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The map label for this gene is yhdE [C]

Identifier: 238917152

GI number: 238917152

Start: 1240283

End: 1240846

Strand: Reverse

Name: yhdE [C]

Synonym: EUBELI_01224

Alternate gene names: 238917152

Gene position: 1240846-1240283 (Counterclockwise)

Preceding gene: 238917153

Following gene: 238917151

Centisome position: 57.87

GC content: 38.48

Gene sequence:

>564_bases
ATGAAACGTTTGATACTTGCATCGGGTTCACCAAGACGAAGAGAATTAATGAGTCAGGTAGGACTTGATTTTACTGTTGT
TACAAGTGATGCAGATGAGAATATTAAAGAGATGGAGCCTGAAGATTATGTAAGAGAGTTATCTGCTATTAAGGCACAGT
CTGTATTAGAGCAATATGCTGATAAAGAGGATTCTGTAATCGTCATAGGTGCAGATACTATTGTTTACCATAAGGGAGAG
ATTCTTACCAAGCCGGAGGATGAAGAGGATGCATTCAGAATACTTAAGTCTTTAGAGGGTGAGATTCATCAGGTGTATAC
AGGAGTAACTATATGCAGTGCACACAAGAATGTAAGCTTTTACGAAAAAACTGATGTATGGGTATATGATATGACGGATG
AAGAAATCGGGGATTACATAAATACAGGAGAGCCTATGGACAAGGCTGGTGCATATGGTATTCAGGGGAAATTTGCAGCA
TACATTAAGGGTATTGAAGGCGACTATAATAATGTTGTCGGTCTGCCTGTAGCAAGACTTGTACATGAGCTTAAAGTATT
TTAA

Upstream 100 bases:

>100_bases
TATTGAAGCACGCTGTTTTTTTATGTTATAATGCAATATGTATGAGTCGAAATAGGCTCTGAACACAAAATACAGTGAAG
AACAAGGAGATGGAAGTTTT

Downstream 100 bases:

>100_bases
GGAGAAAATATATGGTTAAATTCGTAGCAAGTGACCTTGATGGGACATTGCTTCTAAATGGAGCGCAGAGTGTTGATGAA
TCTGCGGTACAGTATATTAA

Product: septum formation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKRLILASGSPRRRELMSQVGLDFTVVTSDADENIKEMEPEDYVRELSAIKAQSVLEQYADKEDSVIVIGADTIVYHKGE
ILTKPEDEEDAFRILKSLEGEIHQVYTGVTICSAHKNVSFYEKTDVWVYDMTDEEIGDYINTGEPMDKAGAYGIQGKFAA
YIKGIEGDYNNVVGLPVARLVHELKVF

Sequences:

>Translated_187_residues
MKRLILASGSPRRRELMSQVGLDFTVVTSDADENIKEMEPEDYVRELSAIKAQSVLEQYADKEDSVIVIGADTIVYHKGE
ILTKPEDEEDAFRILKSLEGEIHQVYTGVTICSAHKNVSFYEKTDVWVYDMTDEEIGDYINTGEPMDKAGAYGIQGKFAA
YIKGIEGDYNNVVGLPVARLVHELKVF
>Mature_187_residues
MKRLILASGSPRRRELMSQVGLDFTVVTSDADENIKEMEPEDYVRELSAIKAQSVLEQYADKEDSVIVIGADTIVYHKGE
ILTKPEDEEDAFRILKSLEGEIHQVYTGVTICSAHKNVSFYEKTDVWVYDMTDEEIGDYINTGEPMDKAGAYGIQGKFAA
YIKGIEGDYNNVVGLPVARLVHELKVF

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

Organism=Homo sapiens, GI117553627, Length=196, Percent_Identity=40.8163265306122, Blast_Score=139, Evalue=2e-33,
Organism=Homo sapiens, GI291045183, Length=194, Percent_Identity=37.1134020618557, Blast_Score=120, Evalue=9e-28,
Organism=Homo sapiens, GI310133124, Length=126, Percent_Identity=43.6507936507937, Blast_Score=107, Evalue=5e-24,
Organism=Homo sapiens, GI291045181, Length=126, Percent_Identity=43.6507936507937, Blast_Score=107, Evalue=6e-24,
Organism=Escherichia coli, GI1789646, Length=178, Percent_Identity=42.1348314606742, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI87081830, Length=189, Percent_Identity=33.3333333333333, Blast_Score=93, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI193202443, Length=183, Percent_Identity=38.7978142076503, Blast_Score=120, Evalue=5e-28,
Organism=Saccharomyces cerevisiae, GI6324685, Length=205, Percent_Identity=33.1707317073171, Blast_Score=80, Evalue=3e-16,
Organism=Drosophila melanogaster, GI78706856, Length=191, Percent_Identity=41.8848167539267, Blast_Score=140, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 20988; Mature: 20988

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLILASGSPRRRELMSQVGLDFTVVTSDADENIKEMEPEDYVRELSAIKAQSVLEQYA
CCEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHC
DKEDSVIVIGADTIVYHKGEILTKPEDEEDAFRILKSLEGEIHQVYTGVTICSAHKNVSF
CCCCCEEEEECCEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCE
YEKTDVWVYDMTDEEIGDYINTGEPMDKAGAYGIQGKFAAYIKGIEGDYNNVVGLPVARL
EECCCEEEEECCHHHHHHHHCCCCCCHHCCCCCCCCHHHEEEECCCCCCCCCCCCHHHHH
VHELKVF
HHHHHCC
>Mature Secondary Structure
MKRLILASGSPRRRELMSQVGLDFTVVTSDADENIKEMEPEDYVRELSAIKAQSVLEQYA
CCEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHC
DKEDSVIVIGADTIVYHKGEILTKPEDEEDAFRILKSLEGEIHQVYTGVTICSAHKNVSF
CCCCCEEEEECCEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCE
YEKTDVWVYDMTDEEIGDYINTGEPMDKAGAYGIQGKFAAYIKGIEGDYNNVVGLPVARL
EECCCEEEEECCHHHHHHHHCCCCCCHHCCCCCCCCHHHEEEECCCCCCCCCCCCHHHHH
VHELKVF
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA