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The map label for this gene is ftsY [H]

Identifier: 238916988

GI number: 238916988

Start: 1066844

End: 1067779

Strand: Reverse

Name: ftsY [H]

Synonym: EUBELI_01057

Alternate gene names: 238916988

Gene position: 1067779-1066844 (Counterclockwise)

Preceding gene: 238916989

Following gene: 238916987

Centisome position: 49.8

GC content: 37.71

Gene sequence:

>936_bases
ATGGGATTTTTCAGTAAATTAAAAGAAGGTTTAACCAAGACAAGAGATAATATTGTTTCCGGAATTGATTCTGTTTTCTC
AGGATTTTCGTCAATTGATGACGATTTCTATGATGAGCTTGAAGAAACCCTTATTATGGGTGATATAGGTGTTGTTGCAA
CTGAAGAGATTCTTGACGACCTTAAGAATAAGGTTAAAGAAAATAAGATTAAGAATCCTGCTGACTGCAAGCAGCTTCTT
ATTGACAGCATTAAGGAAAAGATGAATCTCGGCGAAAATGCATATGAATTTGAGAATCGCAAATCCATTGTTATGCTTAT
CGGCGTTAATGGTGTAGGAAAAACTACATCTGTAGGCAAACTTGCCGGTCTTCTTAAAGCACAAAACAAGAAGGTTATTA
TGGCTGCAGCCGATACTTTCAGAGCTGCGGCTATAGAGCAGCTTACAGAATGGTCTAACAGAACTGGTGCTGATATTATT
GCACAGAGTGAGGGTTCTGATCCAGCTGCCGTTATATATGATTCAATCGCTGCATGTAAAGCAAGAAAGGCAGATGTTCT
TTTATGTGATACAGCTGGACGTCTTCAGAATAAGAAGAATCTTATGGAAGAGCTTCGTAAGATTGACAGAGTTATAGAAA
GAGAGTATTCTGATGCATACAGGGAAAATCTTATCGTTCTTGACGCAACAACTGGTCAGAACGCCCTTTCTCAGCTTAGA
GAGTTTAATGATGTAACTAATATCACAGGTATTATTCTTACTAAGATGGATGGAACTGCCAAAGGGGGAATTGCCGTTGC
TATACAGGCAGAATTTGGTATTCCTGTTAAATATATTGGAGTTGGTGAGAAAGTCGAAGATTTACAGAAGTTTGATTCAG
ACACATTTGTTAATGCATTATTCGATGTAGATAACGGCTCTGATGAAGATAGATAA

Upstream 100 bases:

>100_bases
CTGACAGACTCTATGGTATAACTATGCAGGAGAAGGGTGTATCTGCACTTGTTTCTGTAGACCTTATAGCTAATGACCTT
GACAAGAAGAAGGAGTAAAT

Downstream 100 bases:

>100_bases
GTTAATAAATTAAGATGGGAGATTAAGTGTAATGGAAGAATTAACATTGAAAAGTTTCGAGGAAGCTGCCGAGAAGGTTA
AGGAAGCAACACTTCCTACT

Product: signal recognition particle receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MGFFSKLKEGLTKTRDNIVSGIDSVFSGFSSIDDDFYDELEETLIMGDIGVVATEEILDDLKNKVKENKIKNPADCKQLL
IDSIKEKMNLGENAYEFENRKSIVMLIGVNGVGKTTSVGKLAGLLKAQNKKVIMAAADTFRAAAIEQLTEWSNRTGADII
AQSEGSDPAAVIYDSIAACKARKADVLLCDTAGRLQNKKNLMEELRKIDRVIEREYSDAYRENLIVLDATTGQNALSQLR
EFNDVTNITGIILTKMDGTAKGGIAVAIQAEFGIPVKYIGVGEKVEDLQKFDSDTFVNALFDVDNGSDEDR

Sequences:

