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The map label for this gene is yloC [H]

Identifier: 238917059

GI number: 238917059

Start: 1138813

End: 1139691

Strand: Reverse

Name: yloC [H]

Synonym: EUBELI_01129

Alternate gene names: 238917059

Gene position: 1139691-1138813 (Counterclockwise)

Preceding gene: 238917061

Following gene: 238917058

Centisome position: 53.15

GC content: 36.63

Gene sequence:

>879_bases
ATGATTAAAAGTATGACAGGCTTTGGCCGGAGTGAAATAGTTAAAGGTAACAGAAAAATTTCAGTTGAGATTAAGTCAGT
TAATCACAGATATCTTGAAGCAGGTATCAAGATGCCTAAGAAGCTTAATGTATTCGAGAGCAGAATGAGAGACTTACTTA
AGAAGTATGCAACAAGAGGCAAGATTGATATATTTATTAATTATGAGGATGATTCAGAAAGTCAGGTTAATCTTAAGTTC
AACCAGAATATAGCTGATGAATATATGGCTATATTTAATAATATGTCCGAAAAATACAATCTTAAAAATGATATGACTGT
TGGAGGTCTTGCCAGATTTCCAGAGGTTATCACAATGGATGAAGTGCAGGAAGACGAAGAGGAGCTGTGGCATTTTATAG
AGGAAGCCATGAAGGCAGCCTTAGAACAGTTTGTTAATACAAGAATTCTTGAAGGTGAGAATCTTAAGAAAGATCTTTTA
GGAAAGTTAGACCACATGGAGGAGCTTGTTGCATTTGTTGAAAAGAGAAGTCCTGAAATTATGAAGGAATACCGCAGCAA
GTTAGAGAGTAAGGTTAAAGAACTTCTTGGCGATACAACTATTGATGAGAGCAGAATCGCAACAGAGGTTATTATATACG
CAGACAAGATATGTGTTGACGAAGAAACTGTAAGATTAAGAAGCCATATCGAGCATGCAAGAAAATGTCTTAACGAGGAT
GGCGGCATTGGAAGAAAGATGGATTTCATTGCACAGGAGATGAACAGAGAGGCTAACACAACTCTATCTAAGGCTAATGA
CATTGAGATATCTAATGCAGCTATTGACTTAAAGACTGAGATTGAGAAGGTAAGAGAGCAGATTCAGAACATTGAGTAG

Upstream 100 bases:

>100_bases
TTGCATTATATTAACATACTTATTGCTGTAAGTCTTGTTATCTTTCACAAAAATTGGTATACTTTCCTAAGCATTATATG
CGAATGGAAGGATAGAAACA

Downstream 100 bases:

>100_bases
GCTTTCAATATATTTTTAATTGGTTTTGATTAAATTTACTTGATTGTTTCGGGCTTGTTAGGTATAATAACTTGTGCACT
TTATGTGCAGAATGAGGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MIKSMTGFGRSEIVKGNRKISVEIKSVNHRYLEAGIKMPKKLNVFESRMRDLLKKYATRGKIDIFINYEDDSESQVNLKF
NQNIADEYMAIFNNMSEKYNLKNDMTVGGLARFPEVITMDEVQEDEEELWHFIEEAMKAALEQFVNTRILEGENLKKDLL
GKLDHMEELVAFVEKRSPEIMKEYRSKLESKVKELLGDTTIDESRIATEVIIYADKICVDEETVRLRSHIEHARKCLNED
GGIGRKMDFIAQEMNREANTTLSKANDIEISNAAIDLKTEIEKVREQIQNIE

Sequences:

>Translated_292_residues
MIKSMTGFGRSEIVKGNRKISVEIKSVNHRYLEAGIKMPKKLNVFESRMRDLLKKYATRGKIDIFINYEDDSESQVNLKF
NQNIADEYMAIFNNMSEKYNLKNDMTVGGLARFPEVITMDEVQEDEEELWHFIEEAMKAALEQFVNTRILEGENLKKDLL
GKLDHMEELVAFVEKRSPEIMKEYRSKLESKVKELLGDTTIDESRIATEVIIYADKICVDEETVRLRSHIEHARKCLNED
GGIGRKMDFIAQEMNREANTTLSKANDIEISNAAIDLKTEIEKVREQIQNIE
>Mature_292_residues
MIKSMTGFGRSEIVKGNRKISVEIKSVNHRYLEAGIKMPKKLNVFESRMRDLLKKYATRGKIDIFINYEDDSESQVNLKF
NQNIADEYMAIFNNMSEKYNLKNDMTVGGLARFPEVITMDEVQEDEEELWHFIEEAMKAALEQFVNTRILEGENLKKDLL
GKLDHMEELVAFVEKRSPEIMKEYRSKLESKVKELLGDTTIDESRIATEVIIYADKICVDEETVRLRSHIEHARKCLNED
GGIGRKMDFIAQEMNREANTTLSKANDIEISNAAIDLKTEIEKVREQIQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=292, Percent_Identity=32.1917808219178, Blast_Score=152, Evalue=4e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33837; Mature: 33837

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSMTGFGRSEIVKGNRKISVEIKSVNHRYLEAGIKMPKKLNVFESRMRDLLKKYATRG
CCCCCCCCCHHHHHCCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
KIDIFINYEDDSESQVNLKFNQNIADEYMAIFNNMSEKYNLKNDMTVGGLARFPEVITMD
CEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHH
EVQEDEEELWHFIEEAMKAALEQFVNTRILEGENLKKDLLGKLDHMEELVAFVEKRSPEI
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
MKEYRSKLESKVKELLGDTTIDESRIATEVIIYADKICVDEETVRLRSHIEHARKCLNED
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
GGIGRKMDFIAQEMNREANTTLSKANDIEISNAAIDLKTEIEKVREQIQNIE
CCCCHHHHHHHHHHCCHHHHHHHCCCCCEECCCEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKSMTGFGRSEIVKGNRKISVEIKSVNHRYLEAGIKMPKKLNVFESRMRDLLKKYATRG
CCCCCCCCCHHHHHCCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
KIDIFINYEDDSESQVNLKFNQNIADEYMAIFNNMSEKYNLKNDMTVGGLARFPEVITMD
CEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHH
EVQEDEEELWHFIEEAMKAALEQFVNTRILEGENLKKDLLGKLDHMEELVAFVEKRSPEI
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
MKEYRSKLESKVKELLGDTTIDESRIATEVIIYADKICVDEETVRLRSHIEHARKCLNED
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
GGIGRKMDFIAQEMNREANTTLSKANDIEISNAAIDLKTEIEKVREQIQNIE
CCCCHHHHHHHHHHCCHHHHHHHCCCCCEECCCEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]