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The map label for this gene is pduA [H]

Identifier: 238896309

GI number: 238896309

Start: 4287803

End: 4288087

Strand: Direct

Name: pduA [H]

Synonym: KP1_4471

Alternate gene names: 238896309

Gene position: 4287803-4288087 (Clockwise)

Preceding gene: 238896283

Following gene: 238896310

Centisome position: 81.7

GC content: 55.44

Gene sequence:

>285_bases
ATGCAACAAGAAGCATTAGGAATGGTAGAAACCAAAGGCTTAACCGCAGCCATAGAGGCCGCTGACGCAATGGTTAAGTC
GGCCAACGTTTTATTAGTTGGCTATGAAAGGATCGGTTCAGGCCTGGTGACCGTCATCGTGCGTGGCGACGTGGGGGCAG
TTAAAGCCGCCACCGACGCCGGTGCCGCCGCAGCCCGCCACGTGGGCGAAGTGAAAGCCGTACACGTCATTCCCCGCCCC
CATACCGATGTTGAAAAAATCTTACCGAAGGGGAATAGCCAATGA

Upstream 100 bases:

>100_bases
AAAAACCACTATTTTTTCGCTCTCCACCATCAACTCAGCCATTCTTTTTCGCCGCTCCGCCATATAGTTCCCTCACTGGC
ACATATCCTGCGAGGTCTTT

Downstream 100 bases:

>100_bases
GCAGCAATGAGCTGGTTGAACAGATCATGGCGCAAGTCATAGCCCGTGTAGCGACGCCAGAGCAGCAGGCGCTTCCCGAT
ACCCCCCATCCCACAGGAGA

Product: putative propanediol utilization protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYERIGSGLVTVIVRGDVGAVKAATDAGAAAARHVGEVKAVHVIPRP
HTDVEKILPKGNSQ

Sequences:

>Translated_94_residues
MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYERIGSGLVTVIVRGDVGAVKAATDAGAAAARHVGEVKAVHVIPRP
HTDVEKILPKGNSQ
>Mature_94_residues
MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYERIGSGLVTVIVRGDVGAVKAATDAGAAAARHVGEVKAVHVIPRP
HTDVEKILPKGNSQ

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=94, Percent_Identity=64.8936170212766, Blast_Score=100, Evalue=1e-23,
Organism=Escherichia coli, GI87082105, Length=90, Percent_Identity=45.5555555555556, Blast_Score=62, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 9626; Mature: 9626

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYERIGSGLVTVIVRGDVGAVKAATDA
CCCCCCCEEECCCCHHHHHHHHHHHCCCCEEEEEHHHHCCCEEEEEEECCCCCEEECCCC
GAAAARHVGEVKAVHVIPRPHTDVEKILPKGNSQ
CHHHHHHCCCEEEEEECCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYERIGSGLVTVIVRGDVGAVKAATDA
CCCCCCCEEECCCCHHHHHHHHHHHCCCCEEEEEHHHHCCCEEEEEEECCCCCEEECCCC
GAAAARHVGEVKAVHVIPRPHTDVEKILPKGNSQ
CHHHHHHCCCEEEEEECCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]