| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is gpmI [H]
Identifier: 238917116
GI number: 238917116
Start: 1198604
End: 1200154
Strand: Reverse
Name: gpmI [H]
Synonym: EUBELI_01187
Alternate gene names: 238917116
Gene position: 1200154-1198604 (Counterclockwise)
Preceding gene: 238917117
Following gene: 238917115
Centisome position: 55.97
GC content: 39.39
Gene sequence:
>1551_bases ATGAGTAAAAAACCAGTAGTTTTAATGGTACTTGATGGTTATGGTTTAAATGATAGAACAGAGGGTAATGCTATTGCTAT GGCTAACACTCCTGTTATGGATAAGCTTATGAAGGAATGCCCGTTCCAGAAGGGATATGCTTCAGGACTTGCTGTAGGTC TTCCAGACGGACAGATGGGTAATTCAGAAGTTGGTCATATGAATATTGGTGCTGGTAGAATTATTTATCAGGATCTTACA AGAATTACTAAGGATATTGAAGATGGTACATTCTTTAAGAACGAAGAATTACTTGAGGCAATGGAGAACTGCAAGAAGAA TGATTCGGATCTTCACCTTTTCGGACTTTTATCAGATGGTGGTGTTCACAGTCATTTAAGCCATGTATATGGACTTTTAG AGATGGCAAAGCAGCAGGGAGTGTCTAAAGTATATGTTCATGCGTTCCTTGACGGAAGAGATACACCTCCAGCTTCAGCT AAGGGATTTGTTGAGACACTTGAGAATAAGATGGCAGAAATCGGAGTTGGTAAGGTCGCATCTTTATCAGGTCGTTACTA TGCAATGGACAGAGATAATAACTGGGACAGAGTAGAAAAGGCTTATGATTCACTTGTAACAGGTGATGGCATTAAGGCCG AGTCAGCTACACAGGCACTTCAGGAGTCATATGATAATGGTAAGACAGATGAATTCGTTGAGCCAACAGTTATCTGTAAA GATGGTCAGCCACTTTCATTAGTTAAGGCTAATGATTCTGTTATATTCTTTAACTTCCGTCCAGACCGTGCAAGAGAGAT GACAAGAGCGTTCTGCGATGATAAGTTTACAGGATTTGAAAGAAAGACAGGATTTATTCCATTAACATTTGTATGTTTCA AGGATTATGATGAATCAATCCCTAACAAGAAGGTTGCATTCAAGAAAGAGATTATTAAGAACACATTTGGTGAATTCCTT GCTAATCATGGAAAGAAGCAGTTAAGACTTGCTGAGACAGAGAAATATGCACATGTTACATTCTTCTTTAATGGCGGTGT TGAAGACCCTAATGTTGATGAGTTCAGATTACTCGTTAACTCACCTAAGGATGTTGCAACATATGACTTAAAGCCAGAGA TGAGTGCTCCGGAAGTAGGTATGGACTTAGTTGAGGCTATAAAGTCTGACAAATATGATGTTATTATTATCAACTTCGCT AATCCTGATATGGTTGGGCATACAGGTGTTATCCCAGCAGCAATCAAGGCTGTAGAGAAGGTTGATGAGCTTGTTGGCAA GGCTGTAGATGCAGTAAAGGATGTTGACGGAGTTCTCTTCATCTGTGCAGACCACGGTAATGCTGAGAAGATGATTGATT ACGAAACAGGAGCTCCACATACAGCACATACAACTAACCCTGTTCCATTTATTCTTGTTAATTATGATGAGAATTATACA CTTCGTGAGGGTGGAAGATTATGTGATATCGCTCCTACACTTATAGAAATTATGGGACTTGAGAAACCAGTTGAGATGAC AGGTGAGTCTCTTCTTGTGAAGAAGAACTAA
Upstream 100 bases:
>100_bases TTTGATGATAATATTCAAGACAAGGTCTTTGATTTTTTTTACAAATGTGCTATCATGCTATAGGCAATTAATTAGAATAC ATTTAAAGGAGAATCACATT
Downstream 100 bases:
>100_bases TTGAATGGTTGAAATTAATTTATTGATTTTTCTTGCACAAAATGTTTATTTGTGATAGAATGACCTATGTTGCCGTATTG GCATAATTATGTAATAAAAA
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MSKKPVVLMVLDGYGLNDRTEGNAIAMANTPVMDKLMKECPFQKGYASGLAVGLPDGQMGNSEVGHMNIGAGRIIYQDLT RITKDIEDGTFFKNEELLEAMENCKKNDSDLHLFGLLSDGGVHSHLSHVYGLLEMAKQQGVSKVYVHAFLDGRDTPPASA KGFVETLENKMAEIGVGKVASLSGRYYAMDRDNNWDRVEKAYDSLVTGDGIKAESATQALQESYDNGKTDEFVEPTVICK DGQPLSLVKANDSVIFFNFRPDRAREMTRAFCDDKFTGFERKTGFIPLTFVCFKDYDESIPNKKVAFKKEIIKNTFGEFL ANHGKKQLRLAETEKYAHVTFFFNGGVEDPNVDEFRLLVNSPKDVATYDLKPEMSAPEVGMDLVEAIKSDKYDVIIINFA NPDMVGHTGVIPAAIKAVEKVDELVGKAVDAVKDVDGVLFICADHGNAEKMIDYETGAPHTAHTTNPVPFILVNYDENYT LREGGRLCDIAPTLIEIMGLEKPVEMTGESLLVKKN
Sequences:
>Translated_516_residues MSKKPVVLMVLDGYGLNDRTEGNAIAMANTPVMDKLMKECPFQKGYASGLAVGLPDGQMGNSEVGHMNIGAGRIIYQDLT RITKDIEDGTFFKNEELLEAMENCKKNDSDLHLFGLLSDGGVHSHLSHVYGLLEMAKQQGVSKVYVHAFLDGRDTPPASA KGFVETLENKMAEIGVGKVASLSGRYYAMDRDNNWDRVEKAYDSLVTGDGIKAESATQALQESYDNGKTDEFVEPTVICK DGQPLSLVKANDSVIFFNFRPDRAREMTRAFCDDKFTGFERKTGFIPLTFVCFKDYDESIPNKKVAFKKEIIKNTFGEFL ANHGKKQLRLAETEKYAHVTFFFNGGVEDPNVDEFRLLVNSPKDVATYDLKPEMSAPEVGMDLVEAIKSDKYDVIIINFA NPDMVGHTGVIPAAIKAVEKVDELVGKAVDAVKDVDGVLFICADHGNAEKMIDYETGAPHTAHTTNPVPFILVNYDENYT LREGGRLCDIAPTLIEIMGLEKPVEMTGESLLVKKN >Mature_515_residues SKKPVVLMVLDGYGLNDRTEGNAIAMANTPVMDKLMKECPFQKGYASGLAVGLPDGQMGNSEVGHMNIGAGRIIYQDLTR ITKDIEDGTFFKNEELLEAMENCKKNDSDLHLFGLLSDGGVHSHLSHVYGLLEMAKQQGVSKVYVHAFLDGRDTPPASAK GFVETLENKMAEIGVGKVASLSGRYYAMDRDNNWDRVEKAYDSLVTGDGIKAESATQALQESYDNGKTDEFVEPTVICKD GQPLSLVKANDSVIFFNFRPDRAREMTRAFCDDKFTGFERKTGFIPLTFVCFKDYDESIPNKKVAFKKEIIKNTFGEFLA NHGKKQLRLAETEKYAHVTFFFNGGVEDPNVDEFRLLVNSPKDVATYDLKPEMSAPEVGMDLVEAIKSDKYDVIIINFAN PDMVGHTGVIPAAIKAVEKVDELVGKAVDAVKDVDGVLFICADHGNAEKMIDYETGAPHTAHTTNPVPFILVNYDENYTL REGGRLCDIAPTLIEIMGLEKPVEMTGESLLVKKN
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=514, Percent_Identity=54.6692607003891, Blast_Score=547, Evalue=1e-157, Organism=Caenorhabditis elegans, GI17507741, Length=515, Percent_Identity=44.6601941747573, Blast_Score=411, Evalue=1e-115, Organism=Caenorhabditis elegans, GI32564249, Length=515, Percent_Identity=44.6601941747573, Blast_Score=411, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 57008; Mature: 56877
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKPVVLMVLDGYGLNDRTEGNAIAMANTPVMDKLMKECPFQKGYASGLAVGLPDGQMG CCCCCEEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCEEEECCCCCCC NSEVGHMNIGAGRIIYQDLTRITKDIEDGTFFKNEELLEAMENCKKNDSDLHLFGLLSDG CCCCCEEECCCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHCCCCCCEEEEEEECCC GVHSHLSHVYGLLEMAKQQGVSKVYVHAFLDGRDTPPASAKGFVETLENKMAEIGVGKVA CHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEE SLSGRYYAMDRDNNWDRVEKAYDSLVTGDGIKAESATQALQESYDNGKTDEFVEPTVICK ECCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEC DGQPLSLVKANDSVIFFNFRPDRAREMTRAFCDDKFTGFERKTGFIPLTFVCFKDYDESI CCCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECHHHCC PNKKVAFKKEIIKNTFGEFLANHGKKQLRLAETEKYAHVTFFFNGGVEDPNVDEFRLLVN CCCHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCEEEEEEEEECCCCCCCCCCEEEEEC SPKDVATYDLKPEMSAPEVGMDLVEAIKSDKYDVIIINFANPDMVGHTGVIPAAIKAVEK CCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHH VDELVGKAVDAVKDVDGVLFICADHGNAEKMIDYETGAPHTAHTTNPVPFILVNYDENYT HHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCEE LREGGRLCDIAPTLIEIMGLEKPVEMTGESLLVKKN ECCCCCEEEHHHHHHHHHCCCCCHHHCCCEEEEECC >Mature Secondary Structure SKKPVVLMVLDGYGLNDRTEGNAIAMANTPVMDKLMKECPFQKGYASGLAVGLPDGQMG CCCCEEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCEEEECCCCCCC NSEVGHMNIGAGRIIYQDLTRITKDIEDGTFFKNEELLEAMENCKKNDSDLHLFGLLSDG CCCCCEEECCCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHCCCCCCEEEEEEECCC GVHSHLSHVYGLLEMAKQQGVSKVYVHAFLDGRDTPPASAKGFVETLENKMAEIGVGKVA CHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEE SLSGRYYAMDRDNNWDRVEKAYDSLVTGDGIKAESATQALQESYDNGKTDEFVEPTVICK ECCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEC DGQPLSLVKANDSVIFFNFRPDRAREMTRAFCDDKFTGFERKTGFIPLTFVCFKDYDESI CCCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECHHHCC PNKKVAFKKEIIKNTFGEFLANHGKKQLRLAETEKYAHVTFFFNGGVEDPNVDEFRLLVN CCCHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCEEEEEEEEECCCCCCCCCCEEEEEC SPKDVATYDLKPEMSAPEVGMDLVEAIKSDKYDVIIINFANPDMVGHTGVIPAAIKAVEK CCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHH VDELVGKAVDAVKDVDGVLFICADHGNAEKMIDYETGAPHTAHTTNPVPFILVNYDENYT HHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCEE LREGGRLCDIAPTLIEIMGLEKPVEMTGESLLVKKN ECCCCCEEEHHHHHHHHHCCCCCHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA