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The map label for this gene is scpA [H]

Identifier: 238917096

GI number: 238917096

Start: 1178065

End: 1178868

Strand: Reverse

Name: scpA [H]

Synonym: EUBELI_01166

Alternate gene names: 238917096

Gene position: 1178868-1178065 (Counterclockwise)

Preceding gene: 238917098

Following gene: 238917095

Centisome position: 54.98

GC content: 37.81

Gene sequence:

>804_bases
ATGCACAGTAAATATAGCGAGGCAGATATGGGAATAAGTGTTAAGCTTCAGGTGTTTGAAGGACCTTTAGATCTTCTTTT
ACATTTGATAGATAAGAATAAAGTTAATATATATGATATTCCGATTGCAATGATTACAGAACAGTATATGGAATATGTTG
AGCAGCTAAAGAAGGAAGATCTTAATGTGGTAAGTGAGTTCCTTGTAATGGCGGCAACTCTTCTTGATATTAAGTCAAGA
ATGTTACTTCCTAAGGAAGTGGATGAGGAAGGCAATGAGGAAGATCCAAGAGCAGAGCTTGTTGAAAAGCTGTTAGAGTA
CAAGCTGTATAAGGCTATGGCACAGGAATTAAAGGACAAGCATACAGATGCAGAGAGAACCTATTATAAGAAGCAGAGTA
TTCCGGAGGCGGTTGCAGCATATACACCGCCGGTTGATCTTACAGAGGTTATTGGTGATACAACACTTATGCGTCTTAAC
AGAATATTTGCTGATGTTTGTAAACGTAAGGAAGATAAGATAGATCCTGTACGAAGCAAGTTTGGAAAGATTGAGAAAGA
AGAAGTTACCATGAGTGAAAAGCTTGTGGATATTAAAGCATTTATGATGGAGCATGAAGCTTTTAGTTTTAGGGAGCTTT
TGTGGAATAATCCGTCAAAGGTTGCTGTTATAGTAACATTTTTAGTTGTGTTAGAGCTTATTAAGACTGGATTTGTTGAG
GTTAAGCAGGAATGCCCGGAGGATGATATATTCATAAGGGTGGTCAGGGATCCTGAGCTTATTGAAGATATAACAGAGGA
GTAG

Upstream 100 bases:

>100_bases
CCTTAATTGAATGTTTTCAAGATATTATATGTTATTTTATAGAATTTAGCAATTACTTGCAAACAGCAGTTATTTTATGT
AAAATGTGATACGTGTAATT

Downstream 100 bases:

>100_bases
AATGATGAGTTTAGAACAGATGGAAGGCATAATTGAGGCTGTGCTTTTTACTATGGGTGATTCTGTGGAAGCAGGTAAGC
TTGCAGATGCTATAGAACAG

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MHSKYSEADMGISVKLQVFEGPLDLLLHLIDKNKVNIYDIPIAMITEQYMEYVEQLKKEDLNVVSEFLVMAATLLDIKSR
MLLPKEVDEEGNEEDPRAELVEKLLEYKLYKAMAQELKDKHTDAERTYYKKQSIPEAVAAYTPPVDLTEVIGDTTLMRLN
RIFADVCKRKEDKIDPVRSKFGKIEKEEVTMSEKLVDIKAFMMEHEAFSFRELLWNNPSKVAVIVTFLVVLELIKTGFVE
VKQECPEDDIFIRVVRDPELIEDITEE

Sequences:

>Translated_267_residues
MHSKYSEADMGISVKLQVFEGPLDLLLHLIDKNKVNIYDIPIAMITEQYMEYVEQLKKEDLNVVSEFLVMAATLLDIKSR
MLLPKEVDEEGNEEDPRAELVEKLLEYKLYKAMAQELKDKHTDAERTYYKKQSIPEAVAAYTPPVDLTEVIGDTTLMRLN
RIFADVCKRKEDKIDPVRSKFGKIEKEEVTMSEKLVDIKAFMMEHEAFSFRELLWNNPSKVAVIVTFLVVLELIKTGFVE
VKQECPEDDIFIRVVRDPELIEDITEE
>Mature_267_residues
MHSKYSEADMGISVKLQVFEGPLDLLLHLIDKNKVNIYDIPIAMITEQYMEYVEQLKKEDLNVVSEFLVMAATLLDIKSR
MLLPKEVDEEGNEEDPRAELVEKLLEYKLYKAMAQELKDKHTDAERTYYKKQSIPEAVAAYTPPVDLTEVIGDTTLMRLN
RIFADVCKRKEDKIDPVRSKFGKIEKEEVTMSEKLVDIKAFMMEHEAFSFRELLWNNPSKVAVIVTFLVVLELIKTGFVE
VKQECPEDDIFIRVVRDPELIEDITEE

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 30983; Mature: 30983

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSKYSEADMGISVKLQVFEGPLDLLLHLIDKNKVNIYDIPIAMITEQYMEYVEQLKKED
CCCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHH
LNVVSEFLVMAATLLDIKSRMLLPKEVDEEGNEEDPRAELVEKLLEYKLYKAMAQELKDK
HHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HTDAERTYYKKQSIPEAVAAYTPPVDLTEVIGDTTLMRLNRIFADVCKRKEDKIDPVRSK
CCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
FGKIEKEEVTMSEKLVDIKAFMMEHEAFSFRELLWNNPSKVAVIVTFLVVLELIKTGFVE
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VKQECPEDDIFIRVVRDPELIEDITEE
HHHHCCCCCEEEEEECCHHHHHHHHCC
>Mature Secondary Structure
MHSKYSEADMGISVKLQVFEGPLDLLLHLIDKNKVNIYDIPIAMITEQYMEYVEQLKKED
CCCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHH
LNVVSEFLVMAATLLDIKSRMLLPKEVDEEGNEEDPRAELVEKLLEYKLYKAMAQELKDK
HHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HTDAERTYYKKQSIPEAVAAYTPPVDLTEVIGDTTLMRLNRIFADVCKRKEDKIDPVRSK
CCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
FGKIEKEEVTMSEKLVDIKAFMMEHEAFSFRELLWNNPSKVAVIVTFLVVLELIKTGFVE
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VKQECPEDDIFIRVVRDPELIEDITEE
HHHHCCCCCEEEEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA