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The map label for this gene is hycG [H]

Identifier: 238896176

GI number: 238896176

Start: 4147475

End: 4148242

Strand: Reverse

Name: hycG [H]

Synonym: KP1_4322

Alternate gene names: 238896176

Gene position: 4148242-4147475 (Counterclockwise)

Preceding gene: 238896177

Following gene: 238896175

Centisome position: 79.04

GC content: 62.24

Gene sequence:

>768_bases
ATGAGTACTTTACTTGGCCCGCGCGATGAAAACGGCATTCCCGTGCCGATGACGGTGGATGAATCCATCGCCAGCATGAA
GGCCTCGCTACTGAAGAAGATTAAACGTTCGGCCTACGTCTACCGCGTCGACTGTGGCGGCTGCAACGGCTGCGAAATCG
AAATTTTCGCCACCCTTTCGCCGCTGTTCGACGCTGAACGCTTCGGGATTAAGGTGGTGCCTTCGCCGCGCCATGCCGAT
ATTCTGTTGTTTACCGGGGCAGTGACTCGCGCGATGCGCTCCCCGGCGCTGCGCGCCTGGCAGTCGGCGCCGGATCCGAA
GATCTGTATCTCCTACGGCGCCTGCGGCAACAGCGGCGGCATCTTCCACGACCTGTACTGCGTCTGGGGCGGTACCGATA
AAATCGTACCGGTCGACGTCTATATTCCGGGCTGCCCGCCGACGCCAGCCGCCACGCTGTACGGCTTCGCCATGGCGCTT
GGCCTGCTGGAGCAGAAAATTCATGCCCGTCTGCCGGGTGAGCTCGACGAACAGCCGACCGAGCTGCTGCATGCCGATAT
GGTGCAGCCTCTGCGGGTGCGCATCGATCGCGAAGCGCGGCGTCTGGCGGGCTACCGCTATGGACGGCAGATTGCCGATG
ACTATATGCGTCTGCTTGGCCAGGGCGACAGCCAGGTGCTGCGCTGGCTGGAGGCGGAGAAAGATCCGCGTCTGACCGAG
ATCGTCACCCATCTCAACCAGGTGGTCGAGGGGGCGCGTATCCGATGA

Upstream 100 bases:

>100_bases
ACCGCGAAAGCTTCGAAACCTGCCCGGAATGCAAGCGCCAGAAATGCCTGGTGCCGTCCGATCGTATTGAACTGACCCGC
CATATGAGGGAGGCCAGCTG

Downstream 100 bases:

>100_bases
GCGAGACGGTGGTGTTCAGTCAGCTGAGCCGTAAATTTATTGATGAGAACGACGCCACGCCGGATCAGGCGCAGCAGGTG
GTCTATTACAGCCTGGCGAT

Product: hydrogenase 3 small subunit

Products: CO2; H2; oxidized ferredoxin + [C]

Alternate protein names: FHL subunit 7; Hydrogenase-3 component G [H]

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MSTLLGPRDENGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHAD
ILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMAL
GLLEQKIHARLPGELDEQPTELLHADMVQPLRVRIDREARRLAGYRYGRQIADDYMRLLGQGDSQVLRWLEAEKDPRLTE
IVTHLNQVVEGARIR

Sequences:

>Translated_255_residues
MSTLLGPRDENGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHAD
ILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMAL
GLLEQKIHARLPGELDEQPTELLHADMVQPLRVRIDREARRLAGYRYGRQIADDYMRLLGQGDSQVLRWLEAEKDPRLTE
IVTHLNQVVEGARIR
>Mature_254_residues
STLLGPRDENGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHADI
LLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALG
LLEQKIHARLPGELDEQPTELLHADMVQPLRVRIDREARRLAGYRYGRQIADDYMRLLGQGDSQVLRWLEAEKDPRLTEI
VTHLNQVVEGARIR

Specific function: Hydrogen metabolism; FHL pathway. [C]

COG id: COG3260

COG function: function code C; Ni,Fe-hydrogenase III small subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I 20 kDa subunit family [H]

Homologues:

Organism=Homo sapiens, GI187281616, Length=151, Percent_Identity=37.0860927152318, Blast_Score=106, Evalue=2e-23,
Organism=Escherichia coli, GI1789074, Length=255, Percent_Identity=92.5490196078431, Blast_Score=491, Evalue=1e-140,
Organism=Escherichia coli, GI1788834, Length=252, Percent_Identity=62.3015873015873, Blast_Score=306, Evalue=6e-85,
Organism=Escherichia coli, GI1788624, Length=122, Percent_Identity=41.8032786885246, Blast_Score=97, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17509685, Length=126, Percent_Identity=40.4761904761905, Blast_Score=104, Evalue=5e-23,
Organism=Drosophila melanogaster, GI18859983, Length=110, Percent_Identity=42.7272727272727, Blast_Score=104, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24642371, Length=110, Percent_Identity=42.7272727272727, Blast_Score=104, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24651058, Length=110, Percent_Identity=43.6363636363636, Blast_Score=102, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006137
- InterPro:   IPR006138
- InterPro:   IPR014406 [H]

Pfam domain/function: PF01058 Oxidored_q6 [H]

EC number: NA

Molecular weight: Translated: 28165; Mature: 28034

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: PS01150 COMPLEX1_20K

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLLGPRDENGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLS
CCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEECC
PLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGG
HHHHHHHCCEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
IFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHARLPGELDEQPT
CEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ELLHADMVQPLRVRIDREARRLAGYRYGRQIADDYMRLLGQGDSQVLRWLEAEKDPRLTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHH
IVTHLNQVVEGARIR
HHHHHHHHHCCCCCC
>Mature Secondary Structure 
STLLGPRDENGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLS
CCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEECC
PLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGG
HHHHHHHCCEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
IFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHARLPGELDEQPT
CEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ELLHADMVQPLRVRIDREARRLAGYRYGRQIADDYMRLLGQGDSQVLRWLEAEKDPRLTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHH
IVTHLNQVVEGARIR
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; Proton; reduced ferredoxin [C]

Specific reaction: formate = CO2 + H2 Proton + reduced ferredoxin = H2 + oxidized ferredoxin [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2187144; 9278503 [H]