| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is serC [H]
Identifier: 238916702
GI number: 238916702
Start: 775316
End: 776416
Strand: Direct
Name: serC [H]
Synonym: EUBELI_00764
Alternate gene names: 238916702
Gene position: 775316-776416 (Clockwise)
Preceding gene: 238916701
Following gene: 238916703
Centisome position: 36.16
GC content: 40.05
Gene sequence:
>1101_bases GTGAGTAGAGTTTATAACTTTAGCGCTGGTCCAGCTGTTTTACCAGAGGAAGTACTCAAAGAAGCAGCAGATGAAATGTT AGATTACCAGGGAAGCGGTCAGTCGGTAATGGAAATGAGCCACAGATCCAAGGTTTATGACAACATCATCAAAGAGGCAG AGAAGGATTTAAGAGACCTTCTTAACATCCCAGATAACTATAAGGTGTTATTTTTACAGGGTGGTGCATCGCAGTTCTTC GCTGAAGTGCCTATGAACCTTATGAAGAATAAGAAAGCAGGTTATATCCTTACAGGACAGTGGGCTAAGAAAGCATTTGC AGAAGCTAAGATATATGGAGAGGCTGTTGAGCTTGCTTCATCAGCAGACAAGACATTTTCATATATTCCAGACTGCTCAG ATCTTGATATTCCAGAGGATCTTGACTATGTATATATCTGTGAGAACAACACAATTTACGGAACAAAGTATAAGACATTA CCTAACACTAAGGGTCATATTCTTGTATCAGATGTTTCATCATGCTTCTTATCAGAACCTATGGATGTAACTAAGTACGG CGTTGTATACGGCGGTGTTCAGAAGAACATCGGACCAGCAGGCGTTGTAATTGCTATTATCAGAGAAGATCTTATAACAG ATGACGTTCTTCCAGGAACTCCTACAATGCTTAAGTGGAAGACACAGGCAGATGCAGATTCTCTTTATAATACACCACCA TGCTACAATATCTATATCTGTGGCAAGGTGTTCAAGTGGATTAAGAAGATGGGTGGACTTTCAGCAATGAAGGAACACAA TGAGAAGAAGGCTAAGATTCTTTATGATTTCCTTGATGAGAGCAAGTTATTCATGGGAACAGTTGTTAAGGAAGACCGTT CACTTATGAATGTACCTTTTGTATGCAACATTGAAGATAAAGAAGCTAAGGATGCTATGGAAGCTAAGTTCATTAAGGAA GCTGCAGCTGCAGGATTTGTTAACCTTAAGGGACACAGAACAGTTGGCGGTATGAGAGCATCTATCTACAATGCTATGCC AATCGAAGGTGTAGAGAAGCTTGTTGAATTCATGAAGAAGTTCGAGAAGGAGAATGCATAA
Upstream 100 bases:
>100_bases AGAGAAGACCTTAATAACAAGAAATAATTCATATATTGACTTTAATGTGATAAAGGACTAAAATAGTTCTTAATATTTTA TATTTTAGGAGGAAGAAAAG
Downstream 100 bases:
>100_bases TGATTAATGTTAATTGTCTTAATAATATAGCAGCCTGCGGATTAAAGCTTTTTTCTGATGAGTATAATACAGAAAGCTCA TTTGAAGACGCACAGGCTGT
Product: phosphoserine aminotransferase
Products: NA
Alternate protein names: Phosphohydroxythreonine aminotransferase; PSAT [H]
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MSRVYNFSAGPAVLPEEVLKEAADEMLDYQGSGQSVMEMSHRSKVYDNIIKEAEKDLRDLLNIPDNYKVLFLQGGASQFF AEVPMNLMKNKKAGYILTGQWAKKAFAEAKIYGEAVELASSADKTFSYIPDCSDLDIPEDLDYVYICENNTIYGTKYKTL PNTKGHILVSDVSSCFLSEPMDVTKYGVVYGGVQKNIGPAGVVIAIIREDLITDDVLPGTPTMLKWKTQADADSLYNTPP CYNIYICGKVFKWIKKMGGLSAMKEHNEKKAKILYDFLDESKLFMGTVVKEDRSLMNVPFVCNIEDKEAKDAMEAKFIKE AAAAGFVNLKGHRTVGGMRASIYNAMPIEGVEKLVEFMKKFEKENA
Sequences:
>Translated_366_residues MSRVYNFSAGPAVLPEEVLKEAADEMLDYQGSGQSVMEMSHRSKVYDNIIKEAEKDLRDLLNIPDNYKVLFLQGGASQFF AEVPMNLMKNKKAGYILTGQWAKKAFAEAKIYGEAVELASSADKTFSYIPDCSDLDIPEDLDYVYICENNTIYGTKYKTL PNTKGHILVSDVSSCFLSEPMDVTKYGVVYGGVQKNIGPAGVVIAIIREDLITDDVLPGTPTMLKWKTQADADSLYNTPP CYNIYICGKVFKWIKKMGGLSAMKEHNEKKAKILYDFLDESKLFMGTVVKEDRSLMNVPFVCNIEDKEAKDAMEAKFIKE AAAAGFVNLKGHRTVGGMRASIYNAMPIEGVEKLVEFMKKFEKENA >Mature_365_residues SRVYNFSAGPAVLPEEVLKEAADEMLDYQGSGQSVMEMSHRSKVYDNIIKEAEKDLRDLLNIPDNYKVLFLQGGASQFFA EVPMNLMKNKKAGYILTGQWAKKAFAEAKIYGEAVELASSADKTFSYIPDCSDLDIPEDLDYVYICENNTIYGTKYKTLP NTKGHILVSDVSSCFLSEPMDVTKYGVVYGGVQKNIGPAGVVIAIIREDLITDDVLPGTPTMLKWKTQADADSLYNTPPC YNIYICGKVFKWIKKMGGLSAMKEHNEKKAKILYDFLDESKLFMGTVVKEDRSLMNVPFVCNIEDKEAKDAMEAKFIKEA AAAGFVNLKGHRTVGGMRASIYNAMPIEGVEKLVEFMKKFEKENA
Specific function: Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine [H]
COG id: COG1932
COG function: function code HE; Phosphoserine aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily [H]
Homologues:
Organism=Homo sapiens, GI17402893, Length=363, Percent_Identity=45.4545454545455, Blast_Score=332, Evalue=4e-91, Organism=Homo sapiens, GI10863955, Length=320, Percent_Identity=43.4375, Blast_Score=270, Evalue=1e-72, Organism=Escherichia coli, GI1787136, Length=370, Percent_Identity=44.5945945945946, Blast_Score=320, Evalue=1e-88, Organism=Caenorhabditis elegans, GI17506897, Length=364, Percent_Identity=42.3076923076923, Blast_Score=283, Evalue=1e-76, Organism=Saccharomyces cerevisiae, GI6324758, Length=392, Percent_Identity=39.2857142857143, Blast_Score=261, Evalue=2e-70, Organism=Drosophila melanogaster, GI21356589, Length=365, Percent_Identity=44.3835616438356, Blast_Score=306, Evalue=1e-83,
Paralogues:
None
Copy number: 2500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR022278 - InterPro: IPR003248 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.52 [H]
Molecular weight: Translated: 40858; Mature: 40727
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVYNFSAGPAVLPEEVLKEAADEMLDYQGSGQSVMEMSHRSKVYDNIIKEAEKDLRDL CCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LNIPDNYKVLFLQGGASQFFAEVPMNLMKNKKAGYILTGQWAKKAFAEAKIYGEAVELAS HCCCCCCEEEEEECCHHHHHHHHCHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH SADKTFSYIPDCSDLDIPEDLDYVYICENNTIYGTKYKTLPNTKGHILVSDVSSCFLSEP CCCCHHHCCCCCCCCCCCCCCCEEEEECCCEEECCEECCCCCCCCCEEEEHHHHHHHCCC MDVTKYGVVYGGVQKNIGPAGVVIAIIREDLITDDVLPGTPTMLKWKTQADADSLYNTPP CCHHHHHEEECCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHCCCCC CYNIYICGKVFKWIKKMGGLSAMKEHNEKKAKILYDFLDESKLFMGTVVKEDRSLMNVPF CEEEEEHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCCE VCNIEDKEAKDAMEAKFIKEAAAAGFVNLKGHRTVGGMRASIYNAMPIEGVEKLVEFMKK EEECCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHH FEKENA HHHCCC >Mature Secondary Structure SRVYNFSAGPAVLPEEVLKEAADEMLDYQGSGQSVMEMSHRSKVYDNIIKEAEKDLRDL CCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LNIPDNYKVLFLQGGASQFFAEVPMNLMKNKKAGYILTGQWAKKAFAEAKIYGEAVELAS HCCCCCCEEEEEECCHHHHHHHHCHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH SADKTFSYIPDCSDLDIPEDLDYVYICENNTIYGTKYKTLPNTKGHILVSDVSSCFLSEP CCCCHHHCCCCCCCCCCCCCCCEEEEECCCEEECCEECCCCCCCCCEEEEHHHHHHHCCC MDVTKYGVVYGGVQKNIGPAGVVIAIIREDLITDDVLPGTPTMLKWKTQADADSLYNTPP CCHHHHHEEECCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHCCCCC CYNIYICGKVFKWIKKMGGLSAMKEHNEKKAKILYDFLDESKLFMGTVVKEDRSLMNVPF CEEEEEHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCCE VCNIEDKEAKDAMEAKFIKEAAAAGFVNLKGHRTVGGMRASIYNAMPIEGVEKLVEFMKK EEECCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHH FEKENA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12700255 [H]