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The map label for this gene is yhcC [H]

Identifier: 238896720

GI number: 238896720

Start: 4696068

End: 4697075

Strand: Reverse

Name: yhcC [H]

Synonym: KP1_4935

Alternate gene names: 238896720

Gene position: 4697075-4696068 (Counterclockwise)

Preceding gene: 238896723

Following gene: 238896717

Centisome position: 89.49

GC content: 59.13

Gene sequence:

>1008_bases
TTGATCTATGTCATCGCCGTCGGTGACGAAAAGTGGCAGGCTTGGCCCCCTTTGTTGAGGGCGGTCTATCAGATTATGCA
GTTACAGAAATTAGTCAATATGTTTGGTGGGGATCTTATGCGTCGCTATGGCGAAAAGGTCCATAAGCTAACGCTGCACG
GCGGTTTTAGCTGCCCAAACCGCGACGGCACGCTGGGCCGCGGCGGTTGCACTTTCTGTAACGTGGCATCGTTTGCCGAT
GAGGCGCAGCAGCATCGCTCTATCGCCGAACAGCTCGCTCATCAGGCGCAGCTCGTCAACCGGGCGAAGCGCTATCTGGC
CTATTTTCAGGCCTACACCAGCACCTTCGCTGAAGTGCAGGTGCTCCGTTCAATGTATCGTCAGGCCGTCAGTGCCGCAA
ATATCGTTGGCCTGTGCGTCGGCACCCGCCCGGACTGCGTTCCGCAGGCGGTCCTTGACCTGCTGAGTGAATACCATCAG
CAAGGGTATGAGGTATGGCTGGAGCTGGGGCTGCAAACTGCTCATGACAAGACCCTGCATCGCATTAACCGTGGACACGA
TTTCGCCTGTTATCAGCGTACCGCGCGCCTGGCGCGAGAGCGGGGGCTGAAAGTCTGTGCGCATCTGATCGTCGGTCTGC
CCGGAGAGAGCCAGGGGCATTGTCTGCAGACGCTGGAGCAGGTAGTGGCGACCGGCGTGGATGGGATCAAATTGCATCCA
CTGCATATTGTGAAAGGCAGCATTATGGCCAAAGCGTGGCAGGCCGGGCGTCTCGATGGCATTGAGCTGGAGGCGTATAC
CGTCACCGCTGGAGAGATGATCCGCCATACGCCGCCGGAGGTGATCTACCACCGTATTTCCGCCAGCGCCCGTCGGCCCA
CGCTGTTGGCGCCGCTGTGGTGTGAAAATCGCTGGACCGGCATGGTTGAACTGGATCGTTATCTGAATCAGCAGGGCGCT
CAGGGCTCGGCGCTGGGCCGTAGCTGGGTTGCTCCCCAGGCTGAGTGA

Upstream 100 bases:

>100_bases
TGCTAAGATAAAATATAAGGAAAACTCATCACCTGGGGGTTGAATGAAATTGCAGTAATCTTGATTGTTTATGCAATAGG
GTTGATCGCCGCGCTGACGA

Downstream 100 bases:

>100_bases
GAAGTACGAGCGTGATGTCCGGAACAATGCCGGACATCGCGCTCCTGCCATTTATGCCTGGCTGGCTTTCATCGTCACAC
GCGGAGTTTTGATCACGAAC

Product: putative enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MIYVIAVGDEKWQAWPPLLRAVYQIMQLQKLVNMFGGDLMRRYGEKVHKLTLHGGFSCPNRDGTLGRGGCTFCNVASFAD
EAQQHRSIAEQLAHQAQLVNRAKRYLAYFQAYTSTFAEVQVLRSMYRQAVSAANIVGLCVGTRPDCVPQAVLDLLSEYHQ
QGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTARLARERGLKVCAHLIVGLPGESQGHCLQTLEQVVATGVDGIKLHP
LHIVKGSIMAKAWQAGRLDGIELEAYTVTAGEMIRHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNQQGA
QGSALGRSWVAPQAE

Sequences:

>Translated_335_residues
MIYVIAVGDEKWQAWPPLLRAVYQIMQLQKLVNMFGGDLMRRYGEKVHKLTLHGGFSCPNRDGTLGRGGCTFCNVASFAD
EAQQHRSIAEQLAHQAQLVNRAKRYLAYFQAYTSTFAEVQVLRSMYRQAVSAANIVGLCVGTRPDCVPQAVLDLLSEYHQ
QGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTARLARERGLKVCAHLIVGLPGESQGHCLQTLEQVVATGVDGIKLHP
LHIVKGSIMAKAWQAGRLDGIELEAYTVTAGEMIRHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNQQGA
QGSALGRSWVAPQAE
>Mature_335_residues
MIYVIAVGDEKWQAWPPLLRAVYQIMQLQKLVNMFGGDLMRRYGEKVHKLTLHGGFSCPNRDGTLGRGGCTFCNVASFAD
EAQQHRSIAEQLAHQAQLVNRAKRYLAYFQAYTSTFAEVQVLRSMYRQAVSAANIVGLCVGTRPDCVPQAVLDLLSEYHQ
QGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTARLARERGLKVCAHLIVGLPGESQGHCLQTLEQVVATGVDGIKLHP
LHIVKGSIMAKAWQAGRLDGIELEAYTVTAGEMIRHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNQQGA
QGSALGRSWVAPQAE

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0486 [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=307, Percent_Identity=90.5537459283388, Blast_Score=585, Evalue=1e-168,
Organism=Saccharomyces cerevisiae, GI6325171, Length=170, Percent_Identity=22.9411764705882, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37458; Mature: 37458

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYVIAVGDEKWQAWPPLLRAVYQIMQLQKLVNMFGGDLMRRYGEKVHKLTLHGGFSCPN
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC
RDGTLGRGGCTFCNVASFADEAQQHRSIAEQLAHQAQLVNRAKRYLAYFQAYTSTFAEVQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLRSMYRQAVSAANIVGLCVGTRPDCVPQAVLDLLSEYHQQGYEVWLELGLQTAHDKTLH
HHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RINRGHDFACYQRTARLARERGLKVCAHLIVGLPGESQGHCLQTLEQVVATGVDGIKLHP
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEECH
LHIVKGSIMAKAWQAGRLDGIELEAYTVTAGEMIRHTPPEVIYHRISASARRPTLLAPLW
HHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHCCCHHHHHHHHHCCCCCCCEECEEC
CENRWTGMVELDRYLNQQGAQGSALGRSWVAPQAE
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIYVIAVGDEKWQAWPPLLRAVYQIMQLQKLVNMFGGDLMRRYGEKVHKLTLHGGFSCPN
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC
RDGTLGRGGCTFCNVASFADEAQQHRSIAEQLAHQAQLVNRAKRYLAYFQAYTSTFAEVQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLRSMYRQAVSAANIVGLCVGTRPDCVPQAVLDLLSEYHQQGYEVWLELGLQTAHDKTLH
HHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RINRGHDFACYQRTARLARERGLKVCAHLIVGLPGESQGHCLQTLEQVVATGVDGIKLHP
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEECH
LHIVKGSIMAKAWQAGRLDGIELEAYTVTAGEMIRHTPPEVIYHRISASARRPTLLAPLW
HHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHCCCHHHHHHHHHCCCCCCCEECEEC
CENRWTGMVELDRYLNQQGAQGSALGRSWVAPQAE
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]