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The map label for this gene is dsbB [H]

Identifier: 238895372

GI number: 238895372

Start: 3260980

End: 3261510

Strand: Direct

Name: dsbB [H]

Synonym: KP1_3438

Alternate gene names: 238895372

Gene position: 3260980-3261510 (Clockwise)

Preceding gene: 238895371

Following gene: 238895373

Centisome position: 62.13

GC content: 57.25

Gene sequence:

>531_bases
ATGTTGCAATATTTAAACCAGTGCTCAAGAGGACGCGGTGCCTGGCTCCTGATGGCGTTGACCGCTTTTATTCTCGAACT
TGTCGCGCTGTGGTTCCAGCACGTGATGCTGCTGCAGCCGTGTGTCATGTGTATTTACGAACGCTGCGCGCTGTTCGGCA
TCATGGGCGCGGGACTGGTGGGCGCTATCGCCCCCAAAACGCCGCTGCGCTATGTCGCCATGGCAATCTGGTTGTACAGC
GCGATACGCGGACTACAGCTGGCGTGGGAGCATACGATGATCCAGCTGCACCCTTCACCGTTCCAGACCTGCGATTTCGC
CGCCCGCTTCCCAACCTGGCTGCCGCTGGATAAATGGCTGCCGCAGGTTTTCGTTGCGTCCGGAGACTGTTCAGTACGTC
AGTGGCAGTTCCTGTCGCTGGAGATGCCGCAATGGCTGGTGGGGATTTTCGCCGCCTATCTGCTGGTCGCTATTCTGGCG
ATCGTTGCTCAGCCTTTCAAAGCGAAAAAACGCGATCTGTTTGGTCGTTAA

Upstream 100 bases:

>100_bases
GCATCAATAACCCGTTACGGAATATTTTCCGCCGCGCCTCTGGCGTCGGTTCGGTTTTCGTTTACACTGCCATGATTTAG
CATCTTCCAGGGAAATGATT

Downstream 100 bases:

>100_bases
GCCGCGGCAAGTACAGCCCACAATGAAACGCCCTGCGGGGCGTTTTTTTATGCCTCCTGCGCATCACTGAATCGTTTCAT
GTCTATGGTTGACCACAGCT

Product: disulfide bond formation protein B

Products: NA

Alternate protein names: Disulfide oxidoreductase [H]

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MLQYLNQCSRGRGAWLLMALTAFILELVALWFQHVMLLQPCVMCIYERCALFGIMGAGLVGAIAPKTPLRYVAMAIWLYS
AIRGLQLAWEHTMIQLHPSPFQTCDFAARFPTWLPLDKWLPQVFVASGDCSVRQWQFLSLEMPQWLVGIFAAYLLVAILA
IVAQPFKAKKRDLFGR

Sequences:

>Translated_176_residues
MLQYLNQCSRGRGAWLLMALTAFILELVALWFQHVMLLQPCVMCIYERCALFGIMGAGLVGAIAPKTPLRYVAMAIWLYS
AIRGLQLAWEHTMIQLHPSPFQTCDFAARFPTWLPLDKWLPQVFVASGDCSVRQWQFLSLEMPQWLVGIFAAYLLVAILA
IVAQPFKAKKRDLFGR
>Mature_176_residues
MLQYLNQCSRGRGAWLLMALTAFILELVALWFQHVMLLQPCVMCIYERCALFGIMGAGLVGAIAPKTPLRYVAMAIWLYS
AIRGLQLAWEHTMIQLHPSPFQTCDFAARFPTWLPLDKWLPQVFVASGDCSVRQWQFLSLEMPQWLVGIFAAYLLVAILA
IVAQPFKAKKRDLFGR

Specific function: Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein [H]

COG id: COG1495

COG function: function code O; Disulfide bond formation protein DsbB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbB family [H]

Homologues:

Organism=Escherichia coli, GI1787433, Length=176, Percent_Identity=78.9772727272727, Blast_Score=303, Evalue=6e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003752
- InterPro:   IPR022920 [H]

Pfam domain/function: PF02600 DsbB [H]

EC number: NA

Molecular weight: Translated: 20037; Mature: 20037

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQYLNQCSRGRGAWLLMALTAFILELVALWFQHVMLLQPCVMCIYERCALFGIMGAGLV
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIAPKTPLRYVAMAIWLYSAIRGLQLAWEHTMIQLHPSPFQTCDFAARFPTWLPLDKWL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHCCCCCCHHHHH
PQVFVASGDCSVRQWQFLSLEMPQWLVGIFAAYLLVAILAIVAQPFKAKKRDLFGR
HHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
>Mature Secondary Structure
MLQYLNQCSRGRGAWLLMALTAFILELVALWFQHVMLLQPCVMCIYERCALFGIMGAGLV
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIAPKTPLRYVAMAIWLYSAIRGLQLAWEHTMIQLHPSPFQTCDFAARFPTWLPLDKWL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHCCCCCCHHHHH
PQVFVASGDCSVRQWQFLSLEMPQWLVGIFAAYLLVAILAIVAQPFKAKKRDLFGR
HHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA