| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is engA
Identifier: 238916971
GI number: 238916971
Start: 1053180
End: 1054505
Strand: Reverse
Name: engA
Synonym: EUBELI_01040
Alternate gene names: 238916971
Gene position: 1054505-1053180 (Counterclockwise)
Preceding gene: 238916973
Following gene: 238916970
Centisome position: 49.18
GC content: 36.73
Gene sequence:
>1326_bases ATGAGTAAACCAATAGTTGCTGTTGTCGGAAGACCTAATGTTGGAAAATCAACATTATTCAACAGTCTGTGCGGACAACA GATTTCAATAGTTAAAGATACACCGGGTGTTACAAGAGACAGAATTTATGCAGAGGTAAGCTGGTTAAACCACAATTTTA CACTTATAGATACCGGTGGTATAGAGCCGGATACAGGTGATATTATCCTTTCGCAGATGCGTGAACAGGCTGAGATTGCC ATTGAAACTGCGGATGTAATTATATTTATGACTGATGTTAAGCAGGGACTTGTAGATTCAGATTCTAAGGTTGCTGATAT GTTAAGACGCTCACACAAGCCTGTTATTCTTGTTGTCAATAAAGTTGACAGCTTTGAGAAGATGATGCCTGATGTATATG AATTCTATAATCTTGGAATTGGAGAACCATTTCCTATATCAGCCGTTAATAAGTTAGGTTTTGGTGAAGTACTTGATGAA GTGGTAAGTCATTTCCCAGAGGGTTCAGATACTGATAAAGAAGATGACAGACCTAAGGTGGCTATAATAGGTAAGCCTAA TGTTGGTAAGTCATCTATAATCAATAAGCTTGTAGGCAAGAACAGAGTTATTGTATCTGATATTGCCGGTACAACAAGAG ATGCTATTGACACAGCTATCAAATATAATGGTAAAGAATATGTATTTATTGATACAGCGGGACTACGCCGTAAGAGTAAG ATTAAAGAAGATCTGGAGCGTTTTAGTATCATAAGAACTGTTGCAGCAGTTGAAAGAGCTGATATTGCAATTCTTGTTAT TGATGCTACGGAAGGTGTTACAGAGCAGGATGCCAAGATAGCCGGAATAGCGCATGAAAGAGGCAAGGGTATTATTATTG CTGTTAACAAATGGGATGATATAGAGAAGAATGACAAGACTATCTATGAGTTTACGAATAAGATTAAAGATACTCTTGCA TTTATGTCATATGCTGAGATTATATTTGTTTCTGCCAAGACAGGTCAGAGACTTAATAAAATATATGAATTAGTTGATCA CATTGTTGATGCACAGACTATGCGTATTCCTACCGGTGTGCTTAATGAAATTCTTACAGAAGCAGTTGCAATGAAGCAGC CACCTTCAGATAAGGGTAAGAGACTTAAAATCTATTACATGACTCAGGTTTCGGTAAAACCACCGACATTTGTTATGTTT GTTAATGATGTAGCACTCACACATTTTTCTTATACAAGATATATAGAAAACAGAATAAGAGAATCCTTTGGATTCAGAGG TACATCTATCAGATTCATCAACAGAGAACGTAAGGAGAAAGAGTAA
Upstream 100 bases:
>100_bases TGATATCACAGTGCTTTACAAAAAGCAATTAAACTGATATTATATTATAGATTGCGTGTATTAATTTTTTGTAAATTTGC TATAAGAGCAAGGAGGAATT
Downstream 100 bases:
>100_bases TGTTATTTAAAATAGGTGTTCTTATATATGGATATTTTGCCGGAGCACTCATTCAGGCAGGATACTGGATGGGAAAGTTC AATAAGATTGACATCAGGGA
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MSKPIVAVVGRPNVGKSTLFNSLCGQQISIVKDTPGVTRDRIYAEVSWLNHNFTLIDTGGIEPDTGDIILSQMREQAEIA IETADVIIFMTDVKQGLVDSDSKVADMLRRSHKPVILVVNKVDSFEKMMPDVYEFYNLGIGEPFPISAVNKLGFGEVLDE VVSHFPEGSDTDKEDDRPKVAIIGKPNVGKSSIINKLVGKNRVIVSDIAGTTRDAIDTAIKYNGKEYVFIDTAGLRRKSK IKEDLERFSIIRTVAAVERADIAILVIDATEGVTEQDAKIAGIAHERGKGIIIAVNKWDDIEKNDKTIYEFTNKIKDTLA FMSYAEIIFVSAKTGQRLNKIYELVDHIVDAQTMRIPTGVLNEILTEAVAMKQPPSDKGKRLKIYYMTQVSVKPPTFVMF VNDVALTHFSYTRYIENRIRESFGFRGTSIRFINRERKEKE
Sequences:
>Translated_441_residues MSKPIVAVVGRPNVGKSTLFNSLCGQQISIVKDTPGVTRDRIYAEVSWLNHNFTLIDTGGIEPDTGDIILSQMREQAEIA IETADVIIFMTDVKQGLVDSDSKVADMLRRSHKPVILVVNKVDSFEKMMPDVYEFYNLGIGEPFPISAVNKLGFGEVLDE VVSHFPEGSDTDKEDDRPKVAIIGKPNVGKSSIINKLVGKNRVIVSDIAGTTRDAIDTAIKYNGKEYVFIDTAGLRRKSK IKEDLERFSIIRTVAAVERADIAILVIDATEGVTEQDAKIAGIAHERGKGIIIAVNKWDDIEKNDKTIYEFTNKIKDTLA FMSYAEIIFVSAKTGQRLNKIYELVDHIVDAQTMRIPTGVLNEILTEAVAMKQPPSDKGKRLKIYYMTQVSVKPPTFVMF VNDVALTHFSYTRYIENRIRESFGFRGTSIRFINRERKEKE >Mature_440_residues SKPIVAVVGRPNVGKSTLFNSLCGQQISIVKDTPGVTRDRIYAEVSWLNHNFTLIDTGGIEPDTGDIILSQMREQAEIAI ETADVIIFMTDVKQGLVDSDSKVADMLRRSHKPVILVVNKVDSFEKMMPDVYEFYNLGIGEPFPISAVNKLGFGEVLDEV VSHFPEGSDTDKEDDRPKVAIIGKPNVGKSSIINKLVGKNRVIVSDIAGTTRDAIDTAIKYNGKEYVFIDTAGLRRKSKI KEDLERFSIIRTVAAVERADIAILVIDATEGVTEQDAKIAGIAHERGKGIIIAVNKWDDIEKNDKTIYEFTNKIKDTLAF MSYAEIIFVSAKTGQRLNKIYELVDHIVDAQTMRIPTGVLNEILTEAVAMKQPPSDKGKRLKIYYMTQVSVKPPTFVMFV NDVALTHFSYTRYIENRIRESFGFRGTSIRFINRERKEKE
