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The map label for this gene is yxdK [H]

Identifier: 238916799

GI number: 238916799

Start: 881044

End: 882102

Strand: Direct

Name: yxdK [H]

Synonym: EUBELI_00866

Alternate gene names: 238916799

Gene position: 881044-882102 (Clockwise)

Preceding gene: 238916798

Following gene: 238916800

Centisome position: 41.09

GC content: 36.73

Gene sequence:

>1059_bases
ATGAGGTTAGGAAAATATATTAAAGACAGACTGTATTCAGTGTGCATATTTGTGGCAATGCTTATCATAAGCGTACTTAT
GATGGCGGCATTCAAGGTGTCTGTCCAGTTAATAATTGCAGAAATATTTATAATGATAATATGCTATATTGCAGTTGTGC
TGGCAGATTATTACCACAGAAAGAAGTTCTATGACGAACTGGAGATTAACATAGCTGCACTTGAAGAAAAATATCTTATT
ACAGAGACACTTGTCAGGCCGGCTTTCTATGAAGGGCAGATTTTCTATGATTCTGTGAGTGACATAGACAGGTCGATGAC
GGAGAATGTTAAACGATACAGGCAGGGAATGGAGCAGTTCAAAGAGTATGTTGAAATGTGGATTCATGAGATAAAGCTTC
CGATAGCCTCACTTACACTTATGCTTCATAATAACATGGATAAATGTGATAAAGAATTTGCGGACAGGATGAATACGCAG
ATTCGCAGAATCAATAACTATATTGAGCAGATTCTTTATTATGTGAGAAGCGAAAATGCAGAAAAAGACTATATAATTAA
CGATGCCAGACTGTCTAAGATTATAAGTAATGTAGCATTAAAGAATAAGTATGATCTGCTTGAAAATGATATCACATTTG
AAGTGAGCAATGCAGACAGGATTGTTCTTACAGATGCAAAGTGGATGGAATTCATGCTTAACCAGATAGTGAATAACAGC
ATAAAGTACAAGGATAAGACAAAGGCAGAGTCGTATATAAAGATGTCGGCAGCAGAGGATAAAAAATGTGTTGTCCTTGA
AATACTGGATAATGGAATTGGCATAAATGCGTCAGATTTGCCGAGAGTTTTTGACAAATCATTTACAGGGGAGAATGGAA
GAGAGTTCTCCAAGGCAACAGGAATGGGACTTTATATTGTAAAGAAGCTTTGTGACAAGTTAGGACATGCCATAACCATT
GAGTCGGTAAAGGGCGAATATACACGGGTGAAGATTACATTTTACAAGAATGATTTCTATAAGGAGATAACAGACAGCAA
TGAAAGTGGCAGTATGTGA

Upstream 100 bases:

>100_bases
ATGCGCTTACTGTGAATATAAGCAGGTTAAGAGGCAGATTTAAAGATATTGGACTTGAAGATGTTATTGAGACAAGAAAG
GGACAGGGATATATTCTTGT

Downstream 100 bases:

>100_bases
TGACAACAGAGAGTTCTGTGAGAAGGAACGGACGACTATAAAAGATGTATTTAAGCAGTATTTTCAGGGAGAAGATTGTC
AGGTGGATATCTACAATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MRLGKYIKDRLYSVCIFVAMLIISVLMMAAFKVSVQLIIAEIFIMIICYIAVVLADYYHRKKFYDELEINIAALEEKYLI
TETLVRPAFYEGQIFYDSVSDIDRSMTENVKRYRQGMEQFKEYVEMWIHEIKLPIASLTLMLHNNMDKCDKEFADRMNTQ
IRRINNYIEQILYYVRSENAEKDYIINDARLSKIISNVALKNKYDLLENDITFEVSNADRIVLTDAKWMEFMLNQIVNNS
IKYKDKTKAESYIKMSAAEDKKCVVLEILDNGIGINASDLPRVFDKSFTGENGREFSKATGMGLYIVKKLCDKLGHAITI
ESVKGEYTRVKITFYKNDFYKEITDSNESGSM

Sequences:

>Translated_352_residues
MRLGKYIKDRLYSVCIFVAMLIISVLMMAAFKVSVQLIIAEIFIMIICYIAVVLADYYHRKKFYDELEINIAALEEKYLI
TETLVRPAFYEGQIFYDSVSDIDRSMTENVKRYRQGMEQFKEYVEMWIHEIKLPIASLTLMLHNNMDKCDKEFADRMNTQ
IRRINNYIEQILYYVRSENAEKDYIINDARLSKIISNVALKNKYDLLENDITFEVSNADRIVLTDAKWMEFMLNQIVNNS
IKYKDKTKAESYIKMSAAEDKKCVVLEILDNGIGINASDLPRVFDKSFTGENGREFSKATGMGLYIVKKLCDKLGHAITI
ESVKGEYTRVKITFYKNDFYKEITDSNESGSM
>Mature_352_residues
MRLGKYIKDRLYSVCIFVAMLIISVLMMAAFKVSVQLIIAEIFIMIICYIAVVLADYYHRKKFYDELEINIAALEEKYLI
TETLVRPAFYEGQIFYDSVSDIDRSMTENVKRYRQGMEQFKEYVEMWIHEIKLPIASLTLMLHNNMDKCDKEFADRMNTQ
IRRINNYIEQILYYVRSENAEKDYIINDARLSKIISNVALKNKYDLLENDITFEVSNADRIVLTDAKWMEFMLNQIVNNS
IKYKDKTKAESYIKMSAAEDKKCVVLEILDNGIGINASDLPRVFDKSFTGENGREFSKATGMGLYIVKKLCDKLGHAITI
ESVKGEYTRVKITFYKNDFYKEITDSNESGSM

Specific function: Probable member of the two-component regulatory system yxdK/yxdJ. May activate yxdJ in response to the antibacterial protein LL-37 [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1790861, Length=223, Percent_Identity=25.1121076233184, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467 [H]

Pfam domain/function: PF02518 HATPase_c [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 41054; Mature: 41054

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLGKYIKDRLYSVCIFVAMLIISVLMMAAFKVSVQLIIAEIFIMIICYIAVVLADYYHR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKFYDELEINIAALEEKYLITETLVRPAFYEGQIFYDSVSDIDRSMTENVKRYRQGMEQF
HHHHHHHHEEHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH
KEYVEMWIHEIKLPIASLTLMLHNNMDKCDKEFADRMNTQIRRINNYIEQILYYVRSENA
HHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EKDYIINDARLSKIISNVALKNKYDLLENDITFEVSNADRIVLTDAKWMEFMLNQIVNNS
CCCEEECHHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCEEEEECHHHHHHHHHHHHCCC
IKYKDKTKAESYIKMSAAEDKKCVVLEILDNGIGINASDLPRVFDKSFTGENGREFSKAT
CCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHC
GMGLYIVKKLCDKLGHAITIESVKGEYTRVKITFYKNDFYKEITDSNESGSM
CCHHHHHHHHHHHHCCEEEEECCCCCEEEEEEEEECCHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRLGKYIKDRLYSVCIFVAMLIISVLMMAAFKVSVQLIIAEIFIMIICYIAVVLADYYHR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKFYDELEINIAALEEKYLITETLVRPAFYEGQIFYDSVSDIDRSMTENVKRYRQGMEQF
HHHHHHHHEEHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH
KEYVEMWIHEIKLPIASLTLMLHNNMDKCDKEFADRMNTQIRRINNYIEQILYYVRSENA
HHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EKDYIINDARLSKIISNVALKNKYDLLENDITFEVSNADRIVLTDAKWMEFMLNQIVNNS
CCCEEECHHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCEEEEECHHHHHHHHHHHHCCC
IKYKDKTKAESYIKMSAAEDKKCVVLEILDNGIGINASDLPRVFDKSFTGENGREFSKAT
CCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHC
GMGLYIVKKLCDKLGHAITIESVKGEYTRVKITFYKNDFYKEITDSNESGSM
CCHHHHHHHHHHHHCCEEEEECCCCCEEEEEEEEECCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7952181; 9384377; 8867804 [H]