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The map label for this gene is ytfH [C]

Identifier: 238916165

GI number: 238916165

Start: 223587

End: 223985

Strand: Direct

Name: ytfH [C]

Synonym: EUBELI_00199

Alternate gene names: 238916165

Gene position: 223587-223985 (Clockwise)

Preceding gene: 238916163

Following gene: 238916166

Centisome position: 10.43

GC content: 37.84

Gene sequence:

>399_bases
ATGCCAAAAACAAAGGAGAGGTGTATGTATCACAAGAAATTAGAATCAGATATCAGATGTCCATTGGAATACGGCCTGGA
AGTATTTGGAGGCAAATGGAAATCAAGAGTTATATGTGTTCTGGCGGATAAGAAGATATTAAGATATAGTGAGTTAAGGG
CAGAACTGGTGAATATTACAGATGCAGTTCTTTCAACAACATTAAAGGCACTGATTGCGGATGATATTGTATCAAGGAAA
TCATATGATGAGATTCCGCCAAGAGTTGAATATTCACTTACGGAAAAGGGCTTATCTGTAATGCCGATATTGCAAAGTAT
ATGCGACTGGTCATGTGCATTTTACAAGAAAGAAACTGACAAAGAATCGAGCCAGTGCATGAAGTGCGACCATAAGTAA

Upstream 100 bases:

>100_bases
ATGGAATTATATGCATTCCCCCATATATGACGATGAATATATAAAAATCTGACATACACACTTGATTTTAAAATAATTGT
TATTATGATATTATAAAGAA

Downstream 100 bases:

>100_bases
TGGATGAAGGGAAGGTTATTGTGTGAAAAAAATAACCTTCCTTTTCAAATTAACATATATTGTGTAAAATGTTACATGGA
ACTGCCTAGCGGTATACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MPKTKERCMYHKKLESDIRCPLEYGLEVFGGKWKSRVICVLADKKILRYSELRAELVNITDAVLSTTLKALIADDIVSRK
SYDEIPPRVEYSLTEKGLSVMPILQSICDWSCAFYKKETDKESSQCMKCDHK

Sequences:

>Translated_132_residues
MPKTKERCMYHKKLESDIRCPLEYGLEVFGGKWKSRVICVLADKKILRYSELRAELVNITDAVLSTTLKALIADDIVSRK
SYDEIPPRVEYSLTEKGLSVMPILQSICDWSCAFYKKETDKESSQCMKCDHK
>Mature_131_residues
PKTKERCMYHKKLESDIRCPLEYGLEVFGGKWKSRVICVLADKKILRYSELRAELVNITDAVLSTTLKALIADDIVSRKS
YDEIPPRVEYSLTEKGLSVMPILQSICDWSCAFYKKETDKESSQCMKCDHK

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 15230; Mature: 15099

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKTKERCMYHKKLESDIRCPLEYGLEVFGGKWKSRVICVLADKKILRYSELRAELVNIT
CCCHHHHHHHHHHHHHHCCCCHHHCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
DAVLSTTLKALIADDIVSRKSYDEIPPRVEYSLTEKGLSVMPILQSICDWSCAFYKKETD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
KESSQCMKCDHK
CHHHHHHCCCCC
>Mature Secondary Structure 
PKTKERCMYHKKLESDIRCPLEYGLEVFGGKWKSRVICVLADKKILRYSELRAELVNIT
CCHHHHHHHHHHHHHHCCCCHHHCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
DAVLSTTLKALIADDIVSRKSYDEIPPRVEYSLTEKGLSVMPILQSICDWSCAFYKKETD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
KESSQCMKCDHK
CHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10086842; 11058132 [H]