAGAGATGTCCAGAGAAGCAAAAGAGCTAAGACATCAACATCTGTTGCGGCTATAGTTGGATATACTAATGCCGGCAAAT
CAACACTTCTTAACAAGCTTACTGATGCGGGTGTGCTGTCGGAGGACAAGCTTTTTGCAACACTTGACCCTACAACAAGA
AGTATGGAACTTCCTAATGGAGAGAAAGTGTTGCTTACTGATACAGTCGGATTTATAAGAAAGCTTCCACATAATCTTAT
TGAAGCATTCAAGAGTACTCTTGAAGAGGCAAAGTATGCAGACATTATAGTGCATGTTGTTGATGTATCCAACCCAGACT
ATGAACAGCAGATGTCAACAGTATATGCAACACTTAAGCAGTTAGGTGTTGAAGGAAAGCCTGTTGTTACATTGTTTAAT
AAATGTGATGTTTTACCGGAGAAGCCGGCAGCTAAGGATTTGCATGCAGACTACACATACAATATATCTGCCGTAAGAGG
CAATGGCCTTGAAGCATTTAAAGAGTGCTTACAGGAAATTATTCTTAAGAGCAGAATAAGAATTGAAAGAGTATTTTCTT
ACAGCGAAGCAGGTAAGATACAGCTTATAAGACAGTTCGGACAGCTTGAAAGTGAAGAGTACACAGAAGACGGAATTAAG
GTGCTTGCCTATGTTCCTAAGGAGATAGAAGGGAAGTTGTAA

Upstream 100 bases:

>100_bases
TAACAGATAAGGTTATGTCAATGGTAACTGAGAAAGAAGTAACAGACTATCTTAGTGACTATATATCAGAAAGAAATAAA
AAGTAAAAGGAAATATATAT

Downstream 100 bases:

>100_bases
TTATGAATCTGATAGCAACAGTAGATAAGAACTGGTCAATAGGAAAACAGGGACATCTTCTTGTTAATATTCCGGAAGAT
ATTAAGCTTTTCCGAATGGA

Product: GTP-binding protein HflX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MAVYETDEIIERVILVGVAFDTDDDTERSLDELGELAKTAGAQTVGRMIQTRDNFHPATYIGKGKIEELRLMIDELDATG
IICDDELSPAQFKNLEDELGIKVMDRTMVILDIFAARATSSEGKIQVEMAQLKYRSIRLAGFGTSMSRLGGGIGTRGPGE
KKIETDRRLIRDRISKLSADLKDMKEHRDVQRSKRAKTSTSVAAIVGYTNAGKSTLLNKLTDAGVLSEDKLFATLDPTTR
SMELPNGEKVLLTDTVGFIRKLPHNLIEAFKSTLEEAKYADIIVHVVDVSNPDYEQQMSTVYATLKQLGVEGKPVVTLFN
KCDVLPEKPAAKDLHADYTYNISAVRGNGLEAFKECLQEIILKSRIRIERVFSYSEAGKIQLIRQFGQLESEEYTEDGIK
VLAYVPKEIEGKL

Sequences:

>Translated_413_residues
MAVYETDEIIERVILVGVAFDTDDDTERSLDELGELAKTAGAQTVGRMIQTRDNFHPATYIGKGKIEELRLMIDELDATG
IICDDELSPAQFKNLEDELGIKVMDRTMVILDIFAARATSSEGKIQVEMAQLKYRSIRLAGFGTSMSRLGGGIGTRGPGE
KKIETDRRLIRDRISKLSADLKDMKEHRDVQRSKRAKTSTSVAAIVGYTNAGKSTLLNKLTDAGVLSEDKLFATLDPTTR
SMELPNGEKVLLTDTVGFIRKLPHNLIEAFKSTLEEAKYADIIVHVVDVSNPDYEQQMSTVYATLKQLGVEGKPVVTLFN
KCDVLPEKPAAKDLHADYTYNISAVRGNGLEAFKECLQEIILKSRIRIERVFSYSEAGKIQLIRQFGQLESEEYTEDGIK
VLAYVPKEIEGKL
>Mature_412_residues
AVYETDEIIERVILVGVAFDTDDDTERSLDELGELAKTAGAQTVGRMIQTRDNFHPATYIGKGKIEELRLMIDELDATGI
ICDDELSPAQFKNLEDELGIKVMDRTMVILDIFAARATSSEGKIQVEMAQLKYRSIRLAGFGTSMSRLGGGIGTRGPGEK
KIETDRRLIRDRISKLSADLKDMKEHRDVQRSKRAKTSTSVAAIVGYTNAGKSTLLNKLTDAGVLSEDKLFATLDPTTRS
MELPNGEKVLLTDTVGFIRKLPHNLIEAFKSTLEEAKYADIIVHVVDVSNPDYEQQMSTVYATLKQLGVEGKPVVTLFNK
CDVLPEKPAAKDLHADYTYNISAVRGNGLEAFKECLQEIILKSRIRIERVFSYSEAGKIQLIRQFGQLESEEYTEDGIKV
LAYVPKEIEGKL

Specific function: Unknown

COG id: COG2262

COG function: function code R; GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI310124269, Length=213, Percent_Identity=38.0281690140845, Blast_Score=146, Evalue=4e-35,
Organism=Homo sapiens, GI310124267, Length=213, Percent_Identity=38.0281690140845, Blast_Score=146, Evalue=4e-35,
Organism=Homo sapiens, GI310124171, Length=213, Percent_Identity=38.0281690140845, Blast_Score=146, Evalue=4e-35,
Organism=Homo sapiens, GI310124169, Length=213, Percent_Identity=38.0281690140845, Blast_Score=146, Evalue=4e-35,
Organism=Homo sapiens, GI310133116, Length=227, Percent_Identity=37.0044052863436, Blast_Score=146, Evalue=4e-35,
Organism=Homo sapiens, GI310133118, Length=221, Percent_Identity=37.5565610859729, Blast_Score=144, Evalue=1e-34,
Organism=Escherichia coli, GI1790615, Length=352, Percent_Identity=39.4886363636364, Blast_Score=260, Evalue=1e-70,
Organism=Caenorhabditis elegans, GI17561038, Length=281, Percent_Identity=33.0960854092527, Blast_Score=148, Evalue=6e-36,
Organism=Drosophila melanogaster, GI24650079, Length=322, Percent_Identity=36.3354037267081, Blast_Score=161, Evalue=6e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016496
- InterPro:   IPR006073
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 45948; Mature: 45817

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVYETDEIIERVILVGVAFDTDDDTERSLDELGELAKTAGAQTVGRMIQTRDNFHPATY
CCCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
IGKGKIEELRLMIDELDATGIICDDELSPAQFKNLEDELGIKVMDRTMVILDIFAARATS
ECCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHCCHHHCCCEEHHHHHHHHHHHHHHCCC
SEGKIQVEMAQLKYRSIRLAGFGTSMSRLGGGIGTRGPGEKKIETDRRLIRDRISKLSAD
CCCEEEEEHHHHHHHEEEEEECCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LKDMKEHRDVQRSKRAKTSTSVAAIVGYTNAGKSTLLNKLTDAGVLSEDKLFATLDPTTR
HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCCCC
SMELPNGEKVLLTDTVGFIRKLPHNLIEAFKSTLEEAKYADIIVHVVDVSNPDYEQQMST
CEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHH
VYATLKQLGVEGKPVVTLFNKCDVLPEKPAAKDLHADYTYNISAVRGNGLEAFKECLQEI
HHHHHHHHCCCCCCEEEEEHHCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHH
ILKSRIRIERVFSYSEAGKIQLIRQFGQLESEEYTEDGIKVLAYVPKEIEGKL
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHEEEEECCHHHCCCC
>Mature Secondary Structure 
AVYETDEIIERVILVGVAFDTDDDTERSLDELGELAKTAGAQTVGRMIQTRDNFHPATY
CCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
IGKGKIEELRLMIDELDATGIICDDELSPAQFKNLEDELGIKVMDRTMVILDIFAARATS
ECCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHCCHHHCCCEEHHHHHHHHHHHHHHCCC
SEGKIQVEMAQLKYRSIRLAGFGTSMSRLGGGIGTRGPGEKKIETDRRLIRDRISKLSAD
CCCEEEEEHHHHHHHEEEEEECCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LKDMKEHRDVQRSKRAKTSTSVAAIVGYTNAGKSTLLNKLTDAGVLSEDKLFATLDPTTR
HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCCCC
SMELPNGEKVLLTDTVGFIRKLPHNLIEAFKSTLEEAKYADIIVHVVDVSNPDYEQQMST
CEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHH
VYATLKQLGVEGKPVVTLFNKCDVLPEKPAAKDLHADYTYNISAVRGNGLEAFKECLQEI
HHHHHHHHCCCCCCEEEEEHHCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHH
ILKSRIRIERVFSYSEAGKIQLIRQFGQLESEEYTEDGIKVLAYVPKEIEGKL
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHEEEEECCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]