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The map label for this gene is yvdB [H]

Identifier: 238916135

GI number: 238916135

Start: 196339

End: 198039

Strand: Direct

Name: yvdB [H]

Synonym: EUBELI_00169

Alternate gene names: 238916135

Gene position: 196339-198039 (Clockwise)

Preceding gene: 238916134

Following gene: 238916136

Centisome position: 9.16

GC content: 38.74

Gene sequence:

>1701_bases
ATGAGAAATGTGGTAAAACCACTTAAGGGGAAAACAATGAATCAATTCGTACCAAAGCTTTTTGATGTTATGAAAGGCTA
TTCTAAGAAGCAGTTTGTTAATGATGTTATTGCAGGTATTATAGTTGCAATCATCGCGTTACCATTATCTATCGCACTTG
CGTTGGCATCAGGAGTGGGTCCTGAGCAGGGTATCTACACAGCTATATTTGCTGGTTTTGTTATTTCATTCCTTGGCGGA
AGCAGGGTTCAGATTGCAGGACCTACAGCTGCATTTGCAACTATTGTTGCAGGAATTGTGGCACAGAACGGAATGGATGG
CCTTATTGTTGCAACAATTATGGCTGGTATCATTCTTATTATCATGGGATTTCTTAAATTTGGTAATCTTATCAGATTTA
TTCCTTATACAATTACAACTGGATTTACATTTGGTATAGCTGTTACTATTCTTGTAGGACAGATTAAGGATTTCTTAGGC
CTTGATACTTCTGCGTATACAGGACCAACTATTGAGACGCTTGATAAGTTAAATGCAGTGTTTAAATGTATTAACACATT
TAACTGGCAGGCGCTCGTTGTAGGTGGTGTTTCACTTGCAATTCTTATTATATGGCCTAGATTTAAGAAGTTAGAGAAGA
TTCCGGCATCTTTAATTGCTGTTATAGTTTCTGTAATTATGGTTAAACTTGGAATGCAGGCTAAGACTATTGGAGATTTA
TATACAATTTCAAGCAAGCTGCCGGGTATCAGCATACCACATGTTAATATAACAATGGTTAAGAATCTTTTGCCGGATGC
ATTTACAATTGCGGTACTTGCAGGTATTGAGTCACTTTTATCATGCGTTGTTTCTGATGGTATGATTGGAAGCAGACATA
AGCCTAATATGGAACTCGTTGCGCAGGGTGCAGGTAACCTTGTGTCGGCTTTATTTGGTGGAATTCCGGCAACAGGCGCA
ATCGCGAGAACAGCAGCTAATGTTAAGAATGGTGGACGTACACCAATCGCGGGTATGGTTCATTCTGTAACACTTCTTCT
TATCCTTGTTGTGCTTATGCCATATGCAGCATGGATTCCAATGCCGGCAATTGCAGCAATTCTTTTCATGGTAGCTTATA
ACATGAGTGGCTGGAGAGAAATGATTTCTCTTTGTAAGACTTCACCTAAGAGCGATATTCTTGTGCTTCTTACAACAGCA
GTACTTACTATTGTATTTGACCTTGTTGTTGCTATTGAAGTTGGTGTTGTGCTTACAGCACTTCTTTTCCTTAAGAGAAT
GGCTGATGTTACTGAAGTTAAGAGCTGGAAATATATTGGTGATAATATAGATGAGAATAACGATCCTGACAATATTAATC
TTAAGCAGGTTCCTAAGGATACGCTTGTATATGAGATTAATGGACCAATGTTTTTTGCAGCTGCGGACAAGTTTCTTGAT
ATCCAGACAGTATCAGGTTCTAAGGCAGTTATTGTAAGAATGAGAGGTGTTCCTGCAATGGATGTTACTGCTCTCAGATC
TTTAAGAAATATTCATGCGGTATGTAAAAGACATGGCGCTGTTATGATTCTTTCACATGTTAATGAACAGCCTATGTCAG
TCATGGAGCATGCTGGCTTTGCAGATGAGATTGGAAGAGATAATTTCTGTGCCAACATTGATGCAGCTCTTGAGCATGCT
AAAAATATTGTAGAAGGGTAA

Upstream 100 bases:

>100_bases
CACAGCTATTAATGGGTGTGCAGCCTTATTTATTCTTATTATTTCCGCATTAAAACGGGATTTACATATATCAGCAGGCA
TGTTATGCACTATTAAGAAT

Downstream 100 bases:

>100_bases
TGCTAAATGAAGGAAGATACACTTTCCTATATAAGAAATAATAAAGAGATTACATTTGAACAGAAGATAAGACTTGTAAT
TATGCTGAGTCTGCCTACGA

Product: sulfate permease, SulP family

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MRNVVKPLKGKTMNQFVPKLFDVMKGYSKKQFVNDVIAGIIVAIIALPLSIALALASGVGPEQGIYTAIFAGFVISFLGG
SRVQIAGPTAAFATIVAGIVAQNGMDGLIVATIMAGIILIIMGFLKFGNLIRFIPYTITTGFTFGIAVTILVGQIKDFLG
LDTSAYTGPTIETLDKLNAVFKCINTFNWQALVVGGVSLAILIIWPRFKKLEKIPASLIAVIVSVIMVKLGMQAKTIGDL
YTISSKLPGISIPHVNITMVKNLLPDAFTIAVLAGIESLLSCVVSDGMIGSRHKPNMELVAQGAGNLVSALFGGIPATGA
IARTAANVKNGGRTPIAGMVHSVTLLLILVVLMPYAAWIPMPAIAAILFMVAYNMSGWREMISLCKTSPKSDILVLLTTA
VLTIVFDLVVAIEVGVVLTALLFLKRMADVTEVKSWKYIGDNIDENNDPDNINLKQVPKDTLVYEINGPMFFAAADKFLD
IQTVSGSKAVIVRMRGVPAMDVTALRSLRNIHAVCKRHGAVMILSHVNEQPMSVMEHAGFADEIGRDNFCANIDAALEHA
KNIVEG

Sequences:

>Translated_566_residues
MRNVVKPLKGKTMNQFVPKLFDVMKGYSKKQFVNDVIAGIIVAIIALPLSIALALASGVGPEQGIYTAIFAGFVISFLGG
SRVQIAGPTAAFATIVAGIVAQNGMDGLIVATIMAGIILIIMGFLKFGNLIRFIPYTITTGFTFGIAVTILVGQIKDFLG
LDTSAYTGPTIETLDKLNAVFKCINTFNWQALVVGGVSLAILIIWPRFKKLEKIPASLIAVIVSVIMVKLGMQAKTIGDL
YTISSKLPGISIPHVNITMVKNLLPDAFTIAVLAGIESLLSCVVSDGMIGSRHKPNMELVAQGAGNLVSALFGGIPATGA
IARTAANVKNGGRTPIAGMVHSVTLLLILVVLMPYAAWIPMPAIAAILFMVAYNMSGWREMISLCKTSPKSDILVLLTTA
VLTIVFDLVVAIEVGVVLTALLFLKRMADVTEVKSWKYIGDNIDENNDPDNINLKQVPKDTLVYEINGPMFFAAADKFLD
IQTVSGSKAVIVRMRGVPAMDVTALRSLRNIHAVCKRHGAVMILSHVNEQPMSVMEHAGFADEIGRDNFCANIDAALEHA
KNIVEG
>Mature_566_residues
MRNVVKPLKGKTMNQFVPKLFDVMKGYSKKQFVNDVIAGIIVAIIALPLSIALALASGVGPEQGIYTAIFAGFVISFLGG
SRVQIAGPTAAFATIVAGIVAQNGMDGLIVATIMAGIILIIMGFLKFGNLIRFIPYTITTGFTFGIAVTILVGQIKDFLG
LDTSAYTGPTIETLDKLNAVFKCINTFNWQALVVGGVSLAILIIWPRFKKLEKIPASLIAVIVSVIMVKLGMQAKTIGDL
YTISSKLPGISIPHVNITMVKNLLPDAFTIAVLAGIESLLSCVVSDGMIGSRHKPNMELVAQGAGNLVSALFGGIPATGA
IARTAANVKNGGRTPIAGMVHSVTLLLILVVLMPYAAWIPMPAIAAILFMVAYNMSGWREMISLCKTSPKSDILVLLTTA
VLTIVFDLVVAIEVGVVLTALLFLKRMADVTEVKSWKYIGDNIDENNDPDNINLKQVPKDTLVYEINGPMFFAAADKFLD
IQTVSGSKAVIVRMRGVPAMDVTALRSLRNIHAVCKRHGAVMILSHVNEQPMSVMEHAGFADEIGRDNFCANIDAALEHA
KNIVEG

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI262206105, Length=440, Percent_Identity=26.3636363636364, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI262206075, Length=440, Percent_Identity=26.3636363636364, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI262206069, Length=440, Percent_Identity=26.3636363636364, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI262206063, Length=440, Percent_Identity=26.3636363636364, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI4557535, Length=534, Percent_Identity=24.7191011235955, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI94721255, Length=476, Percent_Identity=24.7899159663866, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI94721259, Length=476, Percent_Identity=24.7899159663866, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI94721253, Length=476, Percent_Identity=24.7899159663866, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI94721257, Length=476, Percent_Identity=24.7899159663866, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI45827800, Length=495, Percent_Identity=24.2424242424242, Blast_Score=106, Evalue=8e-23,
Organism=Homo sapiens, GI39752683, Length=495, Percent_Identity=24.2424242424242, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI20336282, Length=609, Percent_Identity=22.3316912972085, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI16306483, Length=487, Percent_Identity=24.0246406570842, Blast_Score=97, Evalue=5e-20,
Organism=Homo sapiens, GI45827802, Length=453, Percent_Identity=24.2825607064018, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI269784651, Length=491, Percent_Identity=23.4215885947047, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI47131207, Length=510, Percent_Identity=23.1372549019608, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI20336272, Length=510, Percent_Identity=23.1372549019608, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI4505697, Length=554, Percent_Identity=24.0072202166065, Blast_Score=90, Evalue=6e-18,
Organism=Homo sapiens, GI100913030, Length=399, Percent_Identity=27.3182957393484, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI45827804, Length=232, Percent_Identity=26.7241379310345, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI16418457, Length=384, Percent_Identity=25.2604166666667, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI301601599, Length=384, Percent_Identity=25.2604166666667, Blast_Score=69, Evalue=2e-11,
Organism=Escherichia coli, GI87081859, Length=556, Percent_Identity=40.8273381294964, Blast_Score=336, Evalue=3e-93,
Organism=Caenorhabditis elegans, GI17551690, Length=606, Percent_Identity=20.4620462046205, Blast_Score=111, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI86565215, Length=465, Percent_Identity=26.8817204301075, Blast_Score=110, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17566848, Length=619, Percent_Identity=23.5864297253635, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI86564876, Length=559, Percent_Identity=21.6457960644007, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI86564196, Length=494, Percent_Identity=22.8744939271255, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17562578, Length=488, Percent_Identity=23.9754098360656, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193203292, Length=525, Percent_Identity=20, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI86565213, Length=275, Percent_Identity=28.7272727272727, Blast_Score=69, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6323121, Length=446, Percent_Identity=25.5605381165919, Blast_Score=106, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6319771, Length=472, Percent_Identity=25, Blast_Score=102, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6325260, Length=624, Percent_Identity=22.4358974358974, Blast_Score=91, Evalue=4e-19,
Organism=Drosophila melanogaster, GI85815873, Length=445, Percent_Identity=26.9662921348315, Blast_Score=136, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24647160, Length=466, Percent_Identity=25.1072961373391, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI21355087, Length=466, Percent_Identity=24.8927038626609, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24663084, Length=548, Percent_Identity=24.4525547445255, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI21357695, Length=548, Percent_Identity=24.4525547445255, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24649801, Length=473, Percent_Identity=25.369978858351, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24651449, Length=465, Percent_Identity=24.7311827956989, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI21358633, Length=446, Percent_Identity=24.6636771300448, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI19922482, Length=443, Percent_Identity=25.5079006772009, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21358229, Length=160, Percent_Identity=31.25, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24666186, Length=282, Percent_Identity=26.241134751773, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 60464; Mature: 60464

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNVVKPLKGKTMNQFVPKLFDVMKGYSKKQFVNDVIAGIIVAIIALPLSIALALASGVG
CCCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEQGIYTAIFAGFVISFLGGSRVQIAGPTAAFATIVAGIVAQNGMDGLIVATIMAGIILI
CCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
IMGFLKFGNLIRFIPYTITTGFTFGIAVTILVGQIKDFLGLDTSAYTGPTIETLDKLNAV
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
FKCINTFNWQALVVGGVSLAILIIWPRFKKLEKIPASLIAVIVSVIMVKLGMQAKTIGDL
HHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
YTISSKLPGISIPHVNITMVKNLLPDAFTIAVLAGIESLLSCVVSDGMIGSRHKPNMELV
HHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
AQGAGNLVSALFGGIPATGAIARTAANVKNGGRTPIAGMVHSVTLLLILVVLMPYAAWIP
HCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
MPAIAAILFMVAYNMSGWREMISLCKTSPKSDILVLLTTAVLTIVFDLVVAIEVGVVLTA
HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFLKRMADVTEVKSWKYIGDNIDENNDPDNINLKQVPKDTLVYEINGPMFFAAADKFLD
HHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCHHCCCCCCEEEEECCCEEEEEHHHHEE
IQTVSGSKAVIVRMRGVPAMDVTALRSLRNIHAVCKRHGAVMILSHVNEQPMSVMEHAGF
EEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCC
ADEIGRDNFCANIDAALEHAKNIVEG
HHHHCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNVVKPLKGKTMNQFVPKLFDVMKGYSKKQFVNDVIAGIIVAIIALPLSIALALASGVG
CCCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEQGIYTAIFAGFVISFLGGSRVQIAGPTAAFATIVAGIVAQNGMDGLIVATIMAGIILI
CCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
IMGFLKFGNLIRFIPYTITTGFTFGIAVTILVGQIKDFLGLDTSAYTGPTIETLDKLNAV
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
FKCINTFNWQALVVGGVSLAILIIWPRFKKLEKIPASLIAVIVSVIMVKLGMQAKTIGDL
HHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
YTISSKLPGISIPHVNITMVKNLLPDAFTIAVLAGIESLLSCVVSDGMIGSRHKPNMELV
HHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
AQGAGNLVSALFGGIPATGAIARTAANVKNGGRTPIAGMVHSVTLLLILVVLMPYAAWIP
HCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
MPAIAAILFMVAYNMSGWREMISLCKTSPKSDILVLLTTAVLTIVFDLVVAIEVGVVLTA
HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFLKRMADVTEVKSWKYIGDNIDENNDPDNINLKQVPKDTLVYEINGPMFFAAADKFLD
HHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCHHCCCCCCEEEEECCCEEEEEHHHHEE
IQTVSGSKAVIVRMRGVPAMDVTALRSLRNIHAVCKRHGAVMILSHVNEQPMSVMEHAGF
EEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCC
ADEIGRDNFCANIDAALEHAKNIVEG
HHHHCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]