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The map label for this gene is virB9 [H]

Identifier: 238895551

GI number: 238895551

Start: 3455925

End: 3456833

Strand: Direct

Name: virB9 [H]

Synonym: KP1_3634

Alternate gene names: 238895551

Gene position: 3455925-3456833 (Clockwise)

Preceding gene: 238895550

Following gene: 238895552

Centisome position: 65.85

GC content: 56.22

Gene sequence:

>909_bases
ATGATGAAAAAGTTAACGTTTACCGCACTGGCACTGATGATGTGCGGCGCGGCATGGGGTGCGGCCATACCGCAGGCAAG
CCGCTATGACTCCCGCGTGCAGCAGGTTATCTATAACCCGCAGAACGTCACTGTCGTTAACACCAAACCCGGCTTTATGA
CAACGCTGGTCTTTGATAACGATGAGGCGGTCATAAGCGCCAAACCTGGCTTTGATGAGGCGTGGGAAGCCACGCCGGAT
GCAAACCGGGTCAACGTTCGCCCGGTCGCGCTCACGCAGGGAGCGCCCGAAGAAGATGGCAACACAACGCAGGTCGTGAT
CCCCCCGAACAACCGGGACTGGCATACCAACATGCTGGTTGTCACCAGTAAGCGCCTGTACAACGTCGAGCTGAACGTCA
TCGATGATAAATCGGCACAGCAACCCGCTTTCCAGGTGAGCTATCGCTATCCGGGCGAAGAACGGGACAAAGCGAGCCGG
GAGGCGACGGCCAGACAGCGCGAGTGGGAGCAGAAACAGCAACAAGCCAGCGTCCAGAAAGCGCTGAACTCGGCGCAGAC
GCCCCGCAACTGGAGTTACACCCAATATCCGGGCAAAGACAGTTTCAACATTGTTCCCGATTTTGCTTACGACAATGGCC
GCTTTACGTTCGTGGGCTTCTCCCCGTCTAAGTCCATTCCTTCCGTCACCAAAGAGCTGAACGGCAAAGAGCATGTGGTT
AACAGCGGTATCCAGAAGAAAGGCGACTTCACCGTACTGGTGATTCAGGAGGTGACGCCCCGCCTGGTACTGCGTTCCGG
TAATGCCGTTGTGGGTCTGGAAAATAGCGGATTTGGCAAAGTACACGCCGCCGATGGTTCCACCGTATCCCGGCAGGTGG
AAAGAGTGGAAAAACCAGAATCCAGGTAA

Upstream 100 bases:

>100_bases
CTGACCCTGACAAGGAAATGAGCGATGCGGAACGCGAGATCAACTACCTCGGCTTTACCGTCACCAGCTGGCAGACCGAC
CGCGAAATCCGGGGAGGTGA

Downstream 100 bases:

>100_bases
CCTATAAAAATAGTTTTATATTTTTATAAAAGGGAACGTGCATATGAACGACGAAAACAAAGTGCCTGTGCCGGATGAAG
CGCAGGCATCCCTGGCACAC

Product: type IV secretory pathway VirB9 component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MMKKLTFTALALMMCGAAWGAAIPQASRYDSRVQQVIYNPQNVTVVNTKPGFMTTLVFDNDEAVISAKPGFDEAWEATPD
ANRVNVRPVALTQGAPEEDGNTTQVVIPPNNRDWHTNMLVVTSKRLYNVELNVIDDKSAQQPAFQVSYRYPGEERDKASR
EATARQREWEQKQQQASVQKALNSAQTPRNWSYTQYPGKDSFNIVPDFAYDNGRFTFVGFSPSKSIPSVTKELNGKEHVV
NSGIQKKGDFTVLVIQEVTPRLVLRSGNAVVGLENSGFGKVHAADGSTVSRQVERVEKPESR

Sequences:

>Translated_302_residues
MMKKLTFTALALMMCGAAWGAAIPQASRYDSRVQQVIYNPQNVTVVNTKPGFMTTLVFDNDEAVISAKPGFDEAWEATPD
ANRVNVRPVALTQGAPEEDGNTTQVVIPPNNRDWHTNMLVVTSKRLYNVELNVIDDKSAQQPAFQVSYRYPGEERDKASR
EATARQREWEQKQQQASVQKALNSAQTPRNWSYTQYPGKDSFNIVPDFAYDNGRFTFVGFSPSKSIPSVTKELNGKEHVV
NSGIQKKGDFTVLVIQEVTPRLVLRSGNAVVGLENSGFGKVHAADGSTVSRQVERVEKPESR
>Mature_302_residues
MMKKLTFTALALMMCGAAWGAAIPQASRYDSRVQQVIYNPQNVTVVNTKPGFMTTLVFDNDEAVISAKPGFDEAWEATPD
ANRVNVRPVALTQGAPEEDGNTTQVVIPPNNRDWHTNMLVVTSKRLYNVELNVIDDKSAQQPAFQVSYRYPGEERDKASR
EATARQREWEQKQQQASVQKALNSAQTPRNWSYTQYPGKDSFNIVPDFAYDNGRFTFVGFSPSKSIPSVTKELNGKEHVV
NSGIQKKGDFTVLVIQEVTPRLVLRSGNAVVGLENSGFGKVHAADGSTVSRQVERVEKPESR

Specific function: Unknown

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbG/virB9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010258
- InterPro:   IPR014148 [H]

Pfam domain/function: PF03524 CagX [H]

EC number: NA

Molecular weight: Translated: 33556; Mature: 33556

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKLTFTALALMMCGAAWGAAIPQASRYDSRVQQVIYNPQNVTVVNTKPGFMTTLVFDN
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEC
DEAVISAKPGFDEAWEATPDANRVNVRPVALTQGAPEEDGNTTQVVIPPNNRDWHTNMLV
CCEEEEECCCCCHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEE
VTSKRLYNVELNVIDDKSAQQPAFQVSYRYPGEERDKASREATARQREWEQKQQQASVQK
EEECEEEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALNSAQTPRNWSYTQYPGKDSFNIVPDFAYDNGRFTFVGFSPSKSIPSVTKELNGKEHVV
HHHHCCCCCCCCCCCCCCCCCCEECCCEEECCCEEEEEEECCCCCCCHHHHHCCCHHHHH
NSGIQKKGDFTVLVIQEVTPRLVLRSGNAVVGLENSGFGKVHAADGSTVSRQVERVEKPE
HCCCCCCCCEEEEEEECCCCEEEEECCCEEEEECCCCCCEEEECCCCHHHHHHHHHCCCC
SR
CC
>Mature Secondary Structure
MMKKLTFTALALMMCGAAWGAAIPQASRYDSRVQQVIYNPQNVTVVNTKPGFMTTLVFDN
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEC
DEAVISAKPGFDEAWEATPDANRVNVRPVALTQGAPEEDGNTTQVVIPPNNRDWHTNMLV
CCEEEEECCCCCHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEE
VTSKRLYNVELNVIDDKSAQQPAFQVSYRYPGEERDKASREATARQREWEQKQQQASVQK
EEECEEEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALNSAQTPRNWSYTQYPGKDSFNIVPDFAYDNGRFTFVGFSPSKSIPSVTKELNGKEHVV
HHHHCCCCCCCCCCCCCCCCCCEECCCEEECCCEEEEEEECCCCCCCHHHHHCCCHHHHH
NSGIQKKGDFTVLVIQEVTPRLVLRSGNAVVGLENSGFGKVHAADGSTVSRQVERVEKPE
HCCCCCCCCEEEEEEECCCCEEEEECCCEEEEECCCCCCEEEECCCCHHHHHHHHHCCCC
SR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]