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The map label for this gene is yrfF [H]

Identifier: 238896866

GI number: 238896866

Start: 4829894

End: 4832023

Strand: Direct

Name: yrfF [H]

Synonym: KP1_5099

Alternate gene names: 238896866

Gene position: 4829894-4832023 (Clockwise)

Preceding gene: 238896864

Following gene: 238896867

Centisome position: 92.02

GC content: 58.97

Gene sequence:

>2130_bases
ATGGGCACCTTTCTGATATTCCTTACAGCTCTGCTAATCTGCGTATTGCTCATCGGATGGTGGTATCGCGCTCACGCCAG
ACGCCGCCGACTCCCCCTACTGCACGCCTTTAGCGACGCTACCACGCGGCAGCTTCCTGCGGATGAGCGCCAGGCTATTG
AGAAGTATGTTGCCGAGTTGAGCCACGCCCAGCAGGTGCCGGCGTCCGGTGCGACCAGCGCGCCTGTCGCTCTGGCGCTG
AACGAACAGAGTGATACCGTCTATGCGGTGACACGCGCCATCACCCGCTACGGGATCACCACTGACGCGCCGAATAAATG
GCGCTATTTCCTCGATTCGGTTGAAGTTCATCTGCCGCCGTTCTGGGAACAGCATATCAACGATGAAAACAGCGTCGAGC
TGATCCCCACCGACAGCCTGCCGCTGGTTATCACCCTTAACGGTCATAGCCTGAGCGACTATCGCCAGGAAGCGCAAAGC
TACGCCCTGGAACGCGCTTCGGCCACCCAGGCCTCCATTCGCGGCGAAGAGAGCGAGCAGGTAGAGTTGCGGCAGATCCG
TCGGGAAACGCCTGAAGAACACGCTCTGAATCGCCCGGACGGGCTGCGCGAAGCGATCCTGATCGTCGCCTCCTTTCTGT
TCTTTTATTTCAGCCTGATTGGGCCAGCTGTCTTTACCCCCTGGCTGGTCGCCGCAGGTTTGTTGCTGCTCGCCGCCGGA
CTGTGGGGGATTTATGCCCCGCCGCGTCGCGCCGCGCTGCGCGAAATCCATTGCCTGCGGGGCGTCCCTAAGCGCTGGGG
ATTGTTTGGCGAAAACGATCAGGAGCAAATCAATAACATCTCGCTGGGCATTATCGATCTCATCTATCCGCGCCACTGGC
AACCCTGGATTGCCCAGGACCTGGGGCAGCAGACCGATATTGATATCTATCTCAACCGCCACGTGGCCCGTCAGGGACGC
TACCTGTCGCTTCATGATGAAGTGAAAAACTTCCCGCTGCAGTACTGGCTACGCAGCGCGATTATCGCCGCCGGCGCCCT
GGTGGTGGTGATTATGCTGTGGGCCAGCGTACCGTTGAATATGCCGTTTAAGTTCACCCTGTCGTGGCTGAAGGGTGCGC
AAACGATTGAAGCCACTACCGTCAGCCAGCTGGAAAAAGCCCATGTGCGCATTGGCGATACGCTGCGCCTGACCGGTACC
GGGATGTGTAATATCCGCACACCGGGCAGTTGGTCCGCCAAAGAGGATTCGCCGTTCCTGCCTTTCGATTGTTCACAGAT
TGTGTGGAACGACGCCCCTCCTCTGCCGCTGCCGGAGTCTGACATTGTCAGCAAAGCGACCGCCCTGATGCAGTCCATCC
AGCGCCAGCTGCACCCGGAAACCGACGATGATTCCCGCGTCAGCCCTGCCCTACGCTCCGCCATTCAGAAATCAGGCATG
GTGCTACTGGATGATTTCGGCGATATCGTGCAGAAAACTAACGATCTCTGCTCGGCAAAGGATGATTGCCTGCGGCTGAA
GAATGCGTTGGTCAATCTTGGCAATACCCGTAACTGGGAAACGTTAACCAAGCGCGCCACCGCCGGCAAGCTGGATGGCG
TGAACGTGCTGCTGCGGCCGGTCAGCGCCGAGTCGCTGGAGAATCTGGTGACCACCTCAACCGCGCCCTTTGTGATACGC
GAAACCTCGCGGGCCGCGCAGGCGCTGAACAGCCCGGCTCCCGGCGGTTTTCTTATCGCCAGCGATGAGGGCAGCGTACT
GGTCAATCAGCCGTGGCCGGCGGTGAGTCTGTATGATTATCCGGCCCATGAGCAGTGGGGCGAACTGCGGCGGCTGGCCG
GTATGCTCATGCATACCCCCTTCCATGCCGAAGGTATCGTTACCAACCTGTTTACTGACGCCAACGGCACGCAGCATATC
AACCTGCATCGCATCCCCGACCGCAGCGGCCTGTGGCGTTATCTGGGCATCACCCTGCTGCTGCTGTCAATGGTGGGGTG
CATGGCTTACCACGCCGTGCAGGCCCTGCGTCGTTATCAACGCCATCGTCAGCGTATGGAAGAGATTCAGAAATATTACG
AAAGCTGCCTTAATCCGGTTTTGCTCCCCTCATCTGACTCGCAAGATTAA

Upstream 100 bases:

>100_bases
CTACCCTGTAAGCAGGTGCGCCGCTAACACTGCAGCTTGACGTTAGTCTTCACGTTCACCGACGATTTCGTAAGAAAAAA
ATAACTTTGATGGGATGGGC

Downstream 100 bases:

>100_bases
TTTTCCCGGCGACAGGGTGTGATACCCTGTCGCCCATTTTCCGCTCGCTGGAGAGTCATCATGCACTTTGATATCGCCTG
GCAGGAGGTCGATACCGTTC

Product: putative dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 709; Mature: 708

Protein sequence:

>709_residues
MGTFLIFLTALLICVLLIGWWYRAHARRRRLPLLHAFSDATTRQLPADERQAIEKYVAELSHAQQVPASGATSAPVALAL
NEQSDTVYAVTRAITRYGITTDAPNKWRYFLDSVEVHLPPFWEQHINDENSVELIPTDSLPLVITLNGHSLSDYRQEAQS
YALERASATQASIRGEESEQVELRQIRRETPEEHALNRPDGLREAILIVASFLFFYFSLIGPAVFTPWLVAAGLLLLAAG
LWGIYAPPRRAALREIHCLRGVPKRWGLFGENDQEQINNISLGIIDLIYPRHWQPWIAQDLGQQTDIDIYLNRHVARQGR
YLSLHDEVKNFPLQYWLRSAIIAAGALVVVIMLWASVPLNMPFKFTLSWLKGAQTIEATTVSQLEKAHVRIGDTLRLTGT
GMCNIRTPGSWSAKEDSPFLPFDCSQIVWNDAPPLPLPESDIVSKATALMQSIQRQLHPETDDDSRVSPALRSAIQKSGM
VLLDDFGDIVQKTNDLCSAKDDCLRLKNALVNLGNTRNWETLTKRATAGKLDGVNVLLRPVSAESLENLVTTSTAPFVIR
ETSRAAQALNSPAPGGFLIASDEGSVLVNQPWPAVSLYDYPAHEQWGELRRLAGMLMHTPFHAEGIVTNLFTDANGTQHI
NLHRIPDRSGLWRYLGITLLLLSMVGCMAYHAVQALRRYQRHRQRMEEIQKYYESCLNPVLLPSSDSQD

Sequences:

>Translated_709_residues
MGTFLIFLTALLICVLLIGWWYRAHARRRRLPLLHAFSDATTRQLPADERQAIEKYVAELSHAQQVPASGATSAPVALAL
NEQSDTVYAVTRAITRYGITTDAPNKWRYFLDSVEVHLPPFWEQHINDENSVELIPTDSLPLVITLNGHSLSDYRQEAQS
YALERASATQASIRGEESEQVELRQIRRETPEEHALNRPDGLREAILIVASFLFFYFSLIGPAVFTPWLVAAGLLLLAAG
LWGIYAPPRRAALREIHCLRGVPKRWGLFGENDQEQINNISLGIIDLIYPRHWQPWIAQDLGQQTDIDIYLNRHVARQGR
YLSLHDEVKNFPLQYWLRSAIIAAGALVVVIMLWASVPLNMPFKFTLSWLKGAQTIEATTVSQLEKAHVRIGDTLRLTGT
GMCNIRTPGSWSAKEDSPFLPFDCSQIVWNDAPPLPLPESDIVSKATALMQSIQRQLHPETDDDSRVSPALRSAIQKSGM
VLLDDFGDIVQKTNDLCSAKDDCLRLKNALVNLGNTRNWETLTKRATAGKLDGVNVLLRPVSAESLENLVTTSTAPFVIR
ETSRAAQALNSPAPGGFLIASDEGSVLVNQPWPAVSLYDYPAHEQWGELRRLAGMLMHTPFHAEGIVTNLFTDANGTQHI
NLHRIPDRSGLWRYLGITLLLLSMVGCMAYHAVQALRRYQRHRQRMEEIQKYYESCLNPVLLPSSDSQD
>Mature_708_residues
GTFLIFLTALLICVLLIGWWYRAHARRRRLPLLHAFSDATTRQLPADERQAIEKYVAELSHAQQVPASGATSAPVALALN
EQSDTVYAVTRAITRYGITTDAPNKWRYFLDSVEVHLPPFWEQHINDENSVELIPTDSLPLVITLNGHSLSDYRQEAQSY
ALERASATQASIRGEESEQVELRQIRRETPEEHALNRPDGLREAILIVASFLFFYFSLIGPAVFTPWLVAAGLLLLAAGL
WGIYAPPRRAALREIHCLRGVPKRWGLFGENDQEQINNISLGIIDLIYPRHWQPWIAQDLGQQTDIDIYLNRHVARQGRY
LSLHDEVKNFPLQYWLRSAIIAAGALVVVIMLWASVPLNMPFKFTLSWLKGAQTIEATTVSQLEKAHVRIGDTLRLTGTG
MCNIRTPGSWSAKEDSPFLPFDCSQIVWNDAPPLPLPESDIVSKATALMQSIQRQLHPETDDDSRVSPALRSAIQKSGMV
LLDDFGDIVQKTNDLCSAKDDCLRLKNALVNLGNTRNWETLTKRATAGKLDGVNVLLRPVSAESLENLVTTSTAPFVIRE
TSRAAQALNSPAPGGFLIASDEGSVLVNQPWPAVSLYDYPAHEQWGELRRLAGMLMHTPFHAEGIVTNLFTDANGTQHIN
LHRIPDRSGLWRYLGITLLLLSMVGCMAYHAVQALRRYQRHRQRMEEIQKYYESCLNPVLLPSSDSQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the igaA family [H]

Homologues:

Organism=Escherichia coli, GI1789801, Length=708, Percent_Identity=72.4576271186441, Blast_Score=1023, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010771
- ProDom:   PD147088 [H]

Pfam domain/function: PF07095 IgaA [H]

EC number: NA

Molecular weight: Translated: 79548; Mature: 79417

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTFLIFLTALLICVLLIGWWYRAHARRRRLPLLHAFSDATTRQLPADERQAIEKYVAEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHCCCCHHHHHHHHHHHHH
SHAQQVPASGATSAPVALALNEQSDTVYAVTRAITRYGITTDAPNKWRYFLDSVEVHLPP
HHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC
FWEQHINDENSVELIPTDSLPLVITLNGHSLSDYRQEAQSYALERASATQASIRGEESEQ
HHHHHCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VELRQIRRETPEEHALNRPDGLREAILIVASFLFFYFSLIGPAVFTPWLVAAGLLLLAAG
HHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWGIYAPPRRAALREIHCLRGVPKRWGLFGENDQEQINNISLGIIDLIYPRHWQPWIAQD
HHHCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCHHHHH
LGQQTDIDIYLNRHVARQGRYLSLHDEVKNFPLQYWLRSAIIAAGALVVVIMLWASVPLN
CCCCCCEEEEECHHHHHCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
MPFKFTLSWLKGAQTIEATTVSQLEKAHVRIGDTLRLTGTGMCNIRTPGSWSAKEDSPFL
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCEEEEECCCEEEECCCCCCCCCCCCCCC
PFDCSQIVWNDAPPLPLPESDIVSKATALMQSIQRQLHPETDDDSRVSPALRSAIQKSGM
CCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
VLLDDFGDIVQKTNDLCSAKDDCLRLKNALVNLGNTRNWETLTKRATAGKLDGVNVLLRP
EEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEC
VSAESLENLVTTSTAPFVIRETSRAAQALNSPAPGGFLIASDEGSVLVNQPWPAVSLYDY
CCHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCEEEECC
PAHEQWGELRRLAGMLMHTPFHAEGIVTNLFTDANGTQHINLHRIPDRSGLWRYLGITLL
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCEEEEEEECCCCCCHHHHHHHHHH
LLSMVGCMAYHAVQALRRYQRHRQRMEEIQKYYESCLNPVLLPSSDSQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC
>Mature Secondary Structure 
GTFLIFLTALLICVLLIGWWYRAHARRRRLPLLHAFSDATTRQLPADERQAIEKYVAEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHCCCCHHHHHHHHHHHHH
SHAQQVPASGATSAPVALALNEQSDTVYAVTRAITRYGITTDAPNKWRYFLDSVEVHLPP
HHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC
FWEQHINDENSVELIPTDSLPLVITLNGHSLSDYRQEAQSYALERASATQASIRGEESEQ
HHHHHCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VELRQIRRETPEEHALNRPDGLREAILIVASFLFFYFSLIGPAVFTPWLVAAGLLLLAAG
HHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWGIYAPPRRAALREIHCLRGVPKRWGLFGENDQEQINNISLGIIDLIYPRHWQPWIAQD
HHHCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCHHHHH
LGQQTDIDIYLNRHVARQGRYLSLHDEVKNFPLQYWLRSAIIAAGALVVVIMLWASVPLN
CCCCCCEEEEECHHHHHCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
MPFKFTLSWLKGAQTIEATTVSQLEKAHVRIGDTLRLTGTGMCNIRTPGSWSAKEDSPFL
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCEEEEECCCEEEECCCCCCCCCCCCCCC
PFDCSQIVWNDAPPLPLPESDIVSKATALMQSIQRQLHPETDDDSRVSPALRSAIQKSGM
CCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
VLLDDFGDIVQKTNDLCSAKDDCLRLKNALVNLGNTRNWETLTKRATAGKLDGVNVLLRP
EEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEC
VSAESLENLVTTSTAPFVIRETSRAAQALNSPAPGGFLIASDEGSVLVNQPWPAVSLYDY
CCHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCEEEECC
PAHEQWGELRRLAGMLMHTPFHAEGIVTNLFTDANGTQHINLHRIPDRSGLWRYLGITLL
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCEEEEEEECCCCCCHHHHHHHHHH
LLSMVGCMAYHAVQALRRYQRHRQRMEEIQKYYESCLNPVLLPSSDSQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]