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The map label for this gene is ydiK [C]

Identifier: 238895753

GI number: 238895753

Start: 3687559

End: 3688668

Strand: Direct

Name: ydiK [C]

Synonym: KP1_3857

Alternate gene names: 238895753

Gene position: 3687559-3688668 (Clockwise)

Preceding gene: 238895752

Following gene: 238895754

Centisome position: 70.26

GC content: 55.14

Gene sequence:

>1110_bases
ATGAGAGTTAATGGACTTACCAAAGGATTTTTCATCCTTATCGTCTTCATTGTAACCCTGGCCTTTTTTGATGTTCTCTC
ACCCTATTATTCCGCCATCCTTTGGGCTGCGATCCTCGCGGTGATTTTTAATCCGGTCAAAAACAAGATCCGTACCCGCC
TCGGCGAGCGCAATGGCCTCGCGGCGCTGATGACCATCGTCATTATCTGTCTTATCGTTTTTACGCCGCTGGCTATCATT
CTCTCCTCGCTGGCCTACGAGCTCAATCTGGTGTACAGCAAACTGCAGCATAACGACACCCAGTTTCCGACGGTGGTCGC
CAGCCTGTTCGCCCATCTCCCCGGCTGGGCCAGAAGCTTCCTCGCCGATCATAACCTTGATAGCGCGCAGCAGATCCAGC
AGCAGCTCTCTGATGCCGCTCTGAAAGGCGGTCAGTATCTGGCCGGCAGCGCGTTTCTGATTGGCAAAGGGACTTTTGGC
TTCACCGTCAGCTTCGGCATCATGCTGTATCTGCTGTTTTTCCTGCTGAAGGATGGACCTTATCTGGTGCTGTTGATCCT
CGAGTCTCTACCGTTATCAAGCTATGTGAAGCAGCATTTGTTCGCTAAATTCGCCGCTGTGGCCCGCGCCACGGTAAAAG
GTACCGTCGCCGTGGCGCTGGCGCAGGGGGCGCTGGGTGGCTTTGCCTTCTGGATCGCCGGTCTGGACGGCAGCATTCTC
TGGGGAGCGCTGATGGCGTTTCTGTCGCTTATCCCGGCGGTGGGCTCGGCCATTATCTGGGTGCCAGCGGCCATCTACCT
CTTCGCCACCGGCCAACTGTGGCAGGGCGCCTTTATCGTCGGCTTCTTTGTGATTGTGATTGGCCTGGTGGATAACATTC
TGCGTCCACTGCTGGTGGGCAAGGATACCAGGATGCCGGACTATCTGATCCTTATCGCCACTCTGGGCGGCATGGAGATC
TACGGTATCAACGGCTTCGTGATCGGGCCGCTGATCGCCGCCCTGTTTATCGCCTGCTGGAACCTGCTGTCGGGACGAGA
ACATGCCGGCAATACCGATGAAATCGATGAAGAGTTTATTGAGGAAGCGAAAAATAGCCGTAATGAATAG

Upstream 100 bases:

>100_bases
TTTCTTCAATGTATCGTGAAGATGTACGACTATCCTGATGGTAAATTACGTCGTAGCATCTATTATTCGACCGTATGACT
CATAAGCAGGAGCGGATAAC

Downstream 100 bases:

>100_bases
CTTTCCCGGCAGGGGGCTGGCGGCCCGCCAGCGCCTCTGCTGCGCTCTGCGCGGCCGATGTCTTACCAGTAGATAACACT
ATTCATTTTGCAAAAATTGG

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MRVNGLTKGFFILIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPVKNKIRTRLGERNGLAALMTIVIICLIVFTPLAII
LSSLAYELNLVYSKLQHNDTQFPTVVASLFAHLPGWARSFLADHNLDSAQQIQQQLSDAALKGGQYLAGSAFLIGKGTFG
FTVSFGIMLYLLFFLLKDGPYLVLLILESLPLSSYVKQHLFAKFAAVARATVKGTVAVALAQGALGGFAFWIAGLDGSIL
WGALMAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLVGKDTRMPDYLILIATLGGMEI
YGINGFVIGPLIAALFIACWNLLSGREHAGNTDEIDEEFIEEAKNSRNE

Sequences:

>Translated_369_residues
MRVNGLTKGFFILIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPVKNKIRTRLGERNGLAALMTIVIICLIVFTPLAII
LSSLAYELNLVYSKLQHNDTQFPTVVASLFAHLPGWARSFLADHNLDSAQQIQQQLSDAALKGGQYLAGSAFLIGKGTFG
FTVSFGIMLYLLFFLLKDGPYLVLLILESLPLSSYVKQHLFAKFAAVARATVKGTVAVALAQGALGGFAFWIAGLDGSIL
WGALMAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLVGKDTRMPDYLILIATLGGMEI
YGINGFVIGPLIAALFIACWNLLSGREHAGNTDEIDEEFIEEAKNSRNE
>Mature_369_residues
MRVNGLTKGFFILIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPVKNKIRTRLGERNGLAALMTIVIICLIVFTPLAII
LSSLAYELNLVYSKLQHNDTQFPTVVASLFAHLPGWARSFLADHNLDSAQQIQQQLSDAALKGGQYLAGSAFLIGKGTFG
FTVSFGIMLYLLFFLLKDGPYLVLLILESLPLSSYVKQHLFAKFAAVARATVKGTVAVALAQGALGGFAFWIAGLDGSIL
WGALMAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLVGKDTRMPDYLILIATLGGMEI
YGINGFVIGPLIAALFIACWNLLSGREHAGNTDEIDEEFIEEAKNSRNE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=357, Percent_Identity=24.9299719887955, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40103; Mature: 40103

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVNGLTKGFFILIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPVKNKIRTRLGERNGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
AALMTIVIICLIVFTPLAIILSSLAYELNLVYSKLQHNDTQFPTVVASLFAHLPGWARSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHH
LADHNLDSAQQIQQQLSDAALKGGQYLAGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGP
HHCCCCCHHHHHHHHHHHHHHCCCCEEECCEEEEECCCHHHHHHHHHHHHHHHHHHCCCC
YLVLLILESLPLSSYVKQHLFAKFAAVARATVKGTVAVALAQGALGGFAFWIAGLDGSIL
CEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
WGALMAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KDTRMPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWNLLSGREHAGNTDEIDEEFI
CCCCCCHHEEHEEHHCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
EEAKNSRNE
HHHHCCCCC
>Mature Secondary Structure
MRVNGLTKGFFILIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPVKNKIRTRLGERNGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
AALMTIVIICLIVFTPLAIILSSLAYELNLVYSKLQHNDTQFPTVVASLFAHLPGWARSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHH
LADHNLDSAQQIQQQLSDAALKGGQYLAGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGP
HHCCCCCHHHHHHHHHHHHHHCCCCEEECCEEEEECCCHHHHHHHHHHHHHHHHHHCCCC
YLVLLILESLPLSSYVKQHLFAKFAAVARATVKGTVAVALAQGALGGFAFWIAGLDGSIL
CEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
WGALMAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KDTRMPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWNLLSGREHAGNTDEIDEEFI
CCCCCCHHEEHEEHHCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
EEAKNSRNE
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]