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The map label for this gene is pudB [H]

Identifier: 238896310

GI number: 238896310

Start: 4288195

End: 4288896

Strand: Direct

Name: pudB [H]

Synonym: KP1_4472

Alternate gene names: 238896310

Gene position: 4288195-4288896 (Clockwise)

Preceding gene: 238896309

Following gene: 238896311

Centisome position: 81.7

GC content: 62.25

Gene sequence:

>702_bases
ATGGCAGAGAAAAGCTGCAGCTTAACGGAATTTGTCGGGACCGCCATTGGCGACACCCTCGGGCTGGTCATCGCCAACGT
GGATGCCGCGTTGCTGGAGGCGATGAAGCTCGAAAAACGCTATCGCTCTATCGGCATCCTCGGCGCCCGCACCGGCGCCG
GGCCGCACATCATGGCCGCCGATGAAGCGGTCAAAGCCACCAACACCGAAGTGGTCAGCATTGAGCTTCCTCGCGACACC
AAAGGCGGCGCCGGCCATGGCTCGCTGATTGTGCTGGGCGGGAATGATGTTTCCGACGTCAAACGCGGGATTGAGGTCGC
GCTGAAAGAGCTGGACCGTACCTTCGGCGATGTCTACGGCAACGAAGCGGGTCATATTGAGCTGCAGTATACCGCGCGCG
CCAGTTATGCCCTGGAAAAAGCGTTCGGCGCCCCACTGGGCCGCGCCTGCGGCATTATCGTCGGCGCCCCGGCGTCCGTT
GGCGTGCTGATGGCCGATACCGCGCTGAAATCAGCCAACGTCGAGGTGGTGGCTTACAGCTCACCGGCCCACGGCACCAG
TTTCAGCAACGAAGCCATTCTGGTGATTTCCGGCGACTCTGGCGCGGTGCGCCAGGCGGTGATCTCCGCCCGGGAAATCG
GCAAAACCGTACTGGCGACGCTGGGCGCCGAACCGAAAAACGATCGCCCCTCCTACATTTAA

Upstream 100 bases:

>100_bases
TGAGCTGGTTGAACAGATCATGGCGCAAGTCATAGCCCGTGTAGCGACGCCAGAGCAGCAGGCGCTTCCCGATACCCCCC
ATCCCACAGGAGAGACGGCT

Downstream 100 bases:

>100_bases
TACCCGCGAGGCTGATTCATGAGATCGAAAAGATTTGAAGCACTGGCGAAACGCCCTGTGAATCAGGATGGTTTCGTTAA
GGAGTGGATTGAAGAGGGCT

Product: putative propanediol utilization protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MAEKSCSLTEFVGTAIGDTLGLVIANVDAALLEAMKLEKRYRSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDT
KGGAGHGSLIVLGGNDVSDVKRGIEVALKELDRTFGDVYGNEAGHIELQYTARASYALEKAFGAPLGRACGIIVGAPASV
GVLMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAVRQAVISAREIGKTVLATLGAEPKNDRPSYI

Sequences:

>Translated_233_residues
MAEKSCSLTEFVGTAIGDTLGLVIANVDAALLEAMKLEKRYRSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDT
KGGAGHGSLIVLGGNDVSDVKRGIEVALKELDRTFGDVYGNEAGHIELQYTARASYALEKAFGAPLGRACGIIVGAPASV
GVLMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAVRQAVISAREIGKTVLATLGAEPKNDRPSYI
>Mature_232_residues
AEKSCSLTEFVGTAIGDTLGLVIANVDAALLEAMKLEKRYRSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDTK
GGAGHGSLIVLGGNDVSDVKRGIEVALKELDRTFGDVYGNEAGHIELQYTARASYALEKAFGAPLGRACGIIVGAPASVG
VLMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAVRQAVISAREIGKTVLATLGAEPKNDRPSYI

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4816

COG function: function code E; Ethanolamine utilization protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EutL/PduB family [H]

Homologues:

Organism=Escherichia coli, GI1788780, Length=178, Percent_Identity=30.8988764044944, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009193
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 23968; Mature: 23836

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKSCSLTEFVGTAIGDTLGLVIANVDAALLEAMKLEKRYRSIGILGARTGAGPHIMAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEC
DEAVKATNTEVVSIELPRDTKGGAGHGSLIVLGGNDVSDVKRGIEVALKELDRTFGDVYG
CCHHHCCCCEEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
NEAGHIELQYTARASYALEKAFGAPLGRACGIIVGAPASVGVLMADTALKSANVEVVAYS
CCCCEEEEEEECCHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEHHHHCCCCEEEEEEC
SPAHGTSFSNEAILVISGDSGAVRQAVISAREIGKTVLATLGAEPKNDRPSYI
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AEKSCSLTEFVGTAIGDTLGLVIANVDAALLEAMKLEKRYRSIGILGARTGAGPHIMAA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEC
DEAVKATNTEVVSIELPRDTKGGAGHGSLIVLGGNDVSDVKRGIEVALKELDRTFGDVYG
CCHHHCCCCEEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
NEAGHIELQYTARASYALEKAFGAPLGRACGIIVGAPASVGVLMADTALKSANVEVVAYS
CCCCEEEEEEECCHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEHHHHCCCCEEEEEEC
SPAHGTSFSNEAILVISGDSGAVRQAVISAREIGKTVLATLGAEPKNDRPSYI
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8071226; 9352910; 11677609 [H]