Click here to switch to the map view.

The map label for this gene is yjcL [H]

Identifier: 238916170

GI number: 238916170

Start: 231010

End: 232218

Strand: Direct

Name: yjcL [H]

Synonym: EUBELI_00204

Alternate gene names: 238916170

Gene position: 231010-232218 (Clockwise)

Preceding gene: 238916169

Following gene: 238916171

Centisome position: 10.77

GC content: 45.74

Gene sequence:

>1209_bases
ATGCTATATATTAACCATAAGGAGAATTTATACATGATAAAAGATGGATTTTTATACCTTGCGGCGCTTATATTTGCAGC
TGCAGTATTAGTAAATCTACCCAAGATTTTTAAAGGAAAAAAGGCGCAGGTGTTCTTTAATTTTGCACCGCCGATTGTAC
TTATATATCTGGGGCTTATGCTCCTTTGCACAATGAAAGTGTGGGATCTTAGTGCAACAAGCGCTGTGTACAAATCAGTC
AAGAACCCAATATTATATGCGATGCTTTTCATAATGCTGCTTCGCTGTGATTTGAAGAAAATCATCAAGCTTGGACCTAA
AATGCTTATCGGTTTCTTCGCAGCAACATTGTCAATCGGACTTGGATTCTTCGTTTCTTATGCGATATTCCACCAGCTCT
TAGGCGCAGGTTCATGGAAAGCGCTCGGCGCGCTGTGCGGAAGCTGGATGGGCGGCGGCGGCAATATGCTCGCAATCCAG
GCAGCACTTGATGTTGACGAAGCAACAATGGCTTACGCCCTTGTTATGGATTCAATCTGCGCGACACTTTATGTAATGTT
CCTTCTGTGGGCAATCGGAAATCACGAGAAGTTCAACAAATGGACAAAGGCAGACACAAGCATAATCGACGGCGTTGGCG
CTGCACTCGAAGAGGAAGCAAAAGCCAACACAAAGCCGCTTGTATGGCAGAACATCATTCTTCTGCTCGGTTCAGGACTC
CTAGTATCTGCAGTTTCAATGGAGCTTGGCAGCATGATTAATGCACATTTATCATTCTTTGACAGCACAACATGGACAGT
GCTTATCGTATCAGTGCTTGGTATCGTATTCGCCCTGACACCATTTGGCAAGATTAAGGGAACTGAGGAGATTTCAAATG
TAATGCTTTATATAGTCATTGCCTTAATCGCTTCAAGAGCAGACCTCGGAGCAGTTGGCAATGCCCCAATATGGCTTCTC
GCAGGATTCGTAATCCTCCTTATCCATGTGGCAATAATGATTGCACTTGCGAAGATATTGAAACTCGACATCTTCACATG
CTGCGTTGCTTCCCTCGCCAACATCGGCGGAACAGCAACAGCACCGGTTCTCGCCGGCGCATACTCAAATGCCCTCGTAC
CAGTTGGTATCATGATGGCGCTGCTCGGCTATGTCGTCGGAACCGGCGGCGGCCTGGTTGTGGCTAATCTGATGAGTATA
TTTGGGTAG

Upstream 100 bases:

>100_bases
CCTGATGAGTGTATGGACGCGGCTTCAGTGGAGCGGACCTGGGAATATCTGATGGAGATACTTAAAGAAATGTAATATAC
TACAGAAAAATGGGTAGAAT

Downstream 100 bases:

>100_bases
AGTTTAATGGAATAATTGATGGAATGGATAGCACTTCGGCAGTAGATTGGTACTGCCGGGGTGCTGTTTTTTATATGGGA
TAGAATGGGGAAAATAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MLYINHKENLYMIKDGFLYLAALIFAAAVLVNLPKIFKGKKAQVFFNFAPPIVLIYLGLMLLCTMKVWDLSATSAVYKSV
KNPILYAMLFIMLLRCDLKKIIKLGPKMLIGFFAATLSIGLGFFVSYAIFHQLLGAGSWKALGALCGSWMGGGGNMLAIQ
AALDVDEATMAYALVMDSICATLYVMFLLWAIGNHEKFNKWTKADTSIIDGVGAALEEEAKANTKPLVWQNIILLLGSGL
LVSAVSMELGSMINAHLSFFDSTTWTVLIVSVLGIVFALTPFGKIKGTEEISNVMLYIVIALIASRADLGAVGNAPIWLL
AGFVILLIHVAIMIALAKILKLDIFTCCVASLANIGGTATAPVLAGAYSNALVPVGIMMALLGYVVGTGGGLVVANLMSI
FG

Sequences:

>Translated_402_residues
MLYINHKENLYMIKDGFLYLAALIFAAAVLVNLPKIFKGKKAQVFFNFAPPIVLIYLGLMLLCTMKVWDLSATSAVYKSV
KNPILYAMLFIMLLRCDLKKIIKLGPKMLIGFFAATLSIGLGFFVSYAIFHQLLGAGSWKALGALCGSWMGGGGNMLAIQ
AALDVDEATMAYALVMDSICATLYVMFLLWAIGNHEKFNKWTKADTSIIDGVGAALEEEAKANTKPLVWQNIILLLGSGL
LVSAVSMELGSMINAHLSFFDSTTWTVLIVSVLGIVFALTPFGKIKGTEEISNVMLYIVIALIASRADLGAVGNAPIWLL
AGFVILLIHVAIMIALAKILKLDIFTCCVASLANIGGTATAPVLAGAYSNALVPVGIMMALLGYVVGTGGGLVVANLMSI
FG
>Mature_402_residues
MLYINHKENLYMIKDGFLYLAALIFAAAVLVNLPKIFKGKKAQVFFNFAPPIVLIYLGLMLLCTMKVWDLSATSAVYKSV
KNPILYAMLFIMLLRCDLKKIIKLGPKMLIGFFAATLSIGLGFFVSYAIFHQLLGAGSWKALGALCGSWMGGGGNMLAIQ
AALDVDEATMAYALVMDSICATLYVMFLLWAIGNHEKFNKWTKADTSIIDGVGAALEEEAKANTKPLVWQNIILLLGSGL
LVSAVSMELGSMINAHLSFFDSTTWTVLIVSVLGIVFALTPFGKIKGTEEISNVMLYIVIALIASRADLGAVGNAPIWLL
AGFVILLIHVAIMIALAKILKLDIFTCCVASLANIGGTATAPVLAGAYSNALVPVGIMMALLGYVVGTGGGLVVANLMSI
FG

Specific function: Unknown

COG id: COG5505

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008537 [H]

Pfam domain/function: PF05684 DUF819 [H]

EC number: NA

Molecular weight: Translated: 42939; Mature: 42939

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYINHKENLYMIKDGFLYLAALIFAAAVLVNLPKIFKGKKAQVFFNFAPPIVLIYLGLM
CEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEEECCHHHHHHHHHHH
LLCTMKVWDLSATSAVYKSVKNPILYAMLFIMLLRCDLKKIIKLGPKMLIGFFAATLSIG
HHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LGFFVSYAIFHQLLGAGSWKALGALCGSWMGGGGNMLAIQAALDVDEATMAYALVMDSIC
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHH
ATLYVMFLLWAIGNHEKFNKWTKADTSIIDGVGAALEEEAKANTKPLVWQNIILLLGSGL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCH
LVSAVSMELGSMINAHLSFFDSTTWTVLIVSVLGIVFALTPFGKIKGTEEISNVMLYIVI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHH
ALIASRADLGAVGNAPIWLLAGFVILLIHVAIMIALAKILKLDIFTCCVASLANIGGTAT
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
APVLAGAYSNALVPVGIMMALLGYVVGTGGGLVVANLMSIFG
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
>Mature Secondary Structure
MLYINHKENLYMIKDGFLYLAALIFAAAVLVNLPKIFKGKKAQVFFNFAPPIVLIYLGLM
CEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEEECCHHHHHHHHHHH
LLCTMKVWDLSATSAVYKSVKNPILYAMLFIMLLRCDLKKIIKLGPKMLIGFFAATLSIG
HHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LGFFVSYAIFHQLLGAGSWKALGALCGSWMGGGGNMLAIQAALDVDEATMAYALVMDSIC
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHH
ATLYVMFLLWAIGNHEKFNKWTKADTSIIDGVGAALEEEAKANTKPLVWQNIILLLGSGL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCH
LVSAVSMELGSMINAHLSFFDSTTWTVLIVSVLGIVFALTPFGKIKGTEEISNVMLYIVI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHH
ALIASRADLGAVGNAPIWLLAGFVILLIHVAIMIALAKILKLDIFTCCVASLANIGGTAT
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
APVLAGAYSNALVPVGIMMALLGYVVGTGGGLVVANLMSIFG
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]