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The map label for this gene is yhdH [H]

Identifier: 238895503

GI number: 238895503

Start: 3389929

End: 3390906

Strand: Reverse

Name: yhdH [H]

Synonym: KP1_3576

Alternate gene names: 238895503

Gene position: 3390906-3389929 (Counterclockwise)

Preceding gene: 238895504

Following gene: 238895502

Centisome position: 64.61

GC content: 62.68

Gene sequence:

>978_bases
ATGAAAGCATTAGTTCTGGACCAGATCGACAACCGCACCGTCGCCACCGTCAAAGATATCGACCTGCCCGCTCTTGCCGA
AGGCGACGTCCGGGTCGCCATCGACTGGTCGAGTCTCAATTATAAAGACGCCCTGGCGATCACCGGCAAAGGCAAAATTA
TCCGTCAGTTTCCGATGGTGCCGGGCATTGATTTTGCCGGTCAGGTGAAAGAAAGCCGCGATCCGCGCTTTGTTCCCGGC
CAGGCCGTGATCCTCACCGGCTGGGGCGTGGGCGAAAACCACTGGGGTGGCCTGGCCACCGAAGCCTGCGTTAAAGGCGA
CTGGCTGGTTGCTCTGCCGGAGACGCTCAGCGCGCGCCAGGCAATGATCATCGGCACCGCCGGCTTTACCGCGATGCTAT
GCGTTGATGCTCTCGTTAGTGCGGGTGTCACCCCTGACAGCGGGGATATCCTGGTCACCGGCGCCAGCGGCGGGGTCGGC
AGCACCGCCGTGGTGTTGCTGAAAGCCCTTGGCTACCGGGTGACGGCCGTATCGGGCCGGGAATCGACACACGATTACCT
TCGCCAGCTGGGCGCCGATACGATCCTGCCGCGCAGCGACTTCGCGGAGACCCGTCCGCTGGAGAAACAGCTGTGGGCGG
GCGCGGTGGATACCGTTGGCGGCCCGGTGTTGGCCAAAGTGCTGGCGCAAACGCAATATCGCGGCTGCGTCGCCGCCTGC
GGTCTGGCCGGGGGCTTCGATCTGCCGACCACCGTGATGCCGTTTATTTTGCGCAATGTGCGTCTGCAGGGGGTGGATTC
GGTGATGGTGCCGACCGCTGAACGCGACGCCGTCTGGCAGCGTCTGGCCCAGCTTCTGCCGGAGAGCTACTACCAGCAGG
CGGCCACTGAAATCACGCTGGAGCAGGCGCCAGCGTATGCCGCAGATTTCCTCAGCAATAATATTCATGGTCGGACGCTG
GTCAATATCGGCCAGTAA

Upstream 100 bases:

>100_bases
ACCAGTACTGGGATTTTTTTGCGCACAGTATGACAACAAAAACACCTGCACAGGACGGCGCTAGCGCCGATAACCCCCTT
CCGACGAGGAATACTCTGTC

Downstream 100 bases:

>100_bases
TCCTCTTCTCCCGGCGCCCGTGCGGCGCCGGATCCCGAGAGGGATCAAGGCATATCATTTCCTTCCCCACGGGATTATGA
TGACGCGAACAAATAGCTCT

Product: putative dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MKALVLDQIDNRTVATVKDIDLPALAEGDVRVAIDWSSLNYKDALAITGKGKIIRQFPMVPGIDFAGQVKESRDPRFVPG
QAVILTGWGVGENHWGGLATEACVKGDWLVALPETLSARQAMIIGTAGFTAMLCVDALVSAGVTPDSGDILVTGASGGVG
STAVVLLKALGYRVTAVSGRESTHDYLRQLGADTILPRSDFAETRPLEKQLWAGAVDTVGGPVLAKVLAQTQYRGCVAAC
GLAGGFDLPTTVMPFILRNVRLQGVDSVMVPTAERDAVWQRLAQLLPESYYQQAATEITLEQAPAYAADFLSNNIHGRTL
VNIGQ

Sequences:

>Translated_325_residues
MKALVLDQIDNRTVATVKDIDLPALAEGDVRVAIDWSSLNYKDALAITGKGKIIRQFPMVPGIDFAGQVKESRDPRFVPG
QAVILTGWGVGENHWGGLATEACVKGDWLVALPETLSARQAMIIGTAGFTAMLCVDALVSAGVTPDSGDILVTGASGGVG
STAVVLLKALGYRVTAVSGRESTHDYLRQLGADTILPRSDFAETRPLEKQLWAGAVDTVGGPVLAKVLAQTQYRGCVAAC
GLAGGFDLPTTVMPFILRNVRLQGVDSVMVPTAERDAVWQRLAQLLPESYYQQAATEITLEQAPAYAADFLSNNIHGRTL
VNIGQ
>Mature_325_residues
MKALVLDQIDNRTVATVKDIDLPALAEGDVRVAIDWSSLNYKDALAITGKGKIIRQFPMVPGIDFAGQVKESRDPRFVPG
QAVILTGWGVGENHWGGLATEACVKGDWLVALPETLSARQAMIIGTAGFTAMLCVDALVSAGVTPDSGDILVTGASGGVG
STAVVLLKALGYRVTAVSGRESTHDYLRQLGADTILPRSDFAETRPLEKQLWAGAVDTVGGPVLAKVLAQTQYRGCVAAC
GLAGGFDLPTTVMPFILRNVRLQGVDSVMVPTAERDAVWQRLAQLLPESYYQQAATEITLEQAPAYAADFLSNNIHGRTL
VNIGQ

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789651, Length=323, Percent_Identity=70.8978328173375, Blast_Score=470, Evalue=1e-134,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR014188 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 34475; Mature: 34475

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALVLDQIDNRTVATVKDIDLPALAEGDVRVAIDWSSLNYKDALAITGKGKIIRQFPMV
CCCEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEECCCC
PGIDFAGQVKESRDPRFVPGQAVILTGWGVGENHWGGLATEACVKGDWLVALPETLSARQ
CCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCEEEECCCHHCCCE
AMIIGTAGFTAMLCVDALVSAGVTPDSGDILVTGASGGVGSTAVVLLKALGYRVTAVSGR
EEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEECCC
ESTHDYLRQLGADTILPRSDFAETRPLEKQLWAGAVDTVGGPVLAKVLAQTQYRGCVAAC
CHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHH
GLAGGFDLPTTVMPFILRNVRLQGVDSVMVPTAERDAVWQRLAQLLPESYYQQAATEITL
CCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEH
EQAPAYAADFLSNNIHGRTLVNIGQ
HHCCHHHHHHHCCCCCCCEEEECCC
>Mature Secondary Structure
MKALVLDQIDNRTVATVKDIDLPALAEGDVRVAIDWSSLNYKDALAITGKGKIIRQFPMV
CCCEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEECCCC
PGIDFAGQVKESRDPRFVPGQAVILTGWGVGENHWGGLATEACVKGDWLVALPETLSARQ
CCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCEEEECCCHHCCCE
AMIIGTAGFTAMLCVDALVSAGVTPDSGDILVTGASGGVGSTAVVLLKALGYRVTAVSGR
EEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEECCC
ESTHDYLRQLGADTILPRSDFAETRPLEKQLWAGAVDTVGGPVLAKVLAQTQYRGCVAAC
CHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHH
GLAGGFDLPTTVMPFILRNVRLQGVDSVMVPTAERDAVWQRLAQLLPESYYQQAATEITL
CCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEH
EQAPAYAADFLSNNIHGRTLVNIGQ
HHCCHHHHHHHCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1370469; 9278503 [H]