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The map label for this gene is mcpB [H]

Identifier: 238916637

GI number: 238916637

Start: 696357

End: 696995

Strand: Direct

Name: mcpB [H]

Synonym: EUBELI_00694

Alternate gene names: 238916637

Gene position: 696357-696995 (Clockwise)

Preceding gene: 238916636

Following gene: 238916638

Centisome position: 32.48

GC content: 36.15

Gene sequence:

>639_bases
ATGAGTAACGAAGCAATGGTGAATAATCTCACCAATATTCTTAATGGACTTGATGATTCACAGGAAAAGCTTGAAAAAGA
TGCATTTGATGTTATTAATTCGTCAGATACATCTCTTAATCTGGTTAAGGAAAGCATGTCAAGTGTAGAAGAGATCCTTG
GAATGATAGAATCAATGAATAAAGTTGTGGAGGAGTCTTCAGCTAAGATTAAAGAACTTGAAGCTTTGTCTAAGAAGATT
GAAGAATTTGCAGCTGTTATTAGTTCAATATCTAACAGAACCAATATACTTTCACTTAATGCATCAATAGAAGCCGCAAG
AGCCGGTGAACATGGCAGGGGATTTGCTGTTGTTGCCAGTGAGGTAAGAAATCTTGCTGCTCAGTCAGCTAAGTCGTCCA
AAGAGATAACAGACACAATTACTAAAGTACAGACCTCGGTTGATGAAACGGTCACAGCTATGAAGAATATTTATGATAAT
TCATCAAAGCAGAAGGAAAAAGCAGATGATGTTGGAAATGTCCTTAAGAAAGTAATAGATGCAGCATATACTGCTAATGA
GGTTGCAAGAAATATTGAAAATGAGATAGCTTATCAGAGAGAGATAACAGATGAAGCTAAGAATGCATTAAACGCATAG

Upstream 100 bases:

>100_bases
GAAAAACATAAAGAAGAATGATAAAATTGAAATAATTGGTGTTAATAATGTTCAGGAAGCAATTAAACTGATATAAAATA
CATAGGATGGGGGATTACTT

Downstream 100 bases:

>100_bases
GAATAATCAGGGAGGTCACATAAGACCTCCTTTATTTAATGGGTATAATGAAAAAGACAGTAAATAAGTGGCTTCGCAGG
CATGTCAGTCCCGCTTAAAA

Product: twitching motility protein PilJ

Products: NA

Alternate protein names: H3 [H]

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSNEAMVNNLTNILNGLDDSQEKLEKDAFDVINSSDTSLNLVKESMSSVEEILGMIESMNKVVEESSAKIKELEALSKKI
EEFAAVISSISNRTNILSLNASIEAARAGEHGRGFAVVASEVRNLAAQSAKSSKEITDTITKVQTSVDETVTAMKNIYDN
SSKQKEKADDVGNVLKKVIDAAYTANEVARNIENEIAYQREITDEAKNALNA

Sequences:

>Translated_212_residues
MSNEAMVNNLTNILNGLDDSQEKLEKDAFDVINSSDTSLNLVKESMSSVEEILGMIESMNKVVEESSAKIKELEALSKKI
EEFAAVISSISNRTNILSLNASIEAARAGEHGRGFAVVASEVRNLAAQSAKSSKEITDTITKVQTSVDETVTAMKNIYDN
SSKQKEKADDVGNVLKKVIDAAYTANEVARNIENEIAYQREITDEAKNALNA
>Mature_211_residues
SNEAMVNNLTNILNGLDDSQEKLEKDAFDVINSSDTSLNLVKESMSSVEEILGMIESMNKVVEESSAKIKELEALSKKIE
EFAAVISSISNRTNILSLNASIEAARAGEHGRGFAVVASEVRNLAAQSAKSSKEITDTITKVQTSVDETVTAMKNIYDNS
SKQKEKADDVGNVLKKVIDAAYTANEVARNIENEIAYQREITDEAKNALNA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=85, Percent_Identity=56.4705882352941, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1788195, Length=91, Percent_Identity=51.6483516483517, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI2367378, Length=88, Percent_Identity=50, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1788194, Length=71, Percent_Identity=57.7464788732394, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1789453, Length=87, Percent_Identity=43.6781609195402, Blast_Score=70, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 23035; Mature: 22904

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNEAMVNNLTNILNGLDDSQEKLEKDAFDVINSSDTSLNLVKESMSSVEEILGMIESMN
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KVVEESSAKIKELEALSKKIEEFAAVISSISNRTNILSLNASIEAARAGEHGRGFAVVAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCHHHHHHH
EVRNLAAQSAKSSKEITDTITKVQTSVDETVTAMKNIYDNSSKQKEKADDVGNVLKKVID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AAYTANEVARNIENEIAYQREITDEAKNALNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNEAMVNNLTNILNGLDDSQEKLEKDAFDVINSSDTSLNLVKESMSSVEEILGMIESMN
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KVVEESSAKIKELEALSKKIEEFAAVISSISNRTNILSLNASIEAARAGEHGRGFAVVAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCHHHHHHH
EVRNLAAQSAKSSKEITDTITKVQTSVDETVTAMKNIYDNSSKQKEKADDVGNVLKKVID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AAYTANEVARNIENEIAYQREITDEAKNALNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377 [H]