| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is 238916779
Identifier: 238916779
GI number: 238916779
Start: 854164
End: 855771
Strand: Direct
Name: 238916779
Synonym: EUBELI_00841
Alternate gene names: NA
Gene position: 854164-855771 (Clockwise)
Preceding gene: 238916778
Following gene: 238916780
Centisome position: 39.84
GC content: 38.37
Gene sequence:
>1608_bases ATGATAGATAACTGCAGGACTGGATATTTTCAATTTGATGCTAGACAAGACGGACTGTATTTTATAGTTTTTCCTCCAAA GGATGGAAACAGACCGGTAAGTATTGATGATGTATTGTACTACATTGAAAAGAAGAAGATAAATTGTGACACTGTAAAAC TCGGTGAGGCTGTTAAGGCAGGCTGTAATACAGAAACAGAAGTTAAAGTATCTGAAGAGATAGTTCATCCGTATGCTGAA TTTGTCGATTACCGTATAAGTGCAGACTGTATGAGAGCAGAAGCGGTTTTTTATCCGCCTTTTGTAGGAGCTGATATGCT CACAATGGAAGAAATCGTAAAAGATTTACAGTATTTGGGCATTAAACATGGTATAGATAATAACAGTATTGAGCAGATGC TTTCGGTCAGGGAATATGGTAAGGCATATAATGTAGCTGCAGGAACTGCACCACGGGATGGACAAGACGGATATATTGAA TATAAGTTTAATACTGAATTGAAGCCGCGCCCAAAGATAAATGATGATGGCACTGTGGATTTTCACACGCTTGAGAATAT TAATCATGTTAACAAAGGCGATGTTGTAGCTGTGCTGCACAGAGAGGACAGAGGAGATGACGGCATAGATTTATTAGGGC GAAGAGTACTGCCTAAAAAGGTTAATCATGTGGTGTTCAGACATGGTAAAAATCTTGTTCAGTCAGAGGATGGTAAAGAA CTCATATCACAGGTTAGTGGGCATGTGGTATTAGAAGGCGATAAAATATTTGTTTCAAATGTACTTGAACTTGTTAATGT TGATAATTCTACAGGTGATATAGATTATGACGGAGATGTAGTAATAAAAGGCAATGTGGTTGCTGGCTTTACTGTGAAGG CAGCAGGTAATATAACTGTAAGTGGAATTGTTGAAGGAGCTACGGTTATTGCTGGTGGTTCAATTACATTTAACAGAGGA ATCCAGGGTATGACAAAGGCTGTAGTAAAGGCTGGCGGAAGTATTGTTTCCAAATTCATAGAAAGTGCTGAAAGCGTATC GGCAGGTGGAAGCATTGAGGCGGATTCTATCCTGCATAGTAAAGTTACATCCAAGGAAACTATAAAGGCTTCGGGAAAGA ATGGTCTGATAATCGGTGGGGATGTAAAAGCAGTATATATGATTGAGGCTAAGGCAATAGGTAATACAATGGGAACCAAT ACGACAGTAGGTGTTGGCGTTAATCCTGCGATGAAGAGAAGAGTGGATGAATTAAAGAACAGCCTTGATAAGCTTGGAAA TAATAAAATCCAGTTGGATCAGCTTCTTTCTGCTATTAGAAAAAAACAGGAACTGGAAGGCAGTCTTGATGCGGAAAAAC ATGAACTCCAGACTAAAACAATGCGTAATGTCATAATGCTTGAGCAGGAGATAACAAAACAGAAGAAAGAACTTGAAGAA TTAAGAAAACAGATAGGCGAAGAAAAGCGGGCATGTATAAAGGTTTATGATGCAGCATATGTAGGAGTTAAACTGGTGTT CGGAGATCAATGTATGTTCCTTAAAAAGAAATATGATTATTGTCAGTTTGTTAAAGAAGGAGCAGATATTAAATGCGTTG CAATTTAG
Upstream 100 bases:
>100_bases AGTATCACAGCTACATACCAAAGCACTTAATAAAATGAAAAAATTATTAGGTGATTATGTATTTACTTTATAACATATAA TTTTAAAAGGGGATTATGGC
Downstream 100 bases:
>100_bases AACGCATTTGAATGGAGGTATCATATGGTTATTAAGCCGATAGAATTCGCGATGATACAGCAGCAGAACAATGTTTCTAA ATCACAACATAATATAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 535; Mature: 535
Protein sequence:
>535_residues MIDNCRTGYFQFDARQDGLYFIVFPPKDGNRPVSIDDVLYYIEKKKINCDTVKLGEAVKAGCNTETEVKVSEEIVHPYAE FVDYRISADCMRAEAVFYPPFVGADMLTMEEIVKDLQYLGIKHGIDNNSIEQMLSVREYGKAYNVAAGTAPRDGQDGYIE YKFNTELKPRPKINDDGTVDFHTLENINHVNKGDVVAVLHREDRGDDGIDLLGRRVLPKKVNHVVFRHGKNLVQSEDGKE LISQVSGHVVLEGDKIFVSNVLELVNVDNSTGDIDYDGDVVIKGNVVAGFTVKAAGNITVSGIVEGATVIAGGSITFNRG IQGMTKAVVKAGGSIVSKFIESAESVSAGGSIEADSILHSKVTSKETIKASGKNGLIIGGDVKAVYMIEAKAIGNTMGTN TTVGVGVNPAMKRRVDELKNSLDKLGNNKIQLDQLLSAIRKKQELEGSLDAEKHELQTKTMRNVIMLEQEITKQKKELEE LRKQIGEEKRACIKVYDAAYVGVKLVFGDQCMFLKKKYDYCQFVKEGADIKCVAI
Sequences:
>Translated_535_residues MIDNCRTGYFQFDARQDGLYFIVFPPKDGNRPVSIDDVLYYIEKKKINCDTVKLGEAVKAGCNTETEVKVSEEIVHPYAE FVDYRISADCMRAEAVFYPPFVGADMLTMEEIVKDLQYLGIKHGIDNNSIEQMLSVREYGKAYNVAAGTAPRDGQDGYIE YKFNTELKPRPKINDDGTVDFHTLENINHVNKGDVVAVLHREDRGDDGIDLLGRRVLPKKVNHVVFRHGKNLVQSEDGKE LISQVSGHVVLEGDKIFVSNVLELVNVDNSTGDIDYDGDVVIKGNVVAGFTVKAAGNITVSGIVEGATVIAGGSITFNRG IQGMTKAVVKAGGSIVSKFIESAESVSAGGSIEADSILHSKVTSKETIKASGKNGLIIGGDVKAVYMIEAKAIGNTMGTN TTVGVGVNPAMKRRVDELKNSLDKLGNNKIQLDQLLSAIRKKQELEGSLDAEKHELQTKTMRNVIMLEQEITKQKKELEE LRKQIGEEKRACIKVYDAAYVGVKLVFGDQCMFLKKKYDYCQFVKEGADIKCVAI >Mature_535_residues MIDNCRTGYFQFDARQDGLYFIVFPPKDGNRPVSIDDVLYYIEKKKINCDTVKLGEAVKAGCNTETEVKVSEEIVHPYAE FVDYRISADCMRAEAVFYPPFVGADMLTMEEIVKDLQYLGIKHGIDNNSIEQMLSVREYGKAYNVAAGTAPRDGQDGYIE YKFNTELKPRPKINDDGTVDFHTLENINHVNKGDVVAVLHREDRGDDGIDLLGRRVLPKKVNHVVFRHGKNLVQSEDGKE LISQVSGHVVLEGDKIFVSNVLELVNVDNSTGDIDYDGDVVIKGNVVAGFTVKAAGNITVSGIVEGATVIAGGSITFNRG IQGMTKAVVKAGGSIVSKFIESAESVSAGGSIEADSILHSKVTSKETIKASGKNGLIIGGDVKAVYMIEAKAIGNTMGTN TTVGVGVNPAMKRRVDELKNSLDKLGNNKIQLDQLLSAIRKKQELEGSLDAEKHELQTKTMRNVIMLEQEITKQKKELEE LRKQIGEEKRACIKVYDAAYVGVKLVFGDQCMFLKKKYDYCQFVKEGADIKCVAI
Specific function: Unknown
COG id: COG1315
COG function: function code L; Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58808; Mature: 58808
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDNCRTGYFQFDARQDGLYFIVFPPKDGNRPVSIDDVLYYIEKKKINCDTVKLGEAVKA CCCCCCCCCEEEECCCCCEEEEEECCCCCCCCEEHHHHHHHHHHCCCCCCCEECCHHHHC GCNTETEVKVSEEIVHPYAEFVDYRISADCMRAEAVFYPPFVGADMLTMEEIVKDLQYLG CCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHH IKHGIDNNSIEQMLSVREYGKAYNVAAGTAPRDGQDGYIEYKFNTELKPRPKINDDGTVD HHCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEE FHTLENINHVNKGDVVAVLHREDRGDDGIDLLGRRVLPKKVNHVVFRHGKNLVQSEDGKE EEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHCCCHHHCCCCHHH LISQVSGHVVLEGDKIFVSNVLELVNVDNSTGDIDYDGDVVIKGNVVAGFTVKAAGNITV HHHHHCCCEEEECCEEHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEEEEEEECCCEEE SGIVEGATVIAGGSITFNRGIQGMTKAVVKAGGSIVSKFIESAESVSAGGSIEADSILHS EEEECCEEEEECCCEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH KVTSKETIKASGKNGLIIGGDVKAVYMIEAKAIGNTMGTNTTVGVGVNPAMKRRVDELKN HHCCCHHHEECCCCCEEECCCCEEEEEEEEEHHCCCCCCCCEEECCCCHHHHHHHHHHHH SLDKLGNNKIQLDQLLSAIRKKQELEGSLDAEKHELQTKTMRNVIMLEQEITKQKKELEE HHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRKQIGEEKRACIKVYDAAYVGVKLVFGDQCMFLKKKYDYCQFVKEGADIKCVAI HHHHHCHHHHHHHHHEEHHEEEEEEEECCCEEEHHHHHHHHHHHHCCCCEEEEEC >Mature Secondary Structure MIDNCRTGYFQFDARQDGLYFIVFPPKDGNRPVSIDDVLYYIEKKKINCDTVKLGEAVKA CCCCCCCCCEEEECCCCCEEEEEECCCCCCCCEEHHHHHHHHHHCCCCCCCEECCHHHHC GCNTETEVKVSEEIVHPYAEFVDYRISADCMRAEAVFYPPFVGADMLTMEEIVKDLQYLG CCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHH IKHGIDNNSIEQMLSVREYGKAYNVAAGTAPRDGQDGYIEYKFNTELKPRPKINDDGTVD HHCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEE FHTLENINHVNKGDVVAVLHREDRGDDGIDLLGRRVLPKKVNHVVFRHGKNLVQSEDGKE EEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHCCCHHHCCCCHHH LISQVSGHVVLEGDKIFVSNVLELVNVDNSTGDIDYDGDVVIKGNVVAGFTVKAAGNITV HHHHHCCCEEEECCEEHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEEEEEEECCCEEE SGIVEGATVIAGGSITFNRGIQGMTKAVVKAGGSIVSKFIESAESVSAGGSIEADSILHS EEEECCEEEEECCCEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH KVTSKETIKASGKNGLIIGGDVKAVYMIEAKAIGNTMGTNTTVGVGVNPAMKRRVDELKN HHCCCHHHEECCCCCEEECCCCEEEEEEEEEHHCCCCCCCCEEECCCCHHHHHHHHHHHH SLDKLGNNKIQLDQLLSAIRKKQELEGSLDAEKHELQTKTMRNVIMLEQEITKQKKELEE HHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRKQIGEEKRACIKVYDAAYVGVKLVFGDQCMFLKKKYDYCQFVKEGADIKCVAI HHHHHCHHHHHHHHHEEHHEEEEEEEECCCEEEHHHHHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA