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The map label for this gene is yqfA [C]

Identifier: 238916013

GI number: 238916013

Start: 51756

End: 52472

Strand: Reverse

Name: yqfA [C]

Synonym: EUBELI_00046

Alternate gene names: 238916013

Gene position: 52472-51756 (Counterclockwise)

Preceding gene: 238916016

Following gene: 238916002

Centisome position: 2.45

GC content: 39.89

Gene sequence:

>717_bases
ATGACAACTTTTGCACCAGCACTTCATTTACAGAATGATAATATACACACTAAGATAAAGGCCCAGATGATTATTAAAGA
CCCTGGCAGTTCGATAACACATTTTATCGGCATGCTCTGTGCAATTGCAGGATTATTCCCACTTATTCTTAAAGCAGCCT
CTTATGGAACAACCGTATCTATTGTTTCAATGACTGTATTTATGGTAAGTATGATTCTTCTGTATGCAGCAAGCACAACT
TATCACACATTTGATATATCAAGTAATGTCAATATTGTGCTGAAAAGGCTTGATCACTGCATGATTCCTGTTCTTATCGC
AGGCTCATACACTCCAGTCTGCCTAATTGTACTTCATAATATATATGGCTATGTTATGTTTGGCATCGTGTGGGGAATCG
CCATTCTTGCTATCACATTCAAGCTTCTCTGGGTAACTTGTCCTAAGTGGATATCTTCAGTTCTCTACATTGTAATGGGC
TGGACATGTGTTATGGCTCTTCCTCAGATATATTCAGCACTTGCCGGAGCCGCTTTCTTCTGGCTTCTCGCCGGCGGAAT
CTTCTACACTATTGGCGGCGTAATATATGCAATTAAAATGCCTGCATTTAACGCAAAGCACCCTAACTTCGGAACACATG
AAATCTTTCATGTATTTGTTATGGCTGGAAGCCTCTGCCACTTCATACTGATGTACAACTTTGTTGCGATTATGTAA

Upstream 100 bases:

>100_bases
TTATATAAAACGCTTGCATTATCAAACCATTTGTTATATTATCATGTCAACAAGATGTAGTTTTTAATACTACATGTCAT
TATAAGAGGAGGGATTTATT

Downstream 100 bases:

>100_bases
TCACCACACACCCATAAAATATGTAAGCGGCGGATTCCCGCCGCCTTTATCTATATTAAGCACCTGCTTTGCCCTTTCAG
GCGTTATCCCACTTATATAA

Product: hypothetical protein

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTTFAPALHLQNDNIHTKIKAQMIIKDPGSSITHFIGMLCAIAGLFPLILKAASYGTTVSIVSMTVFMVSMILLYAASTT
YHTFDISSNVNIVLKRLDHCMIPVLIAGSYTPVCLIVLHNIYGYVMFGIVWGIAILAITFKLLWVTCPKWISSVLYIVMG
WTCVMALPQIYSALAGAAFFWLLAGGIFYTIGGVIYAIKMPAFNAKHPNFGTHEIFHVFVMAGSLCHFILMYNFVAIM

Sequences:

>Translated_238_residues
MTTFAPALHLQNDNIHTKIKAQMIIKDPGSSITHFIGMLCAIAGLFPLILKAASYGTTVSIVSMTVFMVSMILLYAASTT
YHTFDISSNVNIVLKRLDHCMIPVLIAGSYTPVCLIVLHNIYGYVMFGIVWGIAILAITFKLLWVTCPKWISSVLYIVMG
WTCVMALPQIYSALAGAAFFWLLAGGIFYTIGGVIYAIKMPAFNAKHPNFGTHEIFHVFVMAGSLCHFILMYNFVAIM
>Mature_237_residues
TTFAPALHLQNDNIHTKIKAQMIIKDPGSSITHFIGMLCAIAGLFPLILKAASYGTTVSIVSMTVFMVSMILLYAASTTY
HTFDISSNVNIVLKRLDHCMIPVLIAGSYTPVCLIVLHNIYGYVMFGIVWGIAILAITFKLLWVTCPKWISSVLYIVMGW
TCVMALPQIYSALAGAAFFWLLAGGIFYTIGGVIYAIKMPAFNAKHPNFGTHEIFHVFVMAGSLCHFILMYNFVAIM

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Escherichia coli, GI1789266, Length=212, Percent_Identity=33.4905660377358, Blast_Score=114, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 26262; Mature: 26131

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFAPALHLQNDNIHTKIKAQMIIKDPGSSITHFIGMLCAIAGLFPLILKAASYGTTVS
CCCCCCEEEECCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IVSMTVFMVSMILLYAASTTYHTFDISSNVNIVLKRLDHCMIPVLIAGSYTPVCLIVLHN
HHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
IYGYVMFGIVWGIAILAITFKLLWVTCPKWISSVLYIVMGWTCVMALPQIYSALAGAAFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLLAGGIFYTIGGVIYAIKMPAFNAKHPNFGTHEIFHVFVMAGSLCHFILMYNFVAIM
HHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTFAPALHLQNDNIHTKIKAQMIIKDPGSSITHFIGMLCAIAGLFPLILKAASYGTTVS
CCCCCEEEECCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IVSMTVFMVSMILLYAASTTYHTFDISSNVNIVLKRLDHCMIPVLIAGSYTPVCLIVLHN
HHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
IYGYVMFGIVWGIAILAITFKLLWVTCPKWISSVLYIVMGWTCVMALPQIYSALAGAAFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLLAGGIFYTIGGVIYAIKMPAFNAKHPNFGTHEIFHVFVMAGSLCHFILMYNFVAIM
HHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]