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The map label for this gene is yrvM [H]

Identifier: 238916014

GI number: 238916014

Start: 52646

End: 53446

Strand: Direct

Name: yrvM [H]

Synonym: EUBELI_00047

Alternate gene names: 238916014

Gene position: 52646-53446 (Clockwise)

Preceding gene: 238916012

Following gene: 238916015

Centisome position: 2.46

GC content: 39.95

Gene sequence:

>801_bases
ATGTTAAATCAGTTTTCAAGAACAGAGCTTCTGTTTGGAAAAGAAGCTATGGATATATTAGAAAATTCCCGTGTCGCAGT
ATTTGGTGTAGGCGGCGTTGGTGGATATACAGTGGAGGCACTTGTAAGAAGCGGTGTAGGTGCGATTGATGTGATAGATG
ATGATAAGGTGTGTCTTACCAATCTTAACAGGCAGATTATTGCAACAAGAAAAACAATAGGACAGTATAAGACAGATGTG
TGCAAAGAGAGAATTCATGATATTAATCCGAATTGTGAGGTTACTGTACACAAATGTTTTTTCCTTCCGGAGACTAAAGA
TCAGTTTGATTTTTCAAAATATGACTATGTAGTTGATGCGGTTGATACTGTAACAGCCAAGATAGCACTTGTAATGGCGT
GTCAGGAAGCAGGAACCCCGATTATAAGCAGTATGGGTGCTGGTAATAAACTTAATCCGGCGGAATTTGAGGTTGCTGAT
ATATATAAGACATCGGTATGCCCGCTTGCCAAAGTTATGAGAAGAGAATTAAAGAAGAGGAATGTTAAGCACCTTAAGGT
CGTATACTCTAAGGAAAAGCCCGTTCGTCCTATTGAGGATATGGGAATCAGCTGTCGTACTAATTGCATATGTCCTCCGG
GAGCAGCCCACAAATGTACAGAAAGACGCGATATTCCGGGTTCAACTGCATTTGTACCATCTGTTGTAGGACTTATAATT
GCCAGTGAAGTTATTAAAGATATTACACATGATGCAATGGTTAAAACCCGTCATGAAAATGGTGTTGACATTGAAGGCTG
A

Upstream 100 bases:

>100_bases
GTTTGATAATGCAAGCGTTTTATATAAAATTAATAATTATTGACATACCATGTAAGTAGGAATTAAAATTTAGATACAAA
AAGCAAAGAAAGGACAAACT

Downstream 100 bases:

>100_bases
TAGTGGTATTTTATATTCAACAACACATTTACACATCAAGTTAGTAGGTTAATGGGAACGCAAAAGCATATTTGCAAATG
CATTCATAATAAGGAGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MLNQFSRTELLFGKEAMDILENSRVAVFGVGGVGGYTVEALVRSGVGAIDVIDDDKVCLTNLNRQIIATRKTIGQYKTDV
CKERIHDINPNCEVTVHKCFFLPETKDQFDFSKYDYVVDAVDTVTAKIALVMACQEAGTPIISSMGAGNKLNPAEFEVAD
IYKTSVCPLAKVMRRELKKRNVKHLKVVYSKEKPVRPIEDMGISCRTNCICPPGAAHKCTERRDIPGSTAFVPSVVGLII
ASEVIKDITHDAMVKTRHENGVDIEG

Sequences:

>Translated_266_residues
MLNQFSRTELLFGKEAMDILENSRVAVFGVGGVGGYTVEALVRSGVGAIDVIDDDKVCLTNLNRQIIATRKTIGQYKTDV
CKERIHDINPNCEVTVHKCFFLPETKDQFDFSKYDYVVDAVDTVTAKIALVMACQEAGTPIISSMGAGNKLNPAEFEVAD
IYKTSVCPLAKVMRRELKKRNVKHLKVVYSKEKPVRPIEDMGISCRTNCICPPGAAHKCTERRDIPGSTAFVPSVVGLII
ASEVIKDITHDAMVKTRHENGVDIEG
>Mature_266_residues
MLNQFSRTELLFGKEAMDILENSRVAVFGVGGVGGYTVEALVRSGVGAIDVIDDDKVCLTNLNRQIIATRKTIGQYKTDV
CKERIHDINPNCEVTVHKCFFLPETKDQFDFSKYDYVVDAVDTVTAKIALVMACQEAGTPIISSMGAGNKLNPAEFEVAD
IYKTSVCPLAKVMRRELKKRNVKHLKVVYSKEKPVRPIEDMGISCRTNCICPPGAAHKCTERRDIPGSTAFVPSVVGLII
ASEVIKDITHDAMVKTRHENGVDIEG

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Homo sapiens, GI4885649, Length=136, Percent_Identity=32.3529411764706, Blast_Score=73, Evalue=2e-13,
Organism=Escherichia coli, GI1789177, Length=261, Percent_Identity=35.2490421455939, Blast_Score=160, Evalue=8e-41,
Organism=Escherichia coli, GI87082356, Length=153, Percent_Identity=32.0261437908497, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787048, Length=132, Percent_Identity=30.3030303030303, Blast_Score=72, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71984476, Length=115, Percent_Identity=31.304347826087, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322825, Length=199, Percent_Identity=35.1758793969849, Blast_Score=96, Evalue=7e-21,
Organism=Saccharomyces cerevisiae, GI6321790, Length=256, Percent_Identity=25.390625, Blast_Score=95, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6321903, Length=132, Percent_Identity=28.030303030303, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322639, Length=146, Percent_Identity=32.1917808219178, Blast_Score=66, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6325438, Length=114, Percent_Identity=29.8245614035088, Blast_Score=66, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24660640, Length=139, Percent_Identity=33.0935251798561, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24582879, Length=142, Percent_Identity=29.5774647887324, Blast_Score=75, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 29279; Mature: 29279

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNQFSRTELLFGKEAMDILENSRVAVFGVGGVGGYTVEALVRSGVGAIDVIDDDKVCLT
CCCCCCHHHHHHCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCHHHH
NLNRQIIATRKTIGQYKTDVCKERIHDINPNCEVTVHKCFFLPETKDQFDFSKYDYVVDA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHH
VDTVTAKIALVMACQEAGTPIISSMGAGNKLNPAEFEVADIYKTSVCPLAKVMRRELKKR
HHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
NVKHLKVVYSKEKPVRPIEDMGISCRTNCICPPGAAHKCTERRDIPGSTAFVPSVVGLII
CHHEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH
ASEVIKDITHDAMVKTRHENGVDIEG
HHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLNQFSRTELLFGKEAMDILENSRVAVFGVGGVGGYTVEALVRSGVGAIDVIDDDKVCLT
CCCCCCHHHHHHCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCHHHH
NLNRQIIATRKTIGQYKTDVCKERIHDINPNCEVTVHKCFFLPETKDQFDFSKYDYVVDA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHH
VDTVTAKIALVMACQEAGTPIISSMGAGNKLNPAEFEVADIYKTSVCPLAKVMRRELKKR
HHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
NVKHLKVVYSKEKPVRPIEDMGISCRTNCICPPGAAHKCTERRDIPGSTAFVPSVVGLII
CHHEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH
ASEVIKDITHDAMVKTRHENGVDIEG
HHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]