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The map label for this gene is scrY [H]

Identifier: 238896191

GI number: 238896191

Start: 4164249

End: 4165586

Strand: Reverse

Name: scrY [H]

Synonym: KP1_4339

Alternate gene names: 238896191

Gene position: 4165586-4164249 (Counterclockwise)

Preceding gene: 238896192

Following gene: 238896190

Centisome position: 79.37

GC content: 57.47

Gene sequence:

>1338_bases
ATGATAAAGCTGAAACACTCAATACCTCTGGCTCTCCTCTCGCTGGCAGGGGCCAGCAGCCCGGCCTGCGCCGATCCGAA
GTATGATTTTGCGCTGCATGGCTATATCCGCTCCGGGATCCTGGCGAACTCCGATGGCAACCGCGCGGACTCCGTCGGCC
TGATGCCGGACGGCAAGTGGCGACTGGGCAACGAAGAAGACACCAAGATCGAACTGATCCCGACCGTGACGCTGACGGCG
GACAGCGGCGTGGTGGCGAAAGTGCAGGCCAACCTCACTCACCAGTCGAAATGCACCTCCGACTGGAACTGTCAGGATGA
CGATGGCCATGACGTACAGTTTCGTGAAGGGTTCGCCGAGCTGAGCAATCTGGATTTTGCGCCAGAGATGACCTTCTGGG
CCGGTAAGCGCTATAGCAGCTCCAACACCTCCAGCCATCAGTTCGACTGGGAGTACATTCAGTACAACGGCACCGGCGGC
GGCTTCGACAACATGGATCTCGGCTTCGCCCGCTTCGACGCCGGGGTGTACGCCTTTTCACCCACCGATGAAACCAAAGC
CTACCCGGTGGATAAGGGAGATCAGGGCTACCCGGATGACTATTCCCTCAACCTGTGGCTGAAAAAGATCGCGGGGACAG
GCTTCGATCTGGAGCTGATCGGCCACCACATGAACCGTAACGAAAACCATCCAACTTCCGCCGAGAAGGGCTATGGCGTG
ACCGGTATTTATAACTTTGACGGCTTCTATGGTCTGACCGGAGGATACTCCCGCCTCGCATTGCAGTACGGGAAAGGGCT
GGCGGCGGGTGACTCGCTGGGTAAAAACGGCTGGGGCTGGGCCAACCTGGAAAACACCCAGTCCTGGCGAGTGGTGCTGG
ATAGCGTGGCCTCGATGGGCGACCTGGAGATCTCGACCTTCGCTTTCTGGCAGAAAGATAAAAACTACCGCTGGTGGACA
GAAGATGAAAATGGCTGGGGACGCTCGATGTGGGTCGCTGGTATCCGCCCTTATCATCAGATCACCCGCAACTTTGCCAT
GCAGTACGAGCTGGGCTACGAATACCTGGATGACAAAAACTACAAAGGAGTAAACGGCAAAGGCAAAGGCGGCCTGACCA
AAGTCACCGTTGCGCCAACGCTGACCTTTGACTCCGGTTTCTGGGCGCGTCCGCAGCTGCGCTTCTTCGTCACCTACGCG
AAGTGGGATAAAGGTGTCTCCGATGCATTAGACGGTAACTACAACTGGGATACCAATACCATCACCGCCGGCGGGTATTC
CCGCAGTGGCTCTACCGACACCGTTAACTTCGGCGTACAGGCCGAGGTCTGGTTCTAA

Upstream 100 bases:

>100_bases
AAAGCGCTTTCCGTAAGTGGATGTACATTTCCGTTTTTGATCCGTAAATTTCCCCTCCGTTATCGGTTCGTGTTAACAAA
CATAACGTGGGAAAAAAATA

Downstream 100 bases:

>100_bases
GGAGAGACAACGATGAAGCCGATGAAAAACCTGCTGCTGATGGGGCTGCTGTCCGCGCTGGCGGCCGGCGGGGCGCTGGC
CGCCGAGCGCTCGCACTTTA

Product: maltoporin precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MIKLKHSIPLALLSLAGASSPACADPKYDFALHGYIRSGILANSDGNRADSVGLMPDGKWRLGNEEDTKIELIPTVTLTA
DSGVVAKVQANLTHQSKCTSDWNCQDDDGHDVQFREGFAELSNLDFAPEMTFWAGKRYSSSNTSSHQFDWEYIQYNGTGG
GFDNMDLGFARFDAGVYAFSPTDETKAYPVDKGDQGYPDDYSLNLWLKKIAGTGFDLELIGHHMNRNENHPTSAEKGYGV
TGIYNFDGFYGLTGGYSRLALQYGKGLAAGDSLGKNGWGWANLENTQSWRVVLDSVASMGDLEISTFAFWQKDKNYRWWT
EDENGWGRSMWVAGIRPYHQITRNFAMQYELGYEYLDDKNYKGVNGKGKGGLTKVTVAPTLTFDSGFWARPQLRFFVTYA
KWDKGVSDALDGNYNWDTNTITAGGYSRSGSTDTVNFGVQAEVWF

Sequences:

>Translated_445_residues
MIKLKHSIPLALLSLAGASSPACADPKYDFALHGYIRSGILANSDGNRADSVGLMPDGKWRLGNEEDTKIELIPTVTLTA
DSGVVAKVQANLTHQSKCTSDWNCQDDDGHDVQFREGFAELSNLDFAPEMTFWAGKRYSSSNTSSHQFDWEYIQYNGTGG
GFDNMDLGFARFDAGVYAFSPTDETKAYPVDKGDQGYPDDYSLNLWLKKIAGTGFDLELIGHHMNRNENHPTSAEKGYGV
TGIYNFDGFYGLTGGYSRLALQYGKGLAAGDSLGKNGWGWANLENTQSWRVVLDSVASMGDLEISTFAFWQKDKNYRWWT
EDENGWGRSMWVAGIRPYHQITRNFAMQYELGYEYLDDKNYKGVNGKGKGGLTKVTVAPTLTFDSGFWARPQLRFFVTYA
KWDKGVSDALDGNYNWDTNTITAGGYSRSGSTDTVNFGVQAEVWF
>Mature_445_residues
MIKLKHSIPLALLSLAGASSPACADPKYDFALHGYIRSGILANSDGNRADSVGLMPDGKWRLGNEEDTKIELIPTVTLTA
DSGVVAKVQANLTHQSKCTSDWNCQDDDGHDVQFREGFAELSNLDFAPEMTFWAGKRYSSSNTSSHQFDWEYIQYNGTGG
GFDNMDLGFARFDAGVYAFSPTDETKAYPVDKGDQGYPDDYSLNLWLKKIAGTGFDLELIGHHMNRNENHPTSAEKGYGV
TGIYNFDGFYGLTGGYSRLALQYGKGLAAGDSLGKNGWGWANLENTQSWRVVLDSVASMGDLEISTFAFWQKDKNYRWWT
EDENGWGRSMWVAGIRPYHQITRNFAMQYELGYEYLDDKNYKGVNGKGKGGLTKVTVAPTLTFDSGFWARPQLRFFVTYA
KWDKGVSDALDGNYNWDTNTITAGGYSRSGSTDTVNFGVQAEVWF

Specific function: Porin for sucrose uptake [H]

COG id: COG4580

COG function: function code G; Maltoporin (phage lambda and maltose receptor)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the porin LamB (TC 1.B.3) family [H]

Homologues:

Organism=Escherichia coli, GI1790469, Length=468, Percent_Identity=27.1367521367521, Blast_Score=107, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003192
- ProDom:   PD008788 [H]

Pfam domain/function: PF02264 LamB [H]

EC number: NA

Molecular weight: Translated: 49477; Mature: 49477

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLKHSIPLALLSLAGASSPACADPKYDFALHGYIRSGILANSDGNRADSVGLMPDGKW
CEEECCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEHHCCEEECCCCCCCCEECCCCCCCE
RLGNEEDTKIELIPTVTLTADSGVVAKVQANLTHQSKCTSDWNCQDDDGHDVQFREGFAE
ECCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEHHHHHHHH
LSNLDFAPEMTFWAGKRYSSSNTSSHQFDWEYIQYNGTGGGFDNMDLGFARFDAGVYAFS
HHCCCCCCCCEEECCCEECCCCCCCCEECEEEEEECCCCCCCCCCCCCEEEECCCEEEEC
PTDETKAYPVDKGDQGYPDDYSLNLWLKKIAGTGFDLELIGHHMNRNENHPTSAEKGYGV
CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCE
TGIYNFDGFYGLTGGYSRLALQYGKGLAAGDSLGKNGWGWANLENTQSWRVVLDSVASMG
EEEECCCCCEECCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
DLEISTFAFWQKDKNYRWWTEDENGWGRSMWVAGIRPYHQITRNFAMQYELGYEYLDDKN
CCEEEEEEEEECCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHEEEEECCCEEECCCC
YKGVNGKGKGGLTKVTVAPTLTFDSGFWARPQLRFFVTYAKWDKGVSDALDGNYNWDTNT
CCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHCCCCCCCCCCE
ITAGGYSRSGSTDTVNFGVQAEVWF
EEECCCCCCCCCCEEEECEEEEEEC
>Mature Secondary Structure
MIKLKHSIPLALLSLAGASSPACADPKYDFALHGYIRSGILANSDGNRADSVGLMPDGKW
CEEECCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEHHCCEEECCCCCCCCEECCCCCCCE
RLGNEEDTKIELIPTVTLTADSGVVAKVQANLTHQSKCTSDWNCQDDDGHDVQFREGFAE
ECCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEHHHHHHHH
LSNLDFAPEMTFWAGKRYSSSNTSSHQFDWEYIQYNGTGGGFDNMDLGFARFDAGVYAFS
HHCCCCCCCCEEECCCEECCCCCCCCEECEEEEEECCCCCCCCCCCCCEEEECCCEEEEC
PTDETKAYPVDKGDQGYPDDYSLNLWLKKIAGTGFDLELIGHHMNRNENHPTSAEKGYGV
CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCE
TGIYNFDGFYGLTGGYSRLALQYGKGLAAGDSLGKNGWGWANLENTQSWRVVLDSVASMG
EEEECCCCCEECCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
DLEISTFAFWQKDKNYRWWTEDENGWGRSMWVAGIRPYHQITRNFAMQYELGYEYLDDKN
CCEEEEEEEEECCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHEEEEECCCEEECCCC
YKGVNGKGKGGLTKVTVAPTLTFDSGFWARPQLRFFVTYAKWDKGVSDALDGNYNWDTNT
CCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHCCCCCCCCCCE
ITAGGYSRSGSTDTVNFGVQAEVWF
EEECCCCCCCCCCEEEECEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1846143; 1649946; 9437428 [H]