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The map label for this gene is ypfE [H]

Identifier: 238895922

GI number: 238895922

Start: 3866173

End: 3866538

Strand: Reverse

Name: ypfE [H]

Synonym: KP1_4047

Alternate gene names: 238895922

Gene position: 3866538-3866173 (Counterclockwise)

Preceding gene: 238895923

Following gene: 238895921

Centisome position: 73.67

GC content: 56.01

Gene sequence:

>366_bases
ATGAGGACAGATTTCAGGGGGCAATCAGTCATGGATAAAGAACGCATTATTCAGGAATTCGTACCAGGCAAACAGGTCAC
ACTGGCGCATCTGATTGCCCACCCGGGAGCGGAGCTGGCGAAAAAGATCGGCGTACCCGAATCCGGCGCGATCGGCATTA
TGACGCTGACGCCGGGAGAAACGGCGATGATCGCCGGCGATCTGGCGATGAAGGCCGCCGACGTGCACATCGGTTTTCTC
GACCGGTTTAGCGGCGCGCTGGTGATCTACGGCTCGGTCGGCGCGGTGGAAGAGGCGCTTCTGCAGACCATCGGCGGATT
AGGCCGCTTATTAAATTATACCTTGTGCGAATTAACGAAAAGTTAA

Upstream 100 bases:

>100_bases
TAATTCCGCCGCAATATTATTTTCTCTCCTGAGTGATCCACTTCACCTTTTAACCCCACTTGCCGAAATTTGTTATTTGC
CGCGCTGAAATGTCGTCACC

Downstream 100 bases:

>100_bases
TTGAGAGCGACCATGAAGCGTATTGCCATTGTCGGCGCCGTCGGTGCAGGAAAAACCACGTTATTTAATGCCCTGCAGGG
GAATTATTCCCTCGCCAGAA

Product: putative carboxysome structural protein in ethanol utilization

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MRTDFRGQSVMDKERIIQEFVPGKQVTLAHLIAHPGAELAKKIGVPESGAIGIMTLTPGETAMIAGDLAMKAADVHIGFL
DRFSGALVIYGSVGAVEEALLQTIGGLGRLLNYTLCELTKS

Sequences:

>Translated_121_residues
MRTDFRGQSVMDKERIIQEFVPGKQVTLAHLIAHPGAELAKKIGVPESGAIGIMTLTPGETAMIAGDLAMKAADVHIGFL
DRFSGALVIYGSVGAVEEALLQTIGGLGRLLNYTLCELTKS
>Mature_121_residues
MRTDFRGQSVMDKERIIQEFVPGKQVTLAHLIAHPGAELAKKIGVPESGAIGIMTLTPGETAMIAGDLAMKAADVHIGFL
DRFSGALVIYGSVGAVEEALLQTIGGLGRLLNYTLCELTKS

Specific function: May be involved in the formation of a specific microcompartment in the cell in which the metabolism of potentially toxic by-products takes place [H]

COG id: COG4810

COG function: function code E; Ethanolamine utilization protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EutS/PduU family [H]

Homologues:

Organism=Escherichia coli, GI87082109, Length=111, Percent_Identity=92.7927927927928, Blast_Score=211, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009307
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 12810; Mature: 12810

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTDFRGQSVMDKERIIQEFVPGKQVTLAHLIAHPGAELAKKIGVPESGAIGIMTLTPGE
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCCC
TAMIAGDLAMKAADVHIGFLDRFSGALVIYGSVGAVEEALLQTIGGLGRLLNYTLCELTK
CEEEEHHHHHHHHHHEEEHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC
S
C
>Mature Secondary Structure
MRTDFRGQSVMDKERIIQEFVPGKQVTLAHLIAHPGAELAKKIGVPESGAIGIMTLTPGE
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCCC
TAMIAGDLAMKAADVHIGFLDRFSGALVIYGSVGAVEEALLQTIGGLGRLLNYTLCELTK
CEEEEHHHHHHHHHHEEEHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]