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The map label for this gene is ykpA [H]

Identifier: 238916648

GI number: 238916648

Start: 708829

End: 710466

Strand: Direct

Name: ykpA [H]

Synonym: EUBELI_00710

Alternate gene names: 238916648

Gene position: 708829-710466 (Clockwise)

Preceding gene: 238916647

Following gene: 238916649

Centisome position: 33.06

GC content: 37.85

Gene sequence:

>1638_bases
ATGATTAGTGCTAACAATGTAACACTTAGAATCGGTAAGAAGGCTCTTTTTGAAGATGTTAACATTAAGTTCACAGAGGG
TAACTGTTATGGACTTATTGGTGCGAATGGTGCCGGAAAGTCAACATTTTTAAAAATTCTTACAGGACAGATAGAACCTA
GCAAGGGTGATGTTTCAATCACACCAGGTCAGAGATTATCTTTCTTAGAGCAGGATCACTTCAAGTATGATGAATATAAT
GTTCTTGATACAGTAATCATGGGTAATGACAGACTTTACCAGATTATGAAAGAGAAAGAAGCTATATATGCCAAGGAAGA
TTTTACAGAGGAAGATGGTAACAAGGCAAGTGAGCTTGAGGCTGAGTTTGCAGATATGAATGGCTGGGAGGCTGAATCAG
ATGCTGCACAGCTTCTTAACGGACTTGGAATCGGAACAGATCTTCATTATAAGACAATGGCTGAGCTTAACGGTAGTGAG
AAGGTGAAAGTTCTTCTTGCAAAGGCTTTATTTGGTAATCCTGATATTCTGCTTTTAGATGAGCCTACTAACCACCTTGA
TCTTGATGCGATTGCATGGTTAGAAGAATTCCTTATTAATTTTGAGAATACTGTTATTGTTGTATCGCATGACAGATATT
TCCTTAATAAAGTATGTACACAGATTGCAGATATTGATTATGCGAAGATTCAGCTCTATGCAGGTAATTATGATTTCTGG
TATGAGTCAAGCCAGCTTATTATCAAGCAGATGAAGGAAGCTAATAAGAAGAAGGAAGAAAAGATTAAGGAATTACAGGA
CTTTATCCAGAGATTCTCTGCCAATGCTTCTAAGTCTAAGCAGGCTACTTCAAGAAAGAGAGCTCTTGAGAAGATTGAAT
TAGACGAGATTAAGCCATCAAGCAGAAAGTATCCATATATTGATTTCAGACCAGCAAGAGAGATTGGTAATGAAGTACTT
ACAGTAGAAGGAATTTCTAAGACTATTGATGGTGTTAAGGTACTTGATAATGTATCATTTATTGTAAATCATGATGATAA
GATAGCATTTGTTGGTTCTAATGAGCTTGCGACAACTACACTTTTCAATATTATTACAGGCAACATGGAGCCTGATGAGG
GAAGCTACAAATGGGGTGTTACAACTTCACAGGCTTATTTCCCTAAGGACAGTGCTGCAGAGTTTAACAGAGAAGATACT
ATTGTTGAATGGCTTACACAGTATTCACCAGATCCGGATCCTACTTATGTAAGAGGATTCCTTGGAAGAATGCTTTTTGC
CGGAGATGACGGTGTTAAGAAGGTTAAGGTATTATCAGGTGGAGAGAAGGTAAGATGTCTTATATCCAAGATGATGATAT
GTGGAGCAAATGTATTAGTATTTGATGATCCTACTAACCACCTTGATATGGAGTCAATCACAGCTCTTAACAACGGACTT
ATTAAGTTCCCTGGAGTTACATTATTTACATCACACGATCACCAGTTCATCCAGACAACTGCTAACCGTATTATGGAAAT
TGTTCCAAGCGGACAGCTTATTGATAAGATAACAACATACGATGAGTATCTTGCAAGCGATGAGATGGCAAGAAAGCGTC
AGGGCTTTGCAGAAGCAGCTTCTGATGATGAAGATTAA

Upstream 100 bases:

>100_bases
TGCTTGCATTTATGTTCCAGAATCTCTATAATCAACTTTGTATGATTATTTTTATAATAGATTATTATCTGTTATGCGTA
TTTTTTGGAGGAGATTATTA

Downstream 100 bases:

