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The map label for this gene is yhcB [H]

Identifier: 238896729

GI number: 238896729

Start: 4708308

End: 4708712

Strand: Direct

Name: yhcB [H]

Synonym: KP1_4945

Alternate gene names: 238896729

Gene position: 4708308-4708712 (Clockwise)

Preceding gene: 238896722

Following gene: 238896730

Centisome position: 89.71

GC content: 56.3

Gene sequence:

>405_bases
ATGTTCATGACCTGGGAATACGCGCTAATTGGGTTAGTCGTCGGTATCATCATTGGTGCCGTCGCCATGCGTTTCGGCAA
CCGCAAACTGCGCCAACAGCAGGCGCTGCAGTACGAACTGGAAAAGAATAAAGCCGAGCTTGAAGAGTACCGTGAAGAGC
TGGTGAGCCACTTTGCGCGTAGCGCCGAACTGCTGGATAACATGGCGCACGACTATCGTCAGCTATATCAGCATATGGCG
AAAAGCTCTAACAACCTGCTGCCGGACTCGATGGCAGACGCCAACCCGTTCCGCAACCGTCTGGAAGAGTCTGAAGCCAG
CAACGATCAGGCGCCGGTCCAGATGCCGCGCGACTACTCCGAGGGCGCATCCGGTTTACTGCGCGGAGGCGCAAAACGCG
ATTAA

Upstream 100 bases:

>100_bases
GCCAGGATTCCACTTCTGTGGAATTAGCGGTTATAGTGGCACTATCGGGCGCAGGCGGAGAGCCTAAGAGCCACCCTACG
GAACCACAATACAACGGGAG

Downstream 100 bases:

>100_bases
GCCTCGCTGCGATTAAAATATTCTCCGGGCGCGCCCGTCGCGCCCGCTCCTTCCCCCACTTCCCGGCTACAATTTAAACC
AGTCCCCACGTTGTTACCTG

Product: cytochrome d ubiquinol oxidase subunit III

Products: NA

Alternate protein names: Cytochrome bd-I oxidase subunit III [H]

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MFMTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELEEYREELVSHFARSAELLDNMAHDYRQLYQHMA
KSSNNLLPDSMADANPFRNRLEESEASNDQAPVQMPRDYSEGASGLLRGGAKRD

Sequences:

>Translated_134_residues
MFMTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELEEYREELVSHFARSAELLDNMAHDYRQLYQHMA
KSSNNLLPDSMADANPFRNRLEESEASNDQAPVQMPRDYSEGASGLLRGGAKRD
>Mature_134_residues
MFMTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELEEYREELVSHFARSAELLDNMAHDYRQLYQHMA
KSSNNLLPDSMADANPFRNRLEESEASNDQAPVQMPRDYSEGASGLLRGGAKRD

Specific function: Unknown

COG id: COG3105

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1628 [H]

Homologues:

Organism=Escherichia coli, GI87082232, Length=132, Percent_Identity=92.4242424242424, Blast_Score=238, Evalue=9e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009386 [H]

Pfam domain/function: PF06295 DUF1043 [H]

EC number: NA

Molecular weight: Translated: 15324; Mature: 15324

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELEEYREELVSHFAR
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAELLDNMAHDYRQLYQHMAKSSNNLLPDSMADANPFRNRLEESEASNDQAPVQMPRDYS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHH
EGASGLLRGGAKRD
HHHHHHHCCCCCCC
>Mature Secondary Structure
MFMTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELEEYREELVSHFAR
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAELLDNMAHDYRQLYQHMAKSSNNLLPDSMADANPFRNRLEESEASNDQAPVQMPRDYS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHH
EGASGLLRGGAKRD
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]