>Translated_311_residues
MGFFSKLKEGLTKTRDNIVSGIDSVFSGFSSIDDDFYDELEETLIMGDIGVVATEEILDDLKNKVKENKIKNPADCKQLL
IDSIKEKMNLGENAYEFENRKSIVMLIGVNGVGKTTSVGKLAGLLKAQNKKVIMAAADTFRAAAIEQLTEWSNRTGADII
AQSEGSDPAAVIYDSIAACKARKADVLLCDTAGRLQNKKNLMEELRKIDRVIEREYSDAYRENLIVLDATTGQNALSQLR
EFNDVTNITGIILTKMDGTAKGGIAVAIQAEFGIPVKYIGVGEKVEDLQKFDSDTFVNALFDVDNGSDEDR
>Mature_310_residues
GFFSKLKEGLTKTRDNIVSGIDSVFSGFSSIDDDFYDELEETLIMGDIGVVATEEILDDLKNKVKENKIKNPADCKQLLI
DSIKEKMNLGENAYEFENRKSIVMLIGVNGVGKTTSVGKLAGLLKAQNKKVIMAAADTFRAAAIEQLTEWSNRTGADIIA
QSEGSDPAAVIYDSIAACKARKADVLLCDTAGRLQNKKNLMEELRKIDRVIEREYSDAYRENLIVLDATTGQNALSQLRE
FNDVTNITGIILTKMDGTAKGGIAVAIQAEFGIPVKYIGVGEKVEDLQKFDSDTFVNALFDVDNGSDEDR

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI226371618, Length=205, Percent_Identity=29.2682926829268, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI4507215, Length=269, Percent_Identity=25.6505576208178, Blast_Score=115, Evalue=4e-26,
Organism=Homo sapiens, GI23308697, Length=303, Percent_Identity=28.7128712871287, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI295424842, Length=303, Percent_Identity=28.7128712871287, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI89061728, Length=136, Percent_Identity=29.4117647058824, Blast_Score=80, Evalue=3e-15,
Organism=Escherichia coli, GI1789874, Length=301, Percent_Identity=47.1760797342193, Blast_Score=273, Evalue=1e-74,
Organism=Escherichia coli, GI1788963, Length=309, Percent_Identity=31.3915857605178, Blast_Score=153, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17539958, Length=273, Percent_Identity=24.9084249084249, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI193206261, Length=299, Percent_Identity=28.0936454849498, Blast_Score=108, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=213, Percent_Identity=36.6197183098592, Blast_Score=137, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6320498, Length=229, Percent_Identity=30.1310043668122, Blast_Score=88, Evalue=2e-18,
Organism=Drosophila melanogaster, GI17647949, Length=213, Percent_Identity=31.924882629108, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24641198, Length=328, Percent_Identity=27.7439024390244, Blast_Score=100, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 34085; Mature: 33954

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFFSKLKEGLTKTRDNIVSGIDSVFSGFSSIDDDFYDELEETLIMGDIGVVATEEILDD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
LKNKVKENKIKNPADCKQLLIDSIKEKMNLGENAYEFENRKSIVMLIGVNGVGKTTSVGK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEECCCCCCCCHHHH
LAGLLKAQNKKVIMAAADTFRAAAIEQLTEWSNRTGADIIAQSEGSDPAAVIYDSIAACK
HHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHH
ARKADVLLCDTAGRLQNKKNLMEELRKIDRVIEREYSDAYRENLIVLDATTGQNALSQLR
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHH
EFNDVTNITGIILTKMDGTAKGGIAVAIQAEFGIPVKYIGVGEKVEDLQKFDSDTFVNAL
HHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCEEEECCCHHHHHHHHCCCHHHHHHH
FDVDNGSDEDR
EECCCCCCCCC
>Mature Secondary Structure 
GFFSKLKEGLTKTRDNIVSGIDSVFSGFSSIDDDFYDELEETLIMGDIGVVATEEILDD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
LKNKVKENKIKNPADCKQLLIDSIKEKMNLGENAYEFENRKSIVMLIGVNGVGKTTSVGK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEECCCCCCCCHHHH
LAGLLKAQNKKVIMAAADTFRAAAIEQLTEWSNRTGADIIAQSEGSDPAAVIYDSIAACK
HHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHH
ARKADVLLCDTAGRLQNKKNLMEELRKIDRVIEREYSDAYRENLIVLDATTGQNALSQLR
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHH
EFNDVTNITGIILTKMDGTAKGGIAVAIQAEFGIPVKYIGVGEKVEDLQKFDSDTFVNAL
HHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCEEEECCCHHHHHHHHCCCHHHHHHH
FDVDNGSDEDR
EECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983 [H]