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The map label for this gene is yobA [H]

Identifier: 238895419

GI number: 238895419

Start: 3305888

End: 3306271

Strand: Reverse

Name: yobA [H]

Synonym: KP1_3486

Alternate gene names: 238895419

Gene position: 3306271-3305888 (Counterclockwise)

Preceding gene: 238895422

Following gene: 238895418

Centisome position: 62.99

GC content: 60.68

Gene sequence:

>384_bases
ATGACGAATATGCGACTTCTTGCTGGACGCGCGTTGCGCCTCTCCGTTGCGCTTGCCGGGATGTTAACCGCGGCGGGCGC
CTTCGCCCACGCTCACCTGCAGCAGCAGATCCCGACCGCCGGGGCGCAGCTTTCAGCTTCCCCACAGACGCTGACGCTCA
GTTTTTCCGAAGGTATTGAACCCGCATTCAGCGGCGTGACCGTCACCGGTCCGCAGCAGCATGCGGTGGCTACCGGAAAA
CTGACCCGCAGCGCCGATAATCCGGCCGAGGTCACGTTACCTTTGGCGGAAGCCTTGCCGCCGGGAGAGTACACCGTGGC
ATGGCATGTGGTCTCGGTGGATGGTCATAAAACCAAAGGGCAATATACCTTTAGCGTGAAGTAA

Upstream 100 bases:

>100_bases
CCACTCCACTCTGCTTATAAATCCGGTCAGGGCCAGATGCCTGGCTCGACTCTGGCATTATACAGGGTTATTCTCTGTGC
TACAGACATAACAAAAGGGA

Downstream 100 bases:

>100_bases
GCGATGCTGACCGGGCTCTATATTACCCTGCGCTTTGGGCACTTTATCTCCCTGATGCTGGCTTTTGGCTGCGTGCTGTA
TGGCGCCTGGTGGGCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTNMRLLAGRALRLSVALAGMLTAAGAFAHAHLQQQIPTAGAQLSASPQTLTLSFSEGIEPAFSGVTVTGPQQHAVATGK
LTRSADNPAEVTLPLAEALPPGEYTVAWHVVSVDGHKTKGQYTFSVK

Sequences:

>Translated_127_residues
MTNMRLLAGRALRLSVALAGMLTAAGAFAHAHLQQQIPTAGAQLSASPQTLTLSFSEGIEPAFSGVTVTGPQQHAVATGK
LTRSADNPAEVTLPLAEALPPGEYTVAWHVVSVDGHKTKGQYTFSVK
>Mature_126_residues
TNMRLLAGRALRLSVALAGMLTAAGAFAHAHLQQQIPTAGAQLSASPQTLTLSFSEGIEPAFSGVTVTGPQQHAVATGKL
TRSADNPAEVTLPLAEALPPGEYTVAWHVVSVDGHKTKGQYTFSVK

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopC family [H]

Homologues:

Organism=Escherichia coli, GI1788146, Length=119, Percent_Identity=52.1008403361345, Blast_Score=129, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC [H]

EC number: NA

Molecular weight: Translated: 13191; Mature: 13060

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNMRLLAGRALRLSVALAGMLTAAGAFAHAHLQQQIPTAGAQLSASPQTLTLSFSEGIE
CCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEECCCCCC
PAFSGVTVTGPQQHAVATGKLTRSADNPAEVTLPLAEALPPGEYTVAWHVVSVDGHKTKG
CCCCCEEEECCCCCEEEECCEECCCCCCCEEEEEHHHCCCCCCEEEEEEEEEECCCCCCC
QYTFSVK
EEEEEEC
>Mature Secondary Structure 
TNMRLLAGRALRLSVALAGMLTAAGAFAHAHLQQQIPTAGAQLSASPQTLTLSFSEGIE
CCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEECCCCCC
PAFSGVTVTGPQQHAVATGKLTRSADNPAEVTLPLAEALPPGEYTVAWHVVSVDGHKTKG
CCCCCEEEECCCCCEEEECCEECCCCCCCEEEEEHHHCCCCCCEEEEEEEEEECCCCCCC
QYTFSVK
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]