| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is 238916400
Identifier: 238916400
GI number: 238916400
Start: 465698
End: 466294
Strand: Direct
Name: 238916400
Synonym: EUBELI_00454
Alternate gene names: NA
Gene position: 465698-466294 (Clockwise)
Preceding gene: 238916399
Following gene: 238916401
Centisome position: 21.72
GC content: 39.53
Gene sequence:
>597_bases ATGGATAAAGACAGACTTGACAGACAGATAGAGTTTATAAGAGAGATTGATAAGGAAAAGAGCATTGGCAGACAGACGTA TCTGGCGGATGCGTCAAGAAAGGAAGATGACGCTGAGCATGCATGGCATATGGCAATTATGACTGTGCTGTTGTCTGAAT ATGCCAACGAAAAGATTGATGTGCTCCGCACAATGACAATGCTTCTTATACATGACCTTGTAGAGATAGATGCAGGCGAT ACATATGCTTACGATGAGAATGCTAAGAAGACACAGCGTGAAAGAGAGTTAAAATGTGCTGACAGAATATTCAGTATTCT TCCAGAAGACCAGGGGAAATATATGCGTGAATTGTGGGAGGAATTCGAGGCACAGGAAACACCAGAAGCAAAGTTTGCAA GAACTATGGATAACTTCCAGCCTGTAATTTTAAATGATGCTTCAAAAGGAAAAAGCTGGGCAGAAAAGGGTGTGCATCTT AGCCAGATATTAAAAAGAAATGCACGAACAGGAGAAGGCTCAGAAGAACTCTGGAAATATTCGTATGAAAAATTTATAAT GCCTAATGTGAAAAAAGGGAATATTAAAGAGGATTAA
Upstream 100 bases:
>100_bases CACCAGCTATTATAGTTGTTGGCGAGGTTGCGTCACTGGAATTGACGGATTAGCAGAAACTTAAGATGCGCTGAAAAGCA GCGCAGGAATAGAGGTTAAC
Downstream 100 bases:
>100_bases AATAGTAGAAATTCGAGTTAAGGGGGTAAAATTTACAAAAAAGTAAAAAAATACCCCCTTAACTTAAAAAAACATTTCTT TTGCTATAATAAAAATATAA
Product: hydrolases of HD superfamily
Products: NA
Alternate protein names: HD Domain-Containing Protein; Metal-Dependent Phosphohydrolase; HD Domain Protein; Metal-Dependent Phosphohydrolase HD Subdomain; HD Superfamily Hydrolase; Hydrolase; Hydrolases Of HD Superfamily; Metal-Dependent Phosphohydrolase HD Region; HD Superfamily Hydrolase-Like Protein; Hydrolase Of HD Superfamily; Metal-Dependent Phosphoesterase; Xin-Antitoxin System Toxin Component PIN Family; HD Superfamily Metal-Dependent Phosphohydrolase
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MDKDRLDRQIEFIREIDKEKSIGRQTYLADASRKEDDAEHAWHMAIMTVLLSEYANEKIDVLRTMTMLLIHDLVEIDAGD TYAYDENAKKTQRERELKCADRIFSILPEDQGKYMRELWEEFEAQETPEAKFARTMDNFQPVILNDASKGKSWAEKGVHL SQILKRNARTGEGSEELWKYSYEKFIMPNVKKGNIKED
Sequences:
>Translated_198_residues MDKDRLDRQIEFIREIDKEKSIGRQTYLADASRKEDDAEHAWHMAIMTVLLSEYANEKIDVLRTMTMLLIHDLVEIDAGD TYAYDENAKKTQRERELKCADRIFSILPEDQGKYMRELWEEFEAQETPEAKFARTMDNFQPVILNDASKGKSWAEKGVHL SQILKRNARTGEGSEELWKYSYEKFIMPNVKKGNIKED >Mature_198_residues MDKDRLDRQIEFIREIDKEKSIGRQTYLADASRKEDDAEHAWHMAIMTVLLSEYANEKIDVLRTMTMLLIHDLVEIDAGD TYAYDENAKKTQRERELKCADRIFSILPEDQGKYMRELWEEFEAQETPEAKFARTMDNFQPVILNDASKGKSWAEKGVHL SQILKRNARTGEGSEELWKYSYEKFIMPNVKKGNIKED
Specific function: Unknown
COG id: COG1896
COG function: function code R; Predicted hydrolases of HD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23259; Mature: 23259
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKDRLDRQIEFIREIDKEKSIGRQTYLADASRKEDDAEHAWHMAIMTVLLSEYANEKID CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH VLRTMTMLLIHDLVEIDAGDTYAYDENAKKTQRERELKCADRIFSILPEDQGKYMRELWE HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH EFEAQETPEAKFARTMDNFQPVILNDASKGKSWAEKGVHLSQILKRNARTGEGSEELWKY HHHCCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHCCHHHHHHHHCCCCCCCHHHHHHH SYEKFIMPNVKKGNIKED HHHHHHCCCCCCCCCCCC >Mature Secondary Structure MDKDRLDRQIEFIREIDKEKSIGRQTYLADASRKEDDAEHAWHMAIMTVLLSEYANEKID CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH VLRTMTMLLIHDLVEIDAGDTYAYDENAKKTQRERELKCADRIFSILPEDQGKYMRELWE HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH EFEAQETPEAKFARTMDNFQPVILNDASKGKSWAEKGVHLSQILKRNARTGEGSEELWKY HHHCCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHCCHHHHHHHHCCCCCCCHHHHHHH SYEKFIMPNVKKGNIKED HHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA