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The map label for this gene is yhbV [H]

Identifier: 238896666

GI number: 238896666

Start: 4642520

End: 4643413

Strand: Direct

Name: yhbV [H]

Synonym: KP1_4874

Alternate gene names: 238896666

Gene position: 4642520-4643413 (Clockwise)

Preceding gene: 238896665

Following gene: 238896667

Centisome position: 88.45

GC content: 58.39

Gene sequence:

>894_bases
ATGGCAGTGAGAAACATGAAATATTCATTAGGGCCGGTGCTGTACTACTGGCCAAAAGAGACGCTGGAAGATTTTTACCA
GCAGGCGGCAAACTGCAGCGCCGACACCATTTATCTCGGCGAAGCGGTATGCAGCAAACGCCGCGCCACCAAAGTTGGCG
ACTGGATCGAAATGGCGAAAACGCTGGCCGCTAGCGGCAAGCAGGTGGTGCTCTCCACTCTCGCGCTGGTGCAGGCCTCT
TCTGAACTGGGCGAGCTGAAGCGCTATGTCGATAACGGCGAATTTCTGATTGAGGCCAGTGATTTGGGCGTGGTAAATCT
CTGCGCCGAACGCAAGCTACCATTCGTCGCCGGGCATGCGCTGAACTGCTACAACGCCGTTACCCTGCGCCTGCTGCGGA
AACAGGGCATGGTGCGCTGGTGCATGCCGGTGGAACTCTCCCGCGACTGGCTGGCTAATTTACTGACCCAGTGCGAAGAG
CTGGGTATCCGCAACCAGTTTGAAGTCGAAGTGCTGAGCTACGGCCATCTGCCGCTGGCTTATTCCGCGCGCTGCTTTAC
CGCCCGCTCGGAAGACCGGCCAAAGGACGAGTGCGAAACCTGCTGCATCAAGTACCCTACCGGGCGCAGCATGCTGTCGC
AGGAGAACCAGCAGGTGTTCGTGCTCAATGGTATTCAGACCATGAGCGGCTACGTCTATAACCTGGGCAATGAGCTGACC
TCCATGCACGGCCTGGTGGATATGGTGCGCCTGTCGCCGATGGGCAACGAGACCTTCGCCATGCTCGAGGCCTTCCGCGC
CAACGAAAACGGCGCTGCGCCGCTGGATCTCACCAGCAATAGCGATTGCAACGGCTACTGGAAACGATTGCCAGGACTGG
TGCTTCAGGCCTGA

Upstream 100 bases:

>100_bases
AAGCCGATCCGCAGAATTTCGTACCGCAGTCCGCCTGGATGGAGATCCTGGGCGCCATGTCCGAGGGGACACAAACTACC
CTTGGCGCTTATCACCGTAA

Downstream 100 bases:

>100_bases
TAAACCGCTCACTTTGTTAACAACAGTGCTCAGATTTTAATGCATTATTAAAGATGCAGCTTTTCTGGCTGGCGCGTCCA
GGATGCGCCAGGCTGGAAGA

Product: putative protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MAVRNMKYSLGPVLYYWPKETLEDFYQQAANCSADTIYLGEAVCSKRRATKVGDWIEMAKTLAASGKQVVLSTLALVQAS
SELGELKRYVDNGEFLIEASDLGVVNLCAERKLPFVAGHALNCYNAVTLRLLRKQGMVRWCMPVELSRDWLANLLTQCEE
LGIRNQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPTGRSMLSQENQQVFVLNGIQTMSGYVYNLGNELT
SMHGLVDMVRLSPMGNETFAMLEAFRANENGAAPLDLTSNSDCNGYWKRLPGLVLQA

Sequences:

>Translated_297_residues
MAVRNMKYSLGPVLYYWPKETLEDFYQQAANCSADTIYLGEAVCSKRRATKVGDWIEMAKTLAASGKQVVLSTLALVQAS
SELGELKRYVDNGEFLIEASDLGVVNLCAERKLPFVAGHALNCYNAVTLRLLRKQGMVRWCMPVELSRDWLANLLTQCEE
LGIRNQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPTGRSMLSQENQQVFVLNGIQTMSGYVYNLGNELT
SMHGLVDMVRLSPMGNETFAMLEAFRANENGAAPLDLTSNSDCNGYWKRLPGLVLQA
>Mature_296_residues
AVRNMKYSLGPVLYYWPKETLEDFYQQAANCSADTIYLGEAVCSKRRATKVGDWIEMAKTLAASGKQVVLSTLALVQASS
ELGELKRYVDNGEFLIEASDLGVVNLCAERKLPFVAGHALNCYNAVTLRLLRKQGMVRWCMPVELSRDWLANLLTQCEEL
GIRNQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPTGRSMLSQENQQVFVLNGIQTMSGYVYNLGNELTS
MHGLVDMVRLSPMGNETFAMLEAFRANENGAAPLDLTSNSDCNGYWKRLPGLVLQA

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082220, Length=292, Percent_Identity=88.6986301369863, Blast_Score=548, Evalue=1e-157,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 33204; Mature: 33073

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVRNMKYSLGPVLYYWPKETLEDFYQQAANCSADTIYLGEAVCSKRRATKVGDWIEMAK
CCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHH
TLAASGKQVVLSTLALVQASSELGELKRYVDNGEFLIEASDLGVVNLCAERKLPFVAGHA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHHCCCCEEECCH
LNCYNAVTLRLLRKQGMVRWCMPVELSRDWLANLLTQCEELGIRNQFEVEVLSYGHLPLA
HHHHHHHHHHHHHHCCCEEEECCHHCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCE
YSARCFTARSEDRPKDECETCCIKYPTGRSMLSQENQQVFVLNGIQTMSGYVYNLGNELT
ECCEEEECCCCCCCHHHHHHEEEECCCCHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHH
SMHGLVDMVRLSPMGNETFAMLEAFRANENGAAPLDLTSNSDCNGYWKRLPGLVLQA
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHCCCCEECC
>Mature Secondary Structure 
AVRNMKYSLGPVLYYWPKETLEDFYQQAANCSADTIYLGEAVCSKRRATKVGDWIEMAK
CCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHH
TLAASGKQVVLSTLALVQASSELGELKRYVDNGEFLIEASDLGVVNLCAERKLPFVAGHA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHHCCCCEEECCH
LNCYNAVTLRLLRKQGMVRWCMPVELSRDWLANLLTQCEELGIRNQFEVEVLSYGHLPLA
HHHHHHHHHHHHHHCCCEEEECCHHCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCE
YSARCFTARSEDRPKDECETCCIKYPTGRSMLSQENQQVFVLNGIQTMSGYVYNLGNELT
ECCEEEECCCCCCCHHHHHHEEEECCCCHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHH
SMHGLVDMVRLSPMGNETFAMLEAFRANENGAAPLDLTSNSDCNGYWKRLPGLVLQA
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]