Click here to switch to the map view.

The map label for this gene is garK [H]

Identifier: 238896248

GI number: 238896248

Start: 4225375

End: 4226514

Strand: Reverse

Name: garK [H]

Synonym: KP1_4401

Alternate gene names: 238896248

Gene position: 4226514-4225375 (Counterclockwise)

Preceding gene: 238896249

Following gene: 238896246

Centisome position: 80.53

GC content: 64.3

Gene sequence:

>1140_bases
ATGAAAATAGTGATCGCACCGGATTCCTGGAAGGAGAGCCTGAGCGCGCTGGAAGTGGCCAGTGCGATAGAGCAAGGCTT
TCGCGAGATTTATCCTGACGCCGAGTACGTCAAGCTGCCGGTTGCCGATGGTGGGGAAGGGACGGTGGAAGCCATGGTGG
CGGCGACCGGCGGGCTTCTGGTTCCGCTGACGGTCACCGGGCCGCTGGGCGAGCCGGTTGAGGCATTTTACGGGCTGTCC
GGCGATCGCCAGTGCGCCTTTATCGAAATGGCGGCGGCCAGCGGCCTGGAGAGCGTCCCGCCGGCGCAGCGTAACCCGCT
GCTGACCACTTCCTGGGGTACCGGGGAGCTTATCCGCCATGCGCTGGACGCCGGGGTAAGACAGATCATTATTGGTATTG
GCGGCAGTGCGACCAATGACGGCGGCGCCGGGATGGCGCAGGCGCTGGGGGCGAAACTGCTGACCGCCGAGGGCCAGCAA
ATTGCCTCCGGGGGCGGCGCGCTGGAGACGCTGGCGCTCATCGATCTCAGCGAACTCGATTCGCGGCTGGCAGATTGCCG
GATTGACGTTGCCTGCGACGTCACCAACCCGTTGACCGGCCCGCAGGGCGCCAGCGCGGTGTTCGGCCCGCAAAAAGGGG
CGACGGCGCAGATGATCGACCGGCTCGACAGCGGCCTGCGGCACTATGCCCGGATTATCGCCCGCGATTTAGATATCGAC
GTGCTGAGCCTTGAGGGCGGCGGCGCGGCGGGCGGCATGGGTGCGGCGCTGTATGCGTTCTGTGGTGCTCAGTTGCGTCC
GGGCATTGAGATTGTCACCGATGCGCTACAGCTGGCTGAGCGGGTGGCGGATGCCGATTTAGTGATCACCGGCGAAGGGC
GTATCGATAGCCAGACGATCCACGGCAAAGTGCCGGTGGGGGTGGCGAGGGTGGCGAAGCGTTTTAACGTCCCGGTGATC
GGGATTGCCGGCAGTCTTACCGCCGATGTTGGCGTCGTGCATCAGCACGGGCTGGATGCGGTATTCAGCGTGTTGTATAC
CATCTGTACCCTTGATGAAGCGTTGGCCAATGCCGCCGCCAACCTGCGAATGACGGCGCGTAACGTAGCCGCGGTTTTGC
AGATGGGCGACAGGCGGTAA

Upstream 100 bases:

>100_bases
CAACAAGCGTCCATGCATGGTGCGCTAAAAGTCCGCCGGCCTCTGCGGGGGCCGGCATTGCGCGACAGCGCCAGGGGTTG
GCTCAGAGTAAGGACAGCAG

Downstream 100 bases:

>100_bases
CCCGGCTGGCGCAGTGGTATTTGTAGCCCGGATAAGGTGCGTAGCACCGCGATCCGGGAACCATCCCCGGTGGCGCTTAC
GCTTACCGGGGCTACCAACC

Product: glycerate kinase I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKIVIAPDSWKESLSALEVASAIEQGFREIYPDAEYVKLPVADGGEGTVEAMVAATGGLLVPLTVTGPLGEPVEAFYGLS
GDRQCAFIEMAAASGLESVPPAQRNPLLTTSWGTGELIRHALDAGVRQIIIGIGGSATNDGGAGMAQALGAKLLTAEGQQ
IASGGGALETLALIDLSELDSRLADCRIDVACDVTNPLTGPQGASAVFGPQKGATAQMIDRLDSGLRHYARIIARDLDID
VLSLEGGGAAGGMGAALYAFCGAQLRPGIEIVTDALQLAERVADADLVITGEGRIDSQTIHGKVPVGVARVAKRFNVPVI
GIAGSLTADVGVVHQHGLDAVFSVLYTICTLDEALANAAANLRMTARNVAAVLQMGDRR

Sequences:

>Translated_379_residues
MKIVIAPDSWKESLSALEVASAIEQGFREIYPDAEYVKLPVADGGEGTVEAMVAATGGLLVPLTVTGPLGEPVEAFYGLS
GDRQCAFIEMAAASGLESVPPAQRNPLLTTSWGTGELIRHALDAGVRQIIIGIGGSATNDGGAGMAQALGAKLLTAEGQQ
IASGGGALETLALIDLSELDSRLADCRIDVACDVTNPLTGPQGASAVFGPQKGATAQMIDRLDSGLRHYARIIARDLDID
VLSLEGGGAAGGMGAALYAFCGAQLRPGIEIVTDALQLAERVADADLVITGEGRIDSQTIHGKVPVGVARVAKRFNVPVI
GIAGSLTADVGVVHQHGLDAVFSVLYTICTLDEALANAAANLRMTARNVAAVLQMGDRR
>Mature_379_residues
MKIVIAPDSWKESLSALEVASAIEQGFREIYPDAEYVKLPVADGGEGTVEAMVAATGGLLVPLTVTGPLGEPVEAFYGLS
GDRQCAFIEMAAASGLESVPPAQRNPLLTTSWGTGELIRHALDAGVRQIIIGIGGSATNDGGAGMAQALGAKLLTAEGQQ
IASGGGALETLALIDLSELDSRLADCRIDVACDVTNPLTGPQGASAVFGPQKGATAQMIDRLDSGLRHYARIIARDLDID
VLSLEGGGAAGGMGAALYAFCGAQLRPGIEIVTDALQLAERVADADLVITGEGRIDSQTIHGKVPVGVARVAKRFNVPVI
GIAGSLTADVGVVHQHGLDAVFSVLYTICTLDEALANAAANLRMTARNVAAVLQMGDRR

Specific function: Unknown

COG id: COG1929

COG function: function code G; Glycerate kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerate kinase type-1 family [H]

Homologues:

Organism=Escherichia coli, GI145693185, Length=379, Percent_Identity=67.8100263852243, Blast_Score=467, Evalue=1e-133,
Organism=Escherichia coli, GI1786724, Length=376, Percent_Identity=61.436170212766, Blast_Score=429, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018193
- InterPro:   IPR004381 [H]

Pfam domain/function: PF02595 Gly_kinase [H]

EC number: =2.7.1.31 [H]

Molecular weight: Translated: 38945; Mature: 38945

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVIAPDSWKESLSALEVASAIEQGFREIYPDAEYVKLPVADGGEGTVEAMVAATGGLL
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHEECCCCEE
VPLTVTGPLGEPVEAFYGLSGDRQCAFIEMAAASGLESVPPAQRNPLLTTSWGTGELIRH
EEEEEECCCCCHHHHHHCCCCCCCEEEEEEHHHCCCCCCCCCCCCCEEEECCCHHHHHHH
ALDAGVRQIIIGIGGSATNDGGAGMAQALGAKLLTAEGQQIASGGGALETLALIDLSELD
HHHHHHHEEEEECCCCCCCCCCCHHHHHHCHHHHHCCCCHHHCCCCHHHHHHHHHHHHHH
SRLADCRIDVACDVTNPLTGPQGASAVFGPQKGATAQMIDRLDSGLRHYARIIARDLDID
HHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEE
VLSLEGGGAAGGMGAALYAFCGAQLRPGIEIVTDALQLAERVADADLVITGEGRIDSQTI
EEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEE
HGKVPVGVARVAKRFNVPVIGIAGSLTADVGVVHQHGLDAVFSVLYTICTLDEALANAAA
CCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
NLRMTARNVAAVLQMGDRR
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKIVIAPDSWKESLSALEVASAIEQGFREIYPDAEYVKLPVADGGEGTVEAMVAATGGLL
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHEECCCCEE
VPLTVTGPLGEPVEAFYGLSGDRQCAFIEMAAASGLESVPPAQRNPLLTTSWGTGELIRH
EEEEEECCCCCHHHHHHCCCCCCCEEEEEEHHHCCCCCCCCCCCCCEEEECCCHHHHHHH
ALDAGVRQIIIGIGGSATNDGGAGMAQALGAKLLTAEGQQIASGGGALETLALIDLSELD
HHHHHHHEEEEECCCCCCCCCCCHHHHHHCHHHHHCCCCHHHCCCCHHHHHHHHHHHHHH
SRLADCRIDVACDVTNPLTGPQGASAVFGPQKGATAQMIDRLDSGLRHYARIIARDLDID
HHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEE
VLSLEGGGAAGGMGAALYAFCGAQLRPGIEIVTDALQLAERVADADLVITGEGRIDSQTI
EEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEE
HGKVPVGVARVAKRFNVPVIGIAGSLTADVGVVHQHGLDAVFSVLYTICTLDEALANAAA
CCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
NLRMTARNVAAVLQMGDRR
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1705543; 9278503 [H]