Click here to switch to the map view.

The map label for this gene is yicL [H]

Identifier: 238897149

GI number: 238897149

Start: 5150196

End: 5151098

Strand: Direct

Name: yicL [H]

Synonym: KP1_5413

Alternate gene names: 238897149

Gene position: 5150196-5151098 (Clockwise)

Preceding gene: 238897148

Following gene: 238897150

Centisome position: 98.13

GC content: 61.68

Gene sequence:

>903_bases
ATGGGCTCCAGCAAAAAAGGGATGCTGAACGTACTGATTGCCGCCGTGCTGTGGGGCAGTTCCGGGGTGTGTGCGCAATT
TATTATGCAGGAAAGCCAGATGTCGTCGCCGTTTCTGACCATGACGCGTCTGCTGTTCGCCGGGCTGATCCTGCTGATGC
TCGGCTTTGTTCACGGCGACCGCATTTTCCGCGTGCTGCAAAACCGCCGCGACGCCCTAAGCCTGCTGTTTTTCTCGCTG
TTTGGCGCGCTAACCGTGCAGTTCACCTTTCTGATGACCATTGAAAAATCCAATGCCGCCACGGCCACGGTGCTGCAGTT
TCTGTCGCCGACGATCATCGTCGCCTGGTTCGCCCTCGCCCGCAAAGCGCGTCCCACTCCGCTGGTGCTGGGGGCTATCT
GCACCTCGCTGGCGGGCACCTTTCTGCTGGTGACCCACGGCAACCCAACGACGCTGTCGATTTCGCCGGCGGCGCTGTTC
TGGGGGATCGCCTCGGCGTTTGCCGCCGCCTTTTATACCACCTATCCTTCAACGCTGATTGCCCGCTACGGGACGCTGCC
CATCGTCGGCTGGAGCATGCTGTTCGGCGGCGCGATGCTATTGCCGTTTTACGGCGGCCAGGGCACCGATTTTGTGGTTA
ACGGCAGCCTGCTGTTAGCTTTTTTCTACCTGGTGGTGATCGGTACTTCGCTGACCTTCAGCCTCTATCTCAACGGCGCG
CAGAAGATTGGCGGCGCAAAGGCCGGGATCCTCAGCTGCGCCGAACCGCTGAGCAGCGCCCTGCTGTCGCTCCTGCTGCT
GGGGATCACCTTCACGCTGCCGGACTGGCTGGGCACTCTGCTGATCCTCGCGTCGGTGGTGCTGATCGCCATCGACTCGC
GGCGGCGGGTGAGAGCCGCCTGA

Upstream 100 bases:

>100_bases
AAAATAGTTACGCCGCCGCGCCCGACTACCATTTCCTGCCCCGCCGCCCGGGCGCGCGCATGCTATGATTCCCCTTTGTC
ATATTTCGCTTGAGGAAAAG

Downstream 100 bases:

>100_bases
GCAGGCGAGAAAAAGCGCATTTTCAATAAGTTAAACTGACCACTATTTGCGTGTTTTCGCGCCTGCGCATATAGTTGACG
GAAGCGATTACGGAAGGAGA

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MGSSKKGMLNVLIAAVLWGSSGVCAQFIMQESQMSSPFLTMTRLLFAGLILLMLGFVHGDRIFRVLQNRRDALSLLFFSL
FGALTVQFTFLMTIEKSNAATATVLQFLSPTIIVAWFALARKARPTPLVLGAICTSLAGTFLLVTHGNPTTLSISPAALF
WGIASAFAAAFYTTYPSTLIARYGTLPIVGWSMLFGGAMLLPFYGGQGTDFVVNGSLLLAFFYLVVIGTSLTFSLYLNGA
QKIGGAKAGILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILASVVLIAIDSRRRVRAA

Sequences:

>Translated_300_residues
MGSSKKGMLNVLIAAVLWGSSGVCAQFIMQESQMSSPFLTMTRLLFAGLILLMLGFVHGDRIFRVLQNRRDALSLLFFSL
FGALTVQFTFLMTIEKSNAATATVLQFLSPTIIVAWFALARKARPTPLVLGAICTSLAGTFLLVTHGNPTTLSISPAALF
WGIASAFAAAFYTTYPSTLIARYGTLPIVGWSMLFGGAMLLPFYGGQGTDFVVNGSLLLAFFYLVVIGTSLTFSLYLNGA
QKIGGAKAGILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILASVVLIAIDSRRRVRAA
>Mature_299_residues
GSSKKGMLNVLIAAVLWGSSGVCAQFIMQESQMSSPFLTMTRLLFAGLILLMLGFVHGDRIFRVLQNRRDALSLLFFSLF
GALTVQFTFLMTIEKSNAATATVLQFLSPTIIVAWFALARKARPTPLVLGAICTSLAGTFLLVTHGNPTTLSISPAALFW
GIASAFAAAFYTTYPSTLIARYGTLPIVGWSMLFGGAMLLPFYGGQGTDFVVNGSLLLAFFYLVVIGTSLTFSLYLNGAQ
KIGGAKAGILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILASVVLIAIDSRRRVRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1790092, Length=298, Percent_Identity=83.5570469798658, Blast_Score=476, Evalue=1e-136,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32042; Mature: 31910

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSSKKGMLNVLIAAVLWGSSGVCAQFIMQESQMSSPFLTMTRLLFAGLILLMLGFVHGD
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
RIFRVLQNRRDALSLLFFSLFGALTVQFTFLMTIEKSNAATATVLQFLSPTIIVAWFALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
RKARPTPLVLGAICTSLAGTFLLVTHGNPTTLSISPAALFWGIASAFAAAFYTTYPSTLI
HCCCCCHHHHHHHHHHHCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
ARYGTLPIVGWSMLFGGAMLLPFYGGQGTDFVVNGSLLLAFFYLVVIGTSLTFSLYLNGA
HHHCCCHHHHHHHHHCCHHEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHEEEEEECCH
QKIGGAKAGILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILASVVLIAIDSRRRVRAA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GSSKKGMLNVLIAAVLWGSSGVCAQFIMQESQMSSPFLTMTRLLFAGLILLMLGFVHGD
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
RIFRVLQNRRDALSLLFFSLFGALTVQFTFLMTIEKSNAATATVLQFLSPTIIVAWFALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
RKARPTPLVLGAICTSLAGTFLLVTHGNPTTLSISPAALFWGIASAFAAAFYTTYPSTLI
HCCCCCHHHHHHHHHHHCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
ARYGTLPIVGWSMLFGGAMLLPFYGGQGTDFVVNGSLLLAFFYLVVIGTSLTFSLYLNGA
HHHCCCHHHHHHHHHCCHHEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHEEEEEECCH
QKIGGAKAGILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILASVVLIAIDSRRRVRAA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]