Definition Eubacterium eligens ATCC 27750 chromosome, complete genome.
Accession NC_012778
Length 2,144,190

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The map label for this gene is yybJ [H]

Identifier: 238916598

GI number: 238916598

Start: 655867

End: 656505

Strand: Direct

Name: yybJ [H]

Synonym: EUBELI_00655

Alternate gene names: 238916598

Gene position: 655867-656505 (Clockwise)

Preceding gene: 238916597

Following gene: 238916599

Centisome position: 30.59

GC content: 37.4

Gene sequence:

>639_bases
ATGAGAGTTGTTTTAAAAAATGTATGCAAAGACATAAAAGGTGCAAGAGTACTTGATAATGTTAATCTTGAACTTGAAAG
CGGCAGAGTGTATGGATTTAAAGGTAAGAATGGCTCAGGTAAAACCATGCTTATGCGGGCTATAAGTGGGCTTATAAAGG
TGAAAGGTGAAATTGAGATTGATGGGGAAATACTTGGAAAAGACTTTTCATTTCCACCAAGTATAGGGATTCTTATAGAA
AATCCATCGTTTGTTCAGGAATATACAGGGTTAAAGAATCTAGAAATGCTGGCATGCATTAAAAATAATACAGGAATTGA
GGATATAAGGCATGTCATGGAACAGGTAGGACTTGATCCTGACGATAAAAGAACATACAGGAAATATTCACTGGGAATGA
AACAGAAACTAGGAATTGCTGCAGCCTATATGGAGAATCCGGATATTATTATACTTGATGAGCCAATAAATGCGCTTGAT
GAAGCAGGAGCAAAGCAGGTTCATGAGATACTTGAGGAGCAGAAAAAGAGAGGAGCACTTATAATAATTGCCTGTCATGA
TAAGGAAGAACTTGAAATGCTGTCTGATGAGATAATTGAGATTTACGAGGGCAGGATTGTTGCCCAAGAGAAAGTGTGA

Upstream 100 bases:

>100_bases
TATGATGCTGGCTGATGCTGTAATAATATTGCTATGTGCAATACTGGGATATGTATATATAAGAAGGATAGATATACTGA
ATGCTAAGGAGGTATAGTGC

Downstream 100 bases:

>100_bases
ATGAAATAATAATGGATAATAGAATATATAATTATATTGTGCATAATTCTGATATAAATAATAAAGATGAAAATAAAGTT
ATTGAATTTGGAATAGAAAT

Product: antibiotic transport system ATP-binding protein

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MRVVLKNVCKDIKGARVLDNVNLELESGRVYGFKGKNGSGKTMLMRAISGLIKVKGEIEIDGEILGKDFSFPPSIGILIE
NPSFVQEYTGLKNLEMLACIKNNTGIEDIRHVMEQVGLDPDDKRTYRKYSLGMKQKLGIAAAYMENPDIIILDEPINALD
EAGAKQVHEILEEQKKRGALIIIACHDKEELEMLSDEIIEIYEGRIVAQEKV

Sequences:

>Translated_212_residues
MRVVLKNVCKDIKGARVLDNVNLELESGRVYGFKGKNGSGKTMLMRAISGLIKVKGEIEIDGEILGKDFSFPPSIGILIE
NPSFVQEYTGLKNLEMLACIKNNTGIEDIRHVMEQVGLDPDDKRTYRKYSLGMKQKLGIAAAYMENPDIIILDEPINALD
EAGAKQVHEILEEQKKRGALIIIACHDKEELEMLSDEIIEIYEGRIVAQEKV
>Mature_212_residues
MRVVLKNVCKDIKGARVLDNVNLELESGRVYGFKGKNGSGKTMLMRAISGLIKVKGEIEIDGEILGKDFSFPPSIGILIE
NPSFVQEYTGLKNLEMLACIKNNTGIEDIRHVMEQVGLDPDDKRTYRKYSLGMKQKLGIAAAYMENPDIIILDEPINALD
EAGAKQVHEILEEQKKRGALIIIACHDKEELEMLSDEIIEIYEGRIVAQEKV

Specific function: Part Of A Binding-Protein-Dependent Transport System For Taurine. Probably Responsible For Energy Coupling To The Transport System. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI11967969, Length=214, Percent_Identity=26.6355140186916, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI150417984, Length=213, Percent_Identity=26.7605633802817, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI27881501, Length=210, Percent_Identity=27.1428571428571, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI30795238, Length=210, Percent_Identity=27.1428571428571, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI105990541, Length=211, Percent_Identity=24.6445497630332, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI116734710, Length=198, Percent_Identity=26.7676767676768, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI31657092, Length=212, Percent_Identity=26.4150943396226, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI21536376, Length=219, Percent_Identity=28.310502283105, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI153792144, Length=213, Percent_Identity=27.2300469483568, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI27477115, Length=194, Percent_Identity=25.7731958762887, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI45446740, Length=218, Percent_Identity=27.5229357798165, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI47078218, Length=218, Percent_Identity=27.5229357798165, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI6005701, Length=194, Percent_Identity=26.2886597938144, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1786563, Length=206, Percent_Identity=28.6407766990291, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1788225, Length=221, Percent_Identity=29.4117647058824, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788761, Length=215, Percent_Identity=25.5813953488372, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787370, Length=213, Percent_Identity=28.6384976525822, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786398, Length=222, Percent_Identity=27.4774774774775, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI87081782, Length=194, Percent_Identity=27.8350515463918, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1788506, Length=212, Percent_Identity=27.8301886792453, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1788472, Length=224, Percent_Identity=25, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1788210, Length=214, Percent_Identity=25.2336448598131, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1787105, Length=212, Percent_Identity=27.3584905660377, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI87081709, Length=220, Percent_Identity=26.8181818181818, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787712, Length=214, Percent_Identity=27.5700934579439, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87081834, Length=218, Percent_Identity=25.6880733944954, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1789991, Length=214, Percent_Identity=28.5046728971963, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI48995001, Length=210, Percent_Identity=23.3333333333333, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1790467, Length=211, Percent_Identity=27.9620853080569, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1787500, Length=215, Percent_Identity=30.2325581395349, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI48994943, Length=197, Percent_Identity=26.3959390862944, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1787547, Length=203, Percent_Identity=30.0492610837438, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1786319, Length=211, Percent_Identity=29.3838862559242, Blast_Score=71, Evalue=4e-14,
Organism=Escherichia coli, GI87081791, Length=208, Percent_Identity=24.0384615384615, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787029, Length=217, Percent_Identity=26.2672811059908, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1789962, Length=206, Percent_Identity=29.126213592233, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789032, Length=209, Percent_Identity=26.7942583732057, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789873, Length=213, Percent_Identity=25.3521126760563, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI48994883, Length=227, Percent_Identity=25.5506607929515, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1790525, Length=221, Percent_Identity=26.2443438914027, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1788450, Length=217, Percent_Identity=25.3456221198157, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1786345, Length=221, Percent_Identity=25.3393665158371, Blast_Score=67, Evalue=6e-13,
Organism=Escherichia coli, GI1789593, Length=212, Percent_Identity=24.5283018867925, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790162, Length=220, Percent_Identity=25.4545454545455, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786872, Length=215, Percent_Identity=26.9767441860465, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790190, Length=228, Percent_Identity=25.8771929824561, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789672, Length=216, Percent_Identity=25.9259259259259, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI145693107, Length=223, Percent_Identity=25.5605381165919, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1789963, Length=213, Percent_Identity=25.8215962441315, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787758, Length=210, Percent_Identity=24.7619047619048, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787759, Length=214, Percent_Identity=25.2336448598131, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1787089, Length=209, Percent_Identity=23.9234449760766, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1787792, Length=211, Percent_Identity=23.696682464455, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1790544, Length=225, Percent_Identity=23.5555555555556, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1786803, Length=204, Percent_Identity=26.9607843137255, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1788165, Length=199, Percent_Identity=25.1256281407035, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1788897, Length=210, Percent_Identity=25.7142857142857, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786975, Length=194, Percent_Identity=26.8041237113402, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1786703, Length=201, Percent_Identity=22.8855721393035, Blast_Score=61, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=209, Percent_Identity=24.4019138755981, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71983523, Length=217, Percent_Identity=26.2672811059908, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI71983516, Length=217, Percent_Identity=26.2672811059908, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI71983510, Length=217, Percent_Identity=26.2672811059908, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI115533608, Length=193, Percent_Identity=27.979274611399, Blast_Score=72, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17565586, Length=211, Percent_Identity=23.696682464455, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI133930907, Length=209, Percent_Identity=25.3588516746411, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17565938, Length=186, Percent_Identity=26.3440860215054, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6325030, Length=208, Percent_Identity=32.2115384615385, Blast_Score=72, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6324904, Length=221, Percent_Identity=26.6968325791855, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221500365, Length=214, Percent_Identity=27.5700934579439, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI116007184, Length=214, Percent_Identity=27.5700934579439, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI28574150, Length=214, Percent_Identity=27.5700934579439, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI116007328, Length=214, Percent_Identity=27.5700934579439, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI221512771, Length=216, Percent_Identity=25.9259259259259, Blast_Score=70, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24666836, Length=216, Percent_Identity=26.8518518518519, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24666092, Length=209, Percent_Identity=21.5311004784689, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24582014, Length=181, Percent_Identity=28.1767955801105, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24582012, Length=181, Percent_Identity=28.1767955801105, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24662800, Length=211, Percent_Identity=27.0142180094787, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24643674, Length=209, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI28573573, Length=204, Percent_Identity=27.9411764705882, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI28573571, Length=204, Percent_Identity=27.9411764705882, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 23703; Mature: 23703

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MRVVLKNVCKDIKGARVLDNVNLELESGRVYGFKGKNGSGKTMLMRAISGLIKVKGEIEI
CCCHHHHHHHHCCCCEEEECCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHEECCEEEE
DGEILGKDFSFPPSIGILIENPSFVQEYTGLKNLEMLACIKNNTGIEDIRHVMEQVGLDP
CCEEECCCCCCCCCEEEEECCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCC
DDKRTYRKYSLGMKQKLGIAAAYMENPDIIILDEPINALDEAGAKQVHEILEEQKKRGAL
CCHHHHHHHHCCHHHHHCEEEEEECCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHCCCE
IIIACHDKEELEMLSDEIIEIYEGRIVAQEKV
EEEEECCHHHHHHHHHHHHHHHCCEEEEECCC
>Mature Secondary Structure
MRVVLKNVCKDIKGARVLDNVNLELESGRVYGFKGKNGSGKTMLMRAISGLIKVKGEIEI
CCCHHHHHHHHCCCCEEEECCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHEECCEEEE
DGEILGKDFSFPPSIGILIENPSFVQEYTGLKNLEMLACIKNNTGIEDIRHVMEQVGLDP
CCEEECCCCCCCCCEEEEECCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCC
DDKRTYRKYSLGMKQKLGIAAAYMENPDIIILDEPINALDEAGAKQVHEILEEQKKRGAL
CCHHHHHHHHCCHHHHHCEEEEEECCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHCCCE
IIIACHDKEELEMLSDEIIEIYEGRIVAQEKV
EEEEECCHHHHHHHHHHHHHHHCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1938973; 7584024; 9384377 [H]