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=467, Percent_Identity=38.7580299785867, Blast_Score=321, Evalue=6e-89, Organism=Escherichia coli, GI1788919, Length=179, Percent_Identity=33.5195530726257, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI2367268, Length=92, Percent_Identity=45.6521739130435, Blast_Score=80, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17507259, Length=136, Percent_Identity=36.0294117647059, Blast_Score=69, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6323665, Length=163, Percent_Identity=37.4233128834356, Blast_Score=83, Evalue=7e-17, Organism=Drosophila melanogaster, GI45550813, Length=110, Percent_Identity=37.2727272727273, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_EUBE2 (C4Z0C8)
Other databases:
- EMBL: CP001104 - RefSeq: YP_002930488.1 - GeneID: 7958454 - GenomeReviews: CP001104_GR - KEGG: eel:EUBELI_01040 - OMA: KCEKAFD - ProtClustDB: PRK00093 - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - SMART: SM00382 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 49402; Mature: 49271
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPIVAVVGRPNVGKSTLFNSLCGQQISIVKDTPGVTRDRIYAEVSWLNHNFTLIDTGG CCCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCHHHEEEEEEEECCCEEEEECCC IEPDTGDIILSQMREQAEIAIETADVIIFMTDVKQGLVDSDSKVADMLRRSHKPVILVVN CCCCCHHHHHHHHHHHHHEEEEECCEEEEEECHHHCCCCCCHHHHHHHHHCCCCEEEEEE KVDSFEKMMPDVYEFYNLGIGEPFPISAVNKLGFGEVLDEVVSHFPEGSDTDKEDDRPKV CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCE AIIGKPNVGKSSIINKLVGKNRVIVSDIAGTTRDAIDTAIKYNGKEYVFIDTAGLRRKSK EEEECCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHEECCCEEEEEECCCCCHHHH IKEDLERFSIIRTVAAVERADIAILVIDATEGVTEQDAKIAGIAHERGKGIIIAVNKWDD HHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCC IEKNDKTIYEFTNKIKDTLAFMSYAEIIFVSAKTGQRLNKIYELVDHIVDAQTMRIPTGV CCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHCCHHEECCHHH LNEILTEAVAMKQPPSDKGKRLKIYYMTQVSVKPPTFVMFVNDVALTHFSYTRYIENRIR HHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHH ESFGFRGTSIRFINRERKEKE HHHCCCCCEEEEECCCCCCCC >Mature Secondary Structure SKPIVAVVGRPNVGKSTLFNSLCGQQISIVKDTPGVTRDRIYAEVSWLNHNFTLIDTGG CCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCHHHEEEEEEEECCCEEEEECCC IEPDTGDIILSQMREQAEIAIETADVIIFMTDVKQGLVDSDSKVADMLRRSHKPVILVVN CCCCCHHHHHHHHHHHHHEEEEECCEEEEEECHHHCCCCCCHHHHHHHHHCCCCEEEEEE KVDSFEKMMPDVYEFYNLGIGEPFPISAVNKLGFGEVLDEVVSHFPEGSDTDKEDDRPKV CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCE AIIGKPNVGKSSIINKLVGKNRVIVSDIAGTTRDAIDTAIKYNGKEYVFIDTAGLRRKSK EEEECCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHEECCCEEEEEECCCCCHHHH IKEDLERFSIIRTVAAVERADIAILVIDATEGVTEQDAKIAGIAHERGKGIIIAVNKWDD HHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCC IEKNDKTIYEFTNKIKDTLAFMSYAEIIFVSAKTGQRLNKIYELVDHIVDAQTMRIPTGV CCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHCCHHEECCHHH LNEILTEAVAMKQPPSDKGKRLKIYYMTQVSVKPPTFVMFVNDVALTHFSYTRYIENRIR HHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHH ESFGFRGTSIRFINRERKEKE HHHCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA