Click here to switch to the map view.

The map label for this gene is ybhH [H]

Identifier: 238897152

GI number: 238897152

Start: 5152365

End: 5153450

Strand: Reverse

Name: ybhH [H]

Synonym: KP1_5416

Alternate gene names: 238897152

Gene position: 5153450-5152365 (Counterclockwise)

Preceding gene: 238897153

Following gene: 238897151

Centisome position: 98.19

GC content: 65.29

Gene sequence:

>1086_bases
ATGGCGCAACGCGGAATCCCCTGTCTATGGATGCGCGGCGGCACCTCTAAAGCGGCCTGTTTTCTGGCCGACGATCTGCC
TGCCGATCCGGTGCGACGTGATGCGGTGCTGCTGGCGGTGATGGGCTCGCCTGATCCCCGGCAAATTGACGGGATCGGCG
GCGCCGATCCGCTGACCAGCAAAGTGGCGATTATCCGCCGCTCCGCACGGCCTGACGCCGATGTGGACTATCTGTTTGCC
CAGGTGAACGTGGCGGCGGCTACCGTGGATTATGGCCAAAACTGCGGCAATATTCTCGCCGCCGTTGGCCCTTTCGCCAT
CGAGCGCGGTCTGGTTCGCCACGATGCGCCGCTCACTCGGGTGCGTATTTTTATGGAGAACACGGGGCAACTGGCGGTGG
CAGAGATCCCCTGCGATGCCGACGGGGTTGACTACGTCGGCGAGAGTCGTATCGATGGCGTGCCGGGCAGCGCCAGCCCG
ATCCTGCTCCATTTTCTTGATGTCGCCGGCTCCAGCTGCGGGGCCCTGCTGCCGACCGGCCGGGTTCGTGACCGTTTTGA
CGGCGTCGAGGTGACCTGCATCGATAACGGAATGCCGGTGATCCTGCTGCGCGCGTGCGACCTCGGTTGCACCGGCTATG
AGACGCGCGAACAGCTGGATAATGACGACGCGCTTAAACGTCGCCTGGAGTCGATTCGCCTGCAGGCCGGGCCGCTGATG
CAGCTTGGCGACGTCAGCCAGCGCACGGTGCCCAAGATGACCCTGATCGCCGAGCCGCGACACGGCGGCGCCATCAGCAG
CCGCACCTTTATCCCCCACCGCTGCCACGCGTCGATCGGCGTATTTGGCGCGGTGAGCGTGGCCAGCGCTTGTCTGCTCC
CCGGCTCTGTCGCGCAGGGCCTGGCGCAGGTAGCGCCAGGCGATACGCCGCTGCTCAGCGTCGAGCATCCGACAGGCGAA
TTTAGCGTGACGCTTCAGCTTGATGCTGACGGCGCCCTGGCTGGCTGCGGCCTGTTACGCACGGCGCGACTGCTGTTTGC
TGGCGAGGTTTTTATTCCGGCCCGCGTCTGGCCGCGTGAGGAGTGA

Upstream 100 bases:

>100_bases
GCGCAATGGCGAGTTGGGGCTGGATATTTACGCTATGCGTCCGCGTCTGGCGGAAAAGGGCCTGCGGTATTACGACCGCG
CAGACGAGGTGGAGGAATAA

Downstream 100 bases:

>100_bases
TGATGACAATCGCGTTTATTGGTTTTGGCGAGGCGGGTGGCATTCTGGCGGCGGATCTGGCCCGTGAGCATGCGGTGACC
ATTTGGGATTGCAAGCTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MAQRGIPCLWMRGGTSKAACFLADDLPADPVRRDAVLLAVMGSPDPRQIDGIGGADPLTSKVAIIRRSARPDADVDYLFA
QVNVAAATVDYGQNCGNILAAVGPFAIERGLVRHDAPLTRVRIFMENTGQLAVAEIPCDADGVDYVGESRIDGVPGSASP
ILLHFLDVAGSSCGALLPTGRVRDRFDGVEVTCIDNGMPVILLRACDLGCTGYETREQLDNDDALKRRLESIRLQAGPLM
QLGDVSQRTVPKMTLIAEPRHGGAISSRTFIPHRCHASIGVFGAVSVASACLLPGSVAQGLAQVAPGDTPLLSVEHPTGE
FSVTLQLDADGALAGCGLLRTARLLFAGEVFIPARVWPREE

Sequences:

>Translated_361_residues
MAQRGIPCLWMRGGTSKAACFLADDLPADPVRRDAVLLAVMGSPDPRQIDGIGGADPLTSKVAIIRRSARPDADVDYLFA
QVNVAAATVDYGQNCGNILAAVGPFAIERGLVRHDAPLTRVRIFMENTGQLAVAEIPCDADGVDYVGESRIDGVPGSASP
ILLHFLDVAGSSCGALLPTGRVRDRFDGVEVTCIDNGMPVILLRACDLGCTGYETREQLDNDDALKRRLESIRLQAGPLM
QLGDVSQRTVPKMTLIAEPRHGGAISSRTFIPHRCHASIGVFGAVSVASACLLPGSVAQGLAQVAPGDTPLLSVEHPTGE
FSVTLQLDADGALAGCGLLRTARLLFAGEVFIPARVWPREE
>Mature_360_residues
AQRGIPCLWMRGGTSKAACFLADDLPADPVRRDAVLLAVMGSPDPRQIDGIGGADPLTSKVAIIRRSARPDADVDYLFAQ
VNVAAATVDYGQNCGNILAAVGPFAIERGLVRHDAPLTRVRIFMENTGQLAVAEIPCDADGVDYVGESRIDGVPGSASPI
LLHFLDVAGSSCGALLPTGRVRDRFDGVEVTCIDNGMPVILLRACDLGCTGYETREQLDNDDALKRRLESIRLQAGPLMQ
LGDVSQRTVPKMTLIAEPRHGGAISSRTFIPHRCHASIGVFGAVSVASACLLPGSVAQGLAQVAPGDTPLLSVEHPTGEF
SVTLQLDADGALAGCGLLRTARLLFAGEVFIPARVWPREE

Specific function: Unknown

COG id: COG2828

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yraM [H]

Homologues:

Organism=Escherichia coli, GI1786985, Length=352, Percent_Identity=49.4318181818182, Blast_Score=331, Evalue=4e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007400 [H]

Pfam domain/function: PF04303 PrpF [H]

EC number: NA

Molecular weight: Translated: 38126; Mature: 37995

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQRGIPCLWMRGGTSKAACFLADDLPADPVRRDAVLLAVMGSPDPRQIDGIGGADPLTS
CCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCHHH
KVAIIRRSARPDADVDYLFAQVNVAAATVDYGQNCGNILAAVGPFAIERGLVRHDAPLTR
HHHHHHHCCCCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHCCCCCEE
VRIFMENTGQLAVAEIPCDADGVDYVGESRIDGVPGSASPILLHFLDVAGSSCGALLPTG
EEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
RVRDRFDGVEVTCIDNGMPVILLRACDLGCTGYETREQLDNDDALKRRLESIRLQAGPLM
CCHHHCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCC
QLGDVSQRTVPKMTLIAEPRHGGAISSRTFIPHRCHASIGVFGAVSVASACLLPGSVAQG
CCCCCCHHCCCCEEEEECCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCHHHHH
LAQVAPGDTPLLSVEHPTGEFSVTLQLDADGALAGCGLLRTARLLFAGEVFIPARVWPRE
HHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCC
E
C
>Mature Secondary Structure 
AQRGIPCLWMRGGTSKAACFLADDLPADPVRRDAVLLAVMGSPDPRQIDGIGGADPLTS
CCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCHHH
KVAIIRRSARPDADVDYLFAQVNVAAATVDYGQNCGNILAAVGPFAIERGLVRHDAPLTR
HHHHHHHCCCCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHCCCCCEE
VRIFMENTGQLAVAEIPCDADGVDYVGESRIDGVPGSASPILLHFLDVAGSSCGALLPTG
EEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
RVRDRFDGVEVTCIDNGMPVILLRACDLGCTGYETREQLDNDDALKRRLESIRLQAGPLM
CCHHHCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCC
QLGDVSQRTVPKMTLIAEPRHGGAISSRTFIPHRCHASIGVFGAVSVASACLLPGSVAQG
CCCCCCHHCCCCEEEEECCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCHHHHH
LAQVAPGDTPLLSVEHPTGEFSVTLQLDADGALAGCGLLRTARLLFAGEVFIPARVWPRE
HHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]