>100_bases
TAAACAGCAATGGACAGCCGCACTTATGTGCGGCTGTCTGTGCGTATGAGCTGCGAGCAGAGTCAAGATGAGAATAAGAA
TGATTGACAAATACTACACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MISANNVTLRIGKKALFEDVNIKFTEGNCYGLIGANGAGKSTFLKILTGQIEPSKGDVSITPGQRLSFLEQDHFKYDEYN
VLDTVIMGNDRLYQIMKEKEAIYAKEDFTEEDGNKASELEAEFADMNGWEAESDAAQLLNGLGIGTDLHYKTMAELNGSE
KVKVLLAKALFGNPDILLLDEPTNHLDLDAIAWLEEFLINFENTVIVVSHDRYFLNKVCTQIADIDYAKIQLYAGNYDFW
YESSQLIIKQMKEANKKKEEKIKELQDFIQRFSANASKSKQATSRKRALEKIELDEIKPSSRKYPYIDFRPAREIGNEVL
TVEGISKTIDGVKVLDNVSFIVNHDDKIAFVGSNELATTTLFNIITGNMEPDEGSYKWGVTTSQAYFPKDSAAEFNREDT
IVEWLTQYSPDPDPTYVRGFLGRMLFAGDDGVKKVKVLSGGEKVRCLISKMMICGANVLVFDDPTNHLDMESITALNNGL
IKFPGVTLFTSHDHQFIQTTANRIMEIVPSGQLIDKITTYDEYLASDEMARKRQGFAEAASDDED

Sequences:

>Translated_545_residues
MISANNVTLRIGKKALFEDVNIKFTEGNCYGLIGANGAGKSTFLKILTGQIEPSKGDVSITPGQRLSFLEQDHFKYDEYN
VLDTVIMGNDRLYQIMKEKEAIYAKEDFTEEDGNKASELEAEFADMNGWEAESDAAQLLNGLGIGTDLHYKTMAELNGSE
KVKVLLAKALFGNPDILLLDEPTNHLDLDAIAWLEEFLINFENTVIVVSHDRYFLNKVCTQIADIDYAKIQLYAGNYDFW
YESSQLIIKQMKEANKKKEEKIKELQDFIQRFSANASKSKQATSRKRALEKIELDEIKPSSRKYPYIDFRPAREIGNEVL
TVEGISKTIDGVKVLDNVSFIVNHDDKIAFVGSNELATTTLFNIITGNMEPDEGSYKWGVTTSQAYFPKDSAAEFNREDT
IVEWLTQYSPDPDPTYVRGFLGRMLFAGDDGVKKVKVLSGGEKVRCLISKMMICGANVLVFDDPTNHLDMESITALNNGL
IKFPGVTLFTSHDHQFIQTTANRIMEIVPSGQLIDKITTYDEYLASDEMARKRQGFAEAASDDED
>Mature_545_residues
MISANNVTLRIGKKALFEDVNIKFTEGNCYGLIGANGAGKSTFLKILTGQIEPSKGDVSITPGQRLSFLEQDHFKYDEYN
VLDTVIMGNDRLYQIMKEKEAIYAKEDFTEEDGNKASELEAEFADMNGWEAESDAAQLLNGLGIGTDLHYKTMAELNGSE
KVKVLLAKALFGNPDILLLDEPTNHLDLDAIAWLEEFLINFENTVIVVSHDRYFLNKVCTQIADIDYAKIQLYAGNYDFW
YESSQLIIKQMKEANKKKEEKIKELQDFIQRFSANASKSKQATSRKRALEKIELDEIKPSSRKYPYIDFRPAREIGNEVL
TVEGISKTIDGVKVLDNVSFIVNHDDKIAFVGSNELATTTLFNIITGNMEPDEGSYKWGVTTSQAYFPKDSAAEFNREDT
IVEWLTQYSPDPDPTYVRGFLGRMLFAGDDGVKKVKVLSGGEKVRCLISKMMICGANVLVFDDPTNHLDMESITALNNGL
IKFPGVTLFTSHDHQFIQTTANRIMEIVPSGQLIDKITTYDEYLASDEMARKRQGFAEAASDDED

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=548, Percent_Identity=28.8321167883212, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI10947137, Length=534, Percent_Identity=30.8988764044944, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI27881506, Length=534, Percent_Identity=30.8988764044944, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI69354671, Length=511, Percent_Identity=28.1800391389432, Blast_Score=186, Evalue=7e-47,
Organism=Homo sapiens, GI10947135, Length=511, Percent_Identity=28.1800391389432, Blast_Score=185, Evalue=7e-47,
Organism=Homo sapiens, GI105990541, Length=203, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=9e-13,
Organism=Escherichia coli, GI1787041, Length=527, Percent_Identity=45.9203036053131, Blast_Score=510, Evalue=1e-145,
Organism=Escherichia coli, GI1789751, Length=503, Percent_Identity=30.4174950298211, Blast_Score=265, Evalue=7e-72,
Organism=Escherichia coli, GI2367384, Length=547, Percent_Identity=29.981718464351, Blast_Score=239, Evalue=5e-64,
Organism=Escherichia coli, GI1787182, Length=507, Percent_Identity=28.9940828402367, Blast_Score=216, Evalue=3e-57,
Organism=Escherichia coli, GI1786398, Length=238, Percent_Identity=26.0504201680672, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1789891, Length=226, Percent_Identity=23.0088495575221, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1790525, Length=233, Percent_Identity=27.8969957081545, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI48994943, Length=246, Percent_Identity=23.5772357723577, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=513, Percent_Identity=30.0194931773879, Blast_Score=235, Evalue=4e-62,
Organism=Caenorhabditis elegans, GI17555318, Length=508, Percent_Identity=26.9685039370079, Blast_Score=219, Evalue=4e-57,
Organism=Caenorhabditis elegans, GI17559834, Length=518, Percent_Identity=28.3783783783784, Blast_Score=215, Evalue=4e-56,
Organism=Saccharomyces cerevisiae, GI6320874, Length=526, Percent_Identity=31.9391634980989, Blast_Score=244, Evalue=3e-65,
Organism=Saccharomyces cerevisiae, GI6321121, Length=516, Percent_Identity=29.8449612403101, Blast_Score=225, Evalue=1e-59,
Organism=Saccharomyces cerevisiae, GI6324314, Length=371, Percent_Identity=25.8760107816712, Blast_Score=106, Evalue=8e-24,
Organism=Saccharomyces cerevisiae, GI6325030, Length=239, Percent_Identity=32.6359832635983, Blast_Score=104, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6323278, Length=368, Percent_Identity=25.5434782608696, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24666836, Length=511, Percent_Identity=30.3326810176125, Blast_Score=242, Evalue=4e-64,
Organism=Drosophila melanogaster, GI24641342, Length=537, Percent_Identity=28.1191806331471, Blast_Score=219, Evalue=3e-57,
Organism=Drosophila melanogaster, GI24642252, Length=497, Percent_Identity=28.9738430583501, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI18859989, Length=497, Percent_Identity=28.9738430583501, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI116007184, Length=244, Percent_Identity=24.5901639344262, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221500365, Length=244, Percent_Identity=24.5901639344262, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61243; Mature: 61243

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISANNVTLRIGKKALFEDVNIKFTEGNCYGLIGANGAGKSTFLKILTGQIEPSKGDVSI
CCCCCCEEEEECCHHHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
TPGQRLSFLEQDHFKYDEYNVLDTVIMGNDRLYQIMKEKEAIYAKEDFTEEDGNKASELE
CCCCHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHEEECCCCCCCCCCCHHHHH
AEFADMNGWEAESDAAQLLNGLGIGTDLHYKTMAELNGSEKVKVLLAKALFGNPDILLLD
HHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHEEHHHCCCCCEEEEE
EPTNHLDLDAIAWLEEFLINFENTVIVVSHDRYFLNKVCTQIADIDYAKIQLYAGNYDFW
CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCEE
YESSQLIIKQMKEANKKKEEKIKELQDFIQRFSANASKSKQATSRKRALEKIELDEIKPS
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
SRKYPYIDFRPAREIGNEVLTVEGISKTIDGVKVLDNVSFIVNHDDKIAFVGSNELATTT
CCCCCEEECCCHHHCCCEEEEEECHHHHHCCHHHHCCEEEEEECCCEEEEECCCCHHHHH
LFNIITGNMEPDEGSYKWGVTTSQAYFPKDSAAEFNREDTIVEWLTQYSPDPDPTYVRGF
HHHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCCHHHHHHH
LGRMLFAGDDGVKKVKVLSGGEKVRCLISKMMICGANVLVFDDPTNHLDMESITALNNGL
HHHEEECCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHCCCE
IKFPGVTLFTSHDHQFIQTTANRIMEIVPSGQLIDKITTYDEYLASDEMARKRQGFAEAA
EECCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCC
SDDED
CCCCC
>Mature Secondary Structure
MISANNVTLRIGKKALFEDVNIKFTEGNCYGLIGANGAGKSTFLKILTGQIEPSKGDVSI
CCCCCCEEEEECCHHHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
TPGQRLSFLEQDHFKYDEYNVLDTVIMGNDRLYQIMKEKEAIYAKEDFTEEDGNKASELE
CCCCHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHEEECCCCCCCCCCCHHHHH
AEFADMNGWEAESDAAQLLNGLGIGTDLHYKTMAELNGSEKVKVLLAKALFGNPDILLLD
HHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHEEHHHCCCCCEEEEE
EPTNHLDLDAIAWLEEFLINFENTVIVVSHDRYFLNKVCTQIADIDYAKIQLYAGNYDFW
CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCEE
YESSQLIIKQMKEANKKKEEKIKELQDFIQRFSANASKSKQATSRKRALEKIELDEIKPS
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
SRKYPYIDFRPAREIGNEVLTVEGISKTIDGVKVLDNVSFIVNHDDKIAFVGSNELATTT
CCCCCEEECCCHHHCCCEEEEEECHHHHHCCHHHHCCEEEEEECCCEEEEECCCCHHHHH
LFNIITGNMEPDEGSYKWGVTTSQAYFPKDSAAEFNREDTIVEWLTQYSPDPDPTYVRGF
HHHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCCHHHHHHH
LGRMLFAGDDGVKKVKVLSGGEKVRCLISKMMICGANVLVFDDPTNHLDMESITALNNGL
HHHEEECCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHCCCE
IKFPGVTLFTSHDHQFIQTTANRIMEIVPSGQLIDKITTYDEYLASDEMARKRQGFAEAA
EECCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCC
SDDED
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]