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The map label for this gene is nusB [H]

Identifier: 238917018

GI number: 238917018

Start: 1101699

End: 1102106

Strand: Reverse

Name: nusB [H]

Synonym: EUBELI_01088

Alternate gene names: 238917018

Gene position: 1102106-1101699 (Counterclockwise)

Preceding gene: 238917019

Following gene: 238917017

Centisome position: 51.4

GC content: 37.5

Gene sequence:

>408_bases
ATGAGGGAGCATATTTTTAAGTTATTATTCAGAGCTCCTTTTATCGATAACAAAGATGAGTATGAAGAGCAGATTAATCT
GTATTTTGCAGATGCAGATATGGTAGATGCTTCACATCTTAAGGAAGAAGAATATAATTACATCAAGGATAAGACATTAG
CAATAGCAGAGCTTATACCTGAGCTTGATGAGAAAATCGATTCTGTATCTGAGGGATGGCCAACAAGCCGTCTAGGAAAG
ACAGAGCTTTCTATTATGAGACTTGCTGTGTATGAGATGCTTTATGATGAGGATATTCCTACTAATGTAGCACTCAATGA
AGCTGTTGAGCTTGCCAAGAAGTATGGCTCGGCTGACAGCACAGCAGCTTTTGTTAATGGTGTATTAGGCAAGTTAATTA
AAGAGTAA

Upstream 100 bases:

>100_bases
GAGACAATGACAGGACTTTCAGTTACAGAGGTCAACATTAAGGTTGCCAGTGTTAATGTAGAAAATTAAATTCAGGAGTT
AAAAGATGACAAGATCTACA

Downstream 100 bases:

>100_bases
TGCAGTTTTTTGCATGTAAAGTGAGGATATATGGCTGGAGTATATACTGTAAAGCAGGTGAATTCCTATATTAAGAATAT
GTTTAAGCAGGATTTTCTGC

Product: N utilization substance protein B

Products: NA

Alternate protein names: Protein nusB [H]

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MREHIFKLLFRAPFIDNKDEYEEQINLYFADADMVDASHLKEEEYNYIKDKTLAIAELIPELDEKIDSVSEGWPTSRLGK
TELSIMRLAVYEMLYDEDIPTNVALNEAVELAKKYGSADSTAAFVNGVLGKLIKE

Sequences:

>Translated_135_residues
MREHIFKLLFRAPFIDNKDEYEEQINLYFADADMVDASHLKEEEYNYIKDKTLAIAELIPELDEKIDSVSEGWPTSRLGK
TELSIMRLAVYEMLYDEDIPTNVALNEAVELAKKYGSADSTAAFVNGVLGKLIKE
>Mature_135_residues
MREHIFKLLFRAPFIDNKDEYEEQINLYFADADMVDASHLKEEEYNYIKDKTLAIAELIPELDEKIDSVSEGWPTSRLGK
TELSIMRLAVYEMLYDEDIPTNVALNEAVELAKKYGSADSTAAFVNGVLGKLIKE

Specific function: Involved in the transcription termination process [H]

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family [H]

Homologues:

None

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011605
- InterPro:   IPR006027 [H]

Pfam domain/function: PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 15426; Mature: 15426

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREHIFKLLFRAPFIDNKDEYEEQINLYFADADMVDASHLKEEEYNYIKDKTLAIAELIP
CHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELDEKIDSVSEGWPTSRLGKTELSIMRLAVYEMLYDEDIPTNVALNEAVELAKKYGSADS
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCH
TAAFVNGVLGKLIKE
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MREHIFKLLFRAPFIDNKDEYEEQINLYFADADMVDASHLKEEEYNYIKDKTLAIAELIP
CHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELDEKIDSVSEGWPTSRLGKTELSIMRLAVYEMLYDEDIPTNVALNEAVELAKKYGSADS
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCH
TAAFVNGVLGKLIKE
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA