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The map label for this gene is yebR [H]

Identifier: 238895408

GI number: 238895408

Start: 3295285

End: 3295839

Strand: Reverse

Name: yebR [H]

Synonym: KP1_3475

Alternate gene names: 238895408

Gene position: 3295839-3295285 (Counterclockwise)

Preceding gene: 238895414

Following gene: 238895407

Centisome position: 62.8

GC content: 55.5

Gene sequence:

>555_bases
ATGCTTATTTTAGTAGGCTGTACGTATCAGGCAGTAAGACAACAAAGTGAAGATATAATGAGCAAAACAGAATTTTACGC
GGATCTGAACCGCGATTTCCAGGCATTAATGGCAGGTGAAACCAGTTTTCTGGCGATGATCGCCAATACCAGCGCGCTGC
TGTTCGAGCGGCTGAGCGAGGTCAACTGGGCCGGTTTCTACCTTCTGGAAGGCGATACCCTGGTGTTGGGACCGTTCCAG
GGCAAACTGGCCTGCGTGCGGATCCCGGTCGGGCGAGGCGTATGCGGCGCGGCGGTGGCGCAGGCTCAGGTCCAGCGCGT
CGAGGACGTCCACGCCTTTGACGGCCACATTGCCTGCGATGCCGCCAGTAATTCGGAAATTGTCTTCCCTCTGCGCGTGA
ATGGCCAGATTATCGGCGTGCTGGATATCGATAGTCCGGCTTACGGGCGCTTCACCGCTGAAGATGAGCAGGGGTTGCGC
ACGCTGGTCGAGCATCTGGAAAAACTCATTGCGGCCACGGATTATCAAAAAATCTTTACCCGTGTCGTGGGATAA

Upstream 100 bases:

>100_bases
TGAGGGTGGGTGTTTTTATCGGCATTTATTACGTACAGGAATGAATGTATCTCACTATCTTAACCTATGAATGAATTCAT
CTTGAGCCCAAGCGCATTTA

Downstream 100 bases:

>100_bases
TCAACGGATAACGTAGCATTTAGCGAGGACGTCATTATAATGTCGCCTGTTCATGCCTGCGGCTTGTTGGCTACGTCCGT
TGTAATCAGGAAATTTCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MLILVGCTYQAVRQQSEDIMSKTEFYADLNRDFQALMAGETSFLAMIANTSALLFERLSEVNWAGFYLLEGDTLVLGPFQ
GKLACVRIPVGRGVCGAAVAQAQVQRVEDVHAFDGHIACDAASNSEIVFPLRVNGQIIGVLDIDSPAYGRFTAEDEQGLR
TLVEHLEKLIAATDYQKIFTRVVG

Sequences:

>Translated_184_residues
MLILVGCTYQAVRQQSEDIMSKTEFYADLNRDFQALMAGETSFLAMIANTSALLFERLSEVNWAGFYLLEGDTLVLGPFQ
GKLACVRIPVGRGVCGAAVAQAQVQRVEDVHAFDGHIACDAASNSEIVFPLRVNGQIIGVLDIDSPAYGRFTAEDEQGLR
TLVEHLEKLIAATDYQKIFTRVVG
>Mature_184_residues
MLILVGCTYQAVRQQSEDIMSKTEFYADLNRDFQALMAGETSFLAMIANTSALLFERLSEVNWAGFYLLEGDTLVLGPFQ
GKLACVRIPVGRGVCGAAVAQAQVQRVEDVHAFDGHIACDAASNSEIVFPLRVNGQIIGVLDIDSPAYGRFTAEDEQGLR
TLVEHLEKLIAATDYQKIFTRVVG

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=165, Percent_Identity=79.3939393939394, Blast_Score=279, Evalue=1e-76,
Organism=Saccharomyces cerevisiae, GI6322781, Length=157, Percent_Identity=38.8535031847134, Blast_Score=117, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 20134; Mature: 20134

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILVGCTYQAVRQQSEDIMSKTEFYADLNRDFQALMAGETSFLAMIANTSALLFERLSE
CEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCHHHHHHHHHH
VNWAGFYLLEGDTLVLGPFQGKLACVRIPVGRGVCGAAVAQAQVQRVEDVHAFDGHIACD
CCCCEEEEEECCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE
AASNSEIVFPLRVNGQIIGVLDIDSPAYGRFTAEDEQGLRTLVEHLEKLIAATDYQKIFT
CCCCCEEEEEEEECCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
RVVG
HHCC
>Mature Secondary Structure
MLILVGCTYQAVRQQSEDIMSKTEFYADLNRDFQALMAGETSFLAMIANTSALLFERLSE
CEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCHHHHHHHHHH
VNWAGFYLLEGDTLVLGPFQGKLACVRIPVGRGVCGAAVAQAQVQRVEDVHAFDGHIACD
CCCCEEEEEECCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE
AASNSEIVFPLRVNGQIIGVLDIDSPAYGRFTAEDEQGLRTLVEHLEKLIAATDYQKIFT
CCCCCEEEEEEEECCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
RVVG
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10493123 [H]