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The map label for this gene is yfdV [H]

Identifier: 238896204

GI number: 238896204

Start: 4176420

End: 4177361

Strand: Direct

Name: yfdV [H]

Synonym: KP1_4353

Alternate gene names: 238896204

Gene position: 4176420-4177361 (Clockwise)

Preceding gene: 238896201

Following gene: 238896205

Centisome position: 79.57

GC content: 52.34

Gene sequence:

>942_bases
ATGACACAGAACAATATTCTATTAATTTCAGGCGCTATATTACCGGTCATCATTACCGTCATCATCGGCTATATTAGCGG
TAAACGAAAAGACTTTAACTGGCAGCAGGCAGGAGACATCAATAAAATTGTGATGCTCTACGCATTGCCGCTAAGTATTT
TCAGCAATATGGTGATGACGCCGCGACACATCGTCATGACCATGGGCCCGGTCGCCGTGGCTATCATCCTGGCGCTGATT
CTCAGCTTCGTCATTCCCTTACTGGTCGCCCGCTATCTGTTTCGACGCGACCTCGCCCTCAGTACGCTGCAGGCGCTGGC
CATCGGCTCGCCGGCAGTCCCGTTTATCGGCACCTCAGTGCTGGCCTTTTTATTTGGCACCGTCAGCGCGTCGCTGATCA
CCGTGTCCAGCATCACGCAAAACGTCTTCCAGCTGCCGCTGGTGATGATACTGATGTCGGTCGCCACCGGCGATAAGAGC
CAGCATATTTCCTTTGGCGCACGGGTGGTGAACGCCATTAAACAACCCGTGGTCTGGTCGCCGGTGATCGCCCTGATCAT
CGTGCTGGCGGATATCCATATTCCGCAGACTATCTCGATGTCGCTGGGTCTGCTGGGCAAAGCCTCTGGCGGGCTGGCGC
TGTTTGCCGCCGGGATCGTGCTCTATACGCGCAGCATTGTTATCACCACCGCTACCATTATCACCGTTATCGCCCGCAAT
ATTCTGGTCCCCGGCGCCTGCTATCTCATTTTATTAAAAATGGGCTTCAGCATGGAGCAAATAAAGGAAGTCGTATTGAC
GATGGCTATCCCGGTAGGCTCCATCGCGATAATTATTGCTATGCAGTATAAAACCGGCGAGCAGGAAATGGCCTCGACGA
TGGCGCTGAGTATTATTGCCTCCATCATTACGATGGGCGGATTTATTTTCTTAACCTTTTAA

Upstream 100 bases:

>100_bases
AATCACCGGAACGCATACTTCAAAAGGATTTATTTATCTCACCACCCACGGCAAAACACATTTCTGATCCGAAGATAATT
TATAATGAGAATATATCACC

Downstream 100 bases:

>100_bases
TTACCGCGATTACACCGCGTGAATACGGAGAGAATATGGCCTCTATCACATTATCGGCTGCTGAACTGTTACTGCATCGG
CTACAGGCGCTGGACGTGGC

Product: putative receptor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MTQNNILLISGAILPVIITVIIGYISGKRKDFNWQQAGDINKIVMLYALPLSIFSNMVMTPRHIVMTMGPVAVAIILALI
LSFVIPLLVARYLFRRDLALSTLQALAIGSPAVPFIGTSVLAFLFGTVSASLITVSSITQNVFQLPLVMILMSVATGDKS
QHISFGARVVNAIKQPVVWSPVIALIIVLADIHIPQTISMSLGLLGKASGGLALFAAGIVLYTRSIVITTATIITVIARN
ILVPGACYLILLKMGFSMEQIKEVVLTMAIPVGSIAIIIAMQYKTGEQEMASTMALSIIASIITMGGFIFLTF

Sequences:

>Translated_313_residues
MTQNNILLISGAILPVIITVIIGYISGKRKDFNWQQAGDINKIVMLYALPLSIFSNMVMTPRHIVMTMGPVAVAIILALI
LSFVIPLLVARYLFRRDLALSTLQALAIGSPAVPFIGTSVLAFLFGTVSASLITVSSITQNVFQLPLVMILMSVATGDKS
QHISFGARVVNAIKQPVVWSPVIALIIVLADIHIPQTISMSLGLLGKASGGLALFAAGIVLYTRSIVITTATIITVIARN
ILVPGACYLILLKMGFSMEQIKEVVLTMAIPVGSIAIIIAMQYKTGEQEMASTMALSIIASIITMGGFIFLTF
>Mature_312_residues
TQNNILLISGAILPVIITVIIGYISGKRKDFNWQQAGDINKIVMLYALPLSIFSNMVMTPRHIVMTMGPVAVAIILALIL
SFVIPLLVARYLFRRDLALSTLQALAIGSPAVPFIGTSVLAFLFGTVSASLITVSSITQNVFQLPLVMILMSVATGDKSQ
HISFGARVVNAIKQPVVWSPVIALIIVLADIHIPQTISMSLGLLGKASGGLALFAAGIVLYTRSIVITTATIITVIARNI
LVPGACYLILLKMGFSMEQIKEVVLTMAIPVGSIAIIIAMQYKTGEQEMASTMALSIIASIITMGGFIFLTF

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

Organism=Escherichia coli, GI1788715, Length=304, Percent_Identity=28.6184210526316, Blast_Score=131, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 33447; Mature: 33316

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQNNILLISGAILPVIITVIIGYISGKRKDFNWQQAGDINKIVMLYALPLSIFSNMVMT
CCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCC
PRHIVMTMGPVAVAIILALILSFVIPLLVARYLFRRDLALSTLQALAIGSPAVPFIGTSV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LAFLFGTVSASLITVSSITQNVFQLPLVMILMSVATGDKSQHISFGARVVNAIKQPVVWS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH
PVIALIIVLADIHIPQTISMSLGLLGKASGGLALFAAGIVLYTRSIVITTATIITVIARN
HHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILVPGACYLILLKMGFSMEQIKEVVLTMAIPVGSIAIIIAMQYKTGEQEMASTMALSIIA
HCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHH
SIITMGGFIFLTF
HHHHHCCEEEEEC
>Mature Secondary Structure 
TQNNILLISGAILPVIITVIIGYISGKRKDFNWQQAGDINKIVMLYALPLSIFSNMVMT
CCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCC
PRHIVMTMGPVAVAIILALILSFVIPLLVARYLFRRDLALSTLQALAIGSPAVPFIGTSV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LAFLFGTVSASLITVSSITQNVFQLPLVMILMSVATGDKSQHISFGARVVNAIKQPVVWS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH
PVIALIIVLADIHIPQTISMSLGLLGKASGGLALFAAGIVLYTRSIVITTATIITVIARN
HHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILVPGACYLILLKMGFSMEQIKEVVLTMAIPVGSIAIIIAMQYKTGEQEMASTMALSIIA
HCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHH
SIITMGGFIFLTF
HHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]