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The map label for this gene is ygdB [H]

Identifier: 238896339

GI number: 238896339

Start: 4321167

End: 4321574

Strand: Reverse

Name: ygdB [H]

Synonym: KP1_4502

Alternate gene names: 238896339

Gene position: 4321574-4321167 (Counterclockwise)

Preceding gene: 238896340

Following gene: 238896338

Centisome position: 82.34

GC content: 66.42

Gene sequence:

>408_bases
GTGATCCGCCAGCGTGGAATGTCGTCGCTGCTGATGGTGCTCCTGTTGCTGACCCTCGGCTGCCTGTTACTCGAGGGGCT
TAACCTGCAGCAGCGGGCGCTGCTGGCGCAAACCGCCAGCGAAACGCAAGCGATCCGCGATACGGCGATAGCCCATTCCG
CGCTGCAGTGGGGAAAACAGCAGGTCTGGTCGGCGCAGGTGGCACTGGCCTGCCGGGAGCAGGCGCCGCAGGGCTGGCGC
GCCTGTCTGCGTATCTTCGGCGACGGTTCACTGGTGCTCAGCAGCGCCAGCGGCGAGGTGCAGGTCTGGCAGTCCGGCGA
GGTGCGCGGCGGGCAGGTGCGTTTTTCCGCCCACGGCTGGAGCGATTTTTGCCCGCTCAGGGAGGCGAGCTTATGTCAAA
TGCCCTGA

Upstream 100 bases:

>100_bases
CGGGCTTCGCGCCGGAGCTGAGCGTGACGCTGGCGGCGCGCTCCGCGCAACAGACGGGCCTGACGAGCGAGGTTGAGCAG
CGGGTGACGGGGTATAACCT

Downstream 100 bases:

>100_bases
AGCGTCAGCGGGGGTTTAGCCTGCCGGAGACCGTGCTGGCGATGGCGCTGATGGTGCTGACGGTCACCGCGCTGGGCGGC
TATCAGCGCGGAATGGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MIRQRGMSSLLMVLLLLTLGCLLLEGLNLQQRALLAQTASETQAIRDTAIAHSALQWGKQQVWSAQVALACREQAPQGWR
ACLRIFGDGSLVLSSASGEVQVWQSGEVRGGQVRFSAHGWSDFCPLREASLCQMP

Sequences:

>Translated_135_residues
MIRQRGMSSLLMVLLLLTLGCLLLEGLNLQQRALLAQTASETQAIRDTAIAHSALQWGKQQVWSAQVALACREQAPQGWR
ACLRIFGDGSLVLSSASGEVQVWQSGEVRGGQVRFSAHGWSDFCPLREASLCQMP
>Mature_135_residues
MIRQRGMSSLLMVLLLLTLGCLLLEGLNLQQRALLAQTASETQAIRDTAIAHSALQWGKQQVWSAQVALACREQAPQGWR
ACLRIFGDGSLVLSSASGEVQVWQSGEVRGGQVRFSAHGWSDFCPLREASLCQMP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082164, Length=135, Percent_Identity=44.4444444444444, Blast_Score=100, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019652 [H]

Pfam domain/function: PF10713 DUF2509 [H]

EC number: NA

Molecular weight: Translated: 14752; Mature: 14752

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRQRGMSSLLMVLLLLTLGCLLLEGLNLQQRALLAQTASETQAIRDTAIAHSALQWGKQ
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVWSAQVALACREQAPQGWRACLRIFGDGSLVLSSASGEVQVWQSGEVRGGQVRFSAHGW
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCEEEEECCCC
SDFCPLREASLCQMP
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRQRGMSSLLMVLLLLTLGCLLLEGLNLQQRALLAQTASETQAIRDTAIAHSALQWGKQ
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVWSAQVALACREQAPQGWRACLRIFGDGSLVLSSASGEVQVWQSGEVRGGQVRFSAHGW
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCEEEEECCCC
SDFCPLREASLCQMP
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3520484; 9278503 